Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0176600-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:4049784:4054523:1 gene:Os07g0176600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NIMA-related kinase 3 description:Serine/threonine protein kinase, Never-in-mitosis A (NIMA)-related kinase, Pollen germination (Os07t0176600-01)
Sequence	ATGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTG GTGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAG ACCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAAC CCTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTG ATTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTAT TTCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTG CATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAGGAT CAAAACATACGGCTCGGTGATTTTGGTTTGGCCAAAGTATTGACTTCTGACGATTTAACT TCATCAGTTGTGGGTACTCCCAGCTACATGTGCCCTGAACTTCTTGCTGACATTCCATAT GGTTCCAAGTCTGACATATGGTCACTAGGCTGTTGCCTCTATGAGATGACTGCTTTGAAG CCTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTC GCTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATGCTGCGA AAAAGTCCAGATCACAGACCAAGTGCTGCAGAATTGCTTAAGCACCCACACCTTCAGCCC TTTGTACTGGAACTCCAATTGAAGTCGAGTCCCGCTCGCAATCTTTTCCCGGATACAAAT AAGGCTTCATGTTCTGATGATGAAAACAATTGGAAGGCTAAGTACAGCAAGAGCCATTCA TTTAAAGTAGACAGGATTGTAAAAGTTGACAAAGTTGCTGCTAACAATGGCCATCCTAGT TCTACTGGAACTGCAAAAGATTACCAAGAATTGCTAAAACAACCAATGGATGAGTTGTTA GGACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACA AAATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCT TCAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGA GCAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAA CGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCT CGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCC ACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAG TGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGAT CCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAG CAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTG GAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAG CCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGGCCATATGGTTGTCAAAGAGCTTC AAAGGGACTGGATTGTGA

Peptide Sequence

PEP ID	Os07t0176600-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:4049784:4054523:1 gene:Os07g0176600 transcript:Os07t0176600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NIMA-related kinase 3 description:Serine/threonine protein kinase, Never-in-mitosis A (NIMA)-related kinase, Pollen germination (Os07t0176600-01)
Sequence	MEQYEVLEQIGKGSFGSALLVRHKVEKKRYVLKKIRLARQTDRCRRSAHQEMELIAKVRN PYIVEYKDSWVEKGCYVCIVIGYCEGGDMSEAIKKANSNYFSEERLCMWLVQLLMALDYL HVNHILHRDVKCSNIFLTKDQNIRLGDFGLAKVLTSDDLTSSVVGTPSYMCPELLADIPY GSKSDIWSLGCCLYEMTALKPAFKAFDMQTLINKISKSVLAPLPTIYSGAFRGLIKSMLR KSPDHRPSAAELLKHPHLQPFVLELQLKSSPARNLFPDTNKASCSDDENNWKAKYSKSHS FKVDRIVKVDKVAANNGHPSSTGTAKDYQELLKQPMDELLGQLTEKVVDEVIHGNHSRVT KSPAPTPRRASSTPRIRLEPSKTFHARAAETPPSKCSLERASQPTRRASTPVNMLQTPEK RQGADILTRLKSPDVSVNSPRIDRIAEFPIPSFDDEQLHPTTKLKLYPPSITDQSITKDK CTFQVLRSDSSKNHTGDSSDPSILGTDSNPLITSSSDWMKQRRFDTTSYRQRAEALEGLL EFSAQLLQQERFEELGILLKPFGPGKASPRETAIWLSKSFKGTGL

Transcript Sequence

Transcript ID	Os07t0176600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:4049784:4054523:1 gene:Os07g0176600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NIMA-related kinase 3 description:Serine/threonine protein kinase, Never-in-mitosis A (NIMA)-related kinase, Pollen germination (Os07t0176600-01)
Sequence	AGCCCTCCATTAGCAAGAGTGCCCAATCTATCTGTCTTCTCCATAAGAGAGCATCTCAGG TGTAGTTTTTAGTTTCTCTCTCTAAAAATGGGAGGCAACTGAGGAAGAAGGAAGAACACG GCCTTCATTTCATCCAATTGAGTCAAGAGAGGAAATCTGAATTTGGGGGCGGCCAAGAAA TGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTGG TGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAGA CCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAACC CTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTGA TTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTATT TCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTGC ATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAGGATC AAAACATACGGCTCGGTGATTTTGGTTTGGCCAAAGTATTGACTTCTGACGATTTAACTT CATCAGTTGTGGGTACTCCCAGCTACATGTGCCCTGAACTTCTTGCTGACATTCCATATG GTTCCAAGTCTGACATATGGTCACTAGGCTGTTGCCTCTATGAGATGACTGCTTTGAAGC CTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTCG CTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATGCTGCGAA AAAGTCCAGATCACAGACCAAGTGCTGCAGAATTGCTTAAGCACCCACACCTTCAGCCCT TTGTACTGGAACTCCAATTGAAGTCGAGTCCCGCTCGCAATCTTTTCCCGGATACAAATA AGGCTTCATGTTCTGATGATGAAAACAATTGGAAGGCTAAGTACAGCAAGAGCCATTCAT TTAAAGTAGACAGGATTGTAAAAGTTGACAAAGTTGCTGCTAACAATGGCCATCCTAGTT CTACTGGAACTGCAAAAGATTACCAAGAATTGCTAAAACAACCAATGGATGAGTTGTTAG GACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACAA AATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCTT CAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGAG CAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAAC GGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTC GAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCA CAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGT GCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATC CCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGC AGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGG AGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGC CATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGGCCATATGGTTGTCAAAGAGCTTCA AAGGGACTGGATTGTGATTAATCAGAGTCCTGCAAATGCAAAAAAAAGAAAAAAAAATCT GAACCTAGAATAATTTTGTGTCTTTGATTAGATTCAGGCTGCTCTGTACAGTTTCAGTTT TGTGGTAATATCCTCTTTTCGTCTTTGATTTTCGCGAAATGTTTGAAACACTCCGTTGTT TGGCGAGAGAAGCTCCATTTTTGTGTATAGCAAATAATTGCTCAAGAATGGGGAAGCACC GGTGGTGTGGTGGTGAAATCAGGAATGAATTTACTCCGTATTCTGAGGG