Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0178900-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:4151000:4156036:-1 gene:Os07g0178900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATTIP49A/RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1); protein binding. (Os07t0178900-01)
Sequence	ATGAGGATCGAGGAGGTGCAGTCGACGACGAAGAAGCAGAGGATCGCGACGCACACCCAC ATAAAGGGCCTCGGCCTCGACGCGAATGGGGCGGCGATAGGGTTGGCGGCGGGGTTCGTG GGGCAGGGGGCGGCGAGGGAGGCTGCCGGGCTGGTGGTCGACATGATTCGCCAGAAGAAG ATGGCCGGGCGCGCGCTGCTTCTCGCCGGCCCGCCCGCCACCGGCAAGACGGCTCTCGCT CTCGGCATCTCCCAGGAGCTCGGTAGTAAGGTCCCTTTCTGTCCTATGGTAGGATCAGAA GTGTATTCCTCAGAGGTCAAGAAAACTGAGGTGCTAATGGAGAATTTCCGTAGAGCTATA GGTTTGCGTATAAAAGAAAATAAAGAGGTCTACGAAGGAGAGGTTACTGAACTTTCCCCA GAAGAGGCTGAGAGTACAACAGGTGGATATGGAAAAAGCATTAGCCATGTAATCATAGGT CTGAAGACTGTAAAAGGGACTAAGCAACTGAAGCTAGATCCTACAATTTATGATGCTTTA ATAAAGGAAAAGGTGTCAGTGGGTGATGTTATATACATTGAAGCTAATAGTGGTGCGGTC AAAAGAGTTGGTAGATGTGATGCTTTTGCTACAGAATACGATCTTGAAGCTGAGGAGTAT GTTCCAATCCCCAAAGGGGAGGTCCATAAGAAGAAGGAAATAGTGCAGGATGTTACGCTT CATGACCTTGATGCTGCAAATGCTCAACCACAAGGAGGCCAAGATATTTTGTCCCTTATG GGACAGATGATGAAGCCACGGAAAACTGAAATCACTGAGAAGCTACGACAAGAAATCAAT AAGGTGGTTAACAGATATATTGATGAAGGAATTGCTGAGCTTGTACCTGGTGTTCTGTTC ATTGACGAGGTCCACATGTTAGACATTGAATGCTTCTCTTATCTTAATCGTGCTTTGGAG AGCCCATTATCACCAATTGTGATACTTGCTACGAACAGAGGAATATGTAACGTAAGAGGA ACTGATATGACAAGTCCACATGGTATACCAGTTGATCTTCTAGACAGATTGGTGATTATT CGAACAGAAACATATGGTCCCACTGAGATGATCCAGATACTTGCTATTAGAGCGCAGGTG GAAGAGATTGACATTGATGAAGAAAGTCTCGCATTTTTAGGAGAGATTGGACAACAGACA TCTTTGAGGCATGCTATTCAGTTGCTATCACCCGCCAGTGTAGTTGCAAAGGCTAATGGG AGAGAGAAGATCAGCAAGGCCGATCTTGAGGAAGTCAGTGCTCTGTATTTGGACGCTAAA TCATCGGCTCGTCTCCTTCAGGAGCAGCAAGGAAGATACATTACTTAA

Peptide Sequence

PEP ID	Os07t0178900-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:4151000:4156036:-1 gene:Os07g0178900 transcript:Os07t0178900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATTIP49A/RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1); protein binding. (Os07t0178900-01)
Sequence	MRIEEVQSTTKKQRIATHTHIKGLGLDANGAAIGLAAGFVGQGAAREAAGLVVDMIRQKK MAGRALLLAGPPATGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAI GLRIKENKEVYEGEVTELSPEEAESTTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDAL IKEKVSVGDVIYIEANSGAVKRVGRCDAFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTL HDLDAANAQPQGGQDILSLMGQMMKPRKTEITEKLRQEINKVVNRYIDEGIAELVPGVLF IDEVHMLDIECFSYLNRALESPLSPIVILATNRGICNVRGTDMTSPHGIPVDLLDRLVII RTETYGPTEMIQILAIRAQVEEIDIDEESLAFLGEIGQQTSLRHAIQLLSPASVVAKANG REKISKADLEEVSALYLDAKSSARLLQEQQGRYIT

Transcript Sequence

Transcript ID	Os07t0178900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:4151000:4156036:-1 gene:Os07g0178900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ATTIP49A/RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1); protein binding. (Os07t0178900-01)
Sequence	CTCGCTCGCAGTCGCAGCTCACCAGCCGCCGCCCAGGTCGCCGCCGCGCCGCCGCTCGCT CGTAGCTCCGCACGTGCGTCGCTGCGCCACCGGCCGGCCACCGTCGTTGCGGTGGGGGAG AGGGAGGGAGGCGGAGAGACAGGAAGCGGCGGCGGCGGCGGCGGCGGCGATGAGGATCGA GGAGGTGCAGTCGACGACGAAGAAGCAGAGGATCGCGACGCACACCCACATAAAGGGCCT CGGCCTCGACGCGAATGGGGCGGCGATAGGGTTGGCGGCGGGGTTCGTGGGGCAGGGGGC GGCGAGGGAGGCTGCCGGGCTGGTGGTCGACATGATTCGCCAGAAGAAGATGGCCGGGCG CGCGCTGCTTCTCGCCGGCCCGCCCGCCACCGGCAAGACGGCTCTCGCTCTCGGCATCTC CCAGGAGCTCGGTAGTAAGGTCCCTTTCTGTCCTATGGTAGGATCAGAAGTGTATTCCTC AGAGGTCAAGAAAACTGAGGTGCTAATGGAGAATTTCCGTAGAGCTATAGGTTTGCGTAT AAAAGAAAATAAAGAGGTCTACGAAGGAGAGGTTACTGAACTTTCCCCAGAAGAGGCTGA GAGTACAACAGGTGGATATGGAAAAAGCATTAGCCATGTAATCATAGGTCTGAAGACTGT AAAAGGGACTAAGCAACTGAAGCTAGATCCTACAATTTATGATGCTTTAATAAAGGAAAA GGTGTCAGTGGGTGATGTTATATACATTGAAGCTAATAGTGGTGCGGTCAAAAGAGTTGG TAGATGTGATGCTTTTGCTACAGAATACGATCTTGAAGCTGAGGAGTATGTTCCAATCCC CAAAGGGGAGGTCCATAAGAAGAAGGAAATAGTGCAGGATGTTACGCTTCATGACCTTGA TGCTGCAAATGCTCAACCACAAGGAGGCCAAGATATTTTGTCCCTTATGGGACAGATGAT GAAGCCACGGAAAACTGAAATCACTGAGAAGCTACGACAAGAAATCAATAAGGTGGTTAA CAGATATATTGATGAAGGAATTGCTGAGCTTGTACCTGGTGTTCTGTTCATTGACGAGGT CCACATGTTAGACATTGAATGCTTCTCTTATCTTAATCGTGCTTTGGAGAGCCCATTATC ACCAATTGTGATACTTGCTACGAACAGAGGAATATGTAACGTAAGAGGAACTGATATGAC AAGTCCACATGGTATACCAGTTGATCTTCTAGACAGATTGGTGATTATTCGAACAGAAAC ATATGGTCCCACTGAGATGATCCAGATACTTGCTATTAGAGCGCAGGTGGAAGAGATTGA CATTGATGAAGAAAGTCTCGCATTTTTAGGAGAGATTGGACAACAGACATCTTTGAGGCA TGCTATTCAGTTGCTATCACCCGCCAGTGTAGTTGCAAAGGCTAATGGGAGAGAGAAGAT CAGCAAGGCCGATCTTGAGGAAGTCAGTGCTCTGTATTTGGACGCTAAATCATCGGCTCG TCTCCTTCAGGAGCAGCAAGGAAGATACATTACTTAAATTTCTCTTGCAGTATGACGATA AACTCGAGAATTTGTCCCTATTCATGCTGTACACAGGTGCGAAGACTCTTTCAGGAGCAC ACTTGATTGATTTTTGCAGAAATGTAGAAACTGAACAATGTACCCCTGCACTGTAGGCAG CCTCTAGAGAATAGCAGCATTTTCGAAGTATTGCTTGTTCAAACTACTGTTTGCTGAGTA GATCTCCTATGGAATTATCGTGTTTCTTAATTGTCCATGCTAACCAGTAGTTTGATACTG TTTTATCTAATGAGCATTTTCATGTC