Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0176900-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:4068003:4070078:-1 gene:Os07g0176900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribose-5-phosphate isomerase precursor (EC 5.3.1.6). (Os07t0176900-01);Similar to ribose-5-phosphate isomerase. (Os07t0176900-02)
Sequence	ACGCCTCATCGACCTCCCAAGAACCACCACCGCCTTCTCCCATGGCCGCCGCCACCGTCT CCGTCCGCTTCCACCCGGCCGCATCCGCCGCGCGCTGCGGCGGCGGCGGCGCTGACGCAG GACGACCTGAAGAGGCTGGCGGCGGTGCGCGCGGTGGAGCAGGTGGAGAGCGGGATGGTG CTGGGGCTGGGGACCGGGTCGACGGCGGCCTTCGCCGTCGCGGAGATCGGGGCGCTGCTG GCGTCCGGGAAGCTGAGCGGCATCGTCGGGGTGCCCACCTCCAAGCGCACGTTCGAGCAG GCGCAGTCGCTCGGCATCCCGCTCTCCACCCTCGACGACCACCCCCGCATCGACCTCGCC ATCGACGGCGCCGACGAGGTCGATCCAGACCTTAACCTTGTGAAAGGGAGAGGTGGTGCC CTTCTCCGGGAGAAGATGGTTGAGGCAGCATCAGACAAGTTCATCGTTGTTGTTGACGAG ACAAAGCTAGTTACCGGCTTAGGAGGGAGTGGTCTAGCCATGCCTGTGGAGGTTGTGCAG TTCTGCTGGAAGTACAACCAAGTGAGATTGCAGGATCTGTTTAACGATGAAGGATGCGAG GCGAAGCTGAGATTGGATGAAGGCGGCAAACCCTACGTTACCGACAACTCAAACTACATC GTTGATTTATACTTCAAGACGCCGATCAAGGATGCGTTGGCAGCAGGGAAGGAGATCTCA GCTTTGGAAGGCGTCGTTGAGCATGGGCTGTTCCTGGACATGGCGACTTCGGTGATCATC GCTGGAACAGATGGCGTCAGTGTCAAAACAAAGTGA

Peptide Sequence

PEP ID	Os07t0176900-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:4068003:4070078:-1 gene:Os07g0176900 transcript:Os07t0176900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribose-5-phosphate isomerase precursor (EC 5.3.1.6). (Os07t0176900-01);Similar to ribose-5-phosphate isomerase. (Os07t0176900-02)
Sequence	TPHRPPKNHHRLLPWPPPPSPSASTRPHPPRAAAAAALTQDDLKRLAAVRAVEQVESGMV LGLGTGSTAAFAVAEIGALLASGKLSGIVGVPTSKRTFEQAQSLGIPLSTLDDHPRIDLA IDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDETKLVTGLGGSGLAMPVEVVQ FCWKYNQVRLQDLFNDEGCEAKLRLDEGGKPYVTDNSNYIVDLYFKTPIKDALAAGKEIS ALEGVVEHGLFLDMATSVIIAGTDGVSVKTK

Transcript Sequence

Transcript ID	Os07t0176900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:4068003:4070078:-1 gene:Os07g0176900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribose-5-phosphate isomerase precursor (EC 5.3.1.6). (Os07t0176900-01);Similar to ribose-5-phosphate isomerase. (Os07t0176900-02)
Sequence	ACACGCCTCATCGACCTCCCAAGAACCACCACCGCCTTCTCCCATGGCCGCCGCCACCGT CTCCGTCCGCTTCCACCCGGCCGCATCCGCCGCGCGCTGCGGCGGCGGCGGCGCTGACGC AGGACGACCTGAAGAGGCTGGCGGCGGTGCGCGCGGTGGAGCAGGTGGAGAGCGGGATGG TGCTGGGGCTGGGGACCGGGTCGACGGCGGCCTTCGCCGTCGCGGAGATCGGGGCGCTGC TGGCGTCCGGGAAGCTGAGCGGCATCGTCGGGGTGCCCACCTCCAAGCGCACGTTCGAGC AGGCGCAGTCGCTCGGCATCCCGCTCTCCACCCTCGACGACCACCCCCGCATCGACCTCG CCATCGACGGCGCCGACGAGGTCGATCCAGACCTTAACCTTGTGAAAGGGAGAGGTGGTG CCCTTCTCCGGGAGAAGATGGTTGAGGCAGCATCAGACAAGTTCATCGTTGTTGTTGACG AGACAAAGCTAGTTACCGGCTTAGGAGGGAGTGGTCTAGCCATGCCTGTGGAGGTTGTGC AGTTCTGCTGGAAGTACAACCAAGTGAGATTGCAGGATCTGTTTAACGATGAAGGATGCG AGGCGAAGCTGAGATTGGATGAAGGCGGCAAACCCTACGTTACCGACAACTCAAACTACA TCGTTGATTTATACTTCAAGACGCCGATCAAGGATGCGTTGGCAGCAGGGAAGGAGATCT CAGCTTTGGAAGGCGTCGTTGAGCATGGGCTGTTCCTGGACATGGCGACTTCGGTGATCA TCGCTGGAACAGATGGCGTCAGTGTCAAAACAAAGTGAGTTTTGGGGTTTTGTTGTTGCC GGTGTTGAATTTACGATTTTTTGTTGGGATGTATAAGCTATTGGGGTGTAAAAGCAGGCA ATAAGATGCTTCACTAATAATAATTGAATATATTTCCCCACTCTTTCATTGCTG