Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0176200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:4020306:4027399:1 gene:Os07g0176200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tesmin/TSO1-like, CXC domain containing protein. (Os07t0176200-01);Similar to Transcription factor CPP. (Os07t0176200-02)
Sequence	ATGGATACTCCTGACCGTGCTGCGGCGGCGGCGCGGGCGGAGGACTCCCCACTTTTCAGC TTCATCGATAGCCTGTCTCCGATCGAGCCTCTCAAGTCCGCGTATTCAGCAAGCAGCATT CAGGCATACCAGTCCCTCAACATCACCTCCATTTCTTCCATCTTCACTTCTCCGCACGAC AATGCGCAAAAGGAATCGAAGCTATCAAAGAGCTCTTTCGCTGAATTCTCTGAAAGTGAG GTTTGTGCCGATGAAAGCGATAAAAACAAGCCATCTAAATCTTCTAATGCTGTCAGGTTG TTTGCCTGCACTAGCACTCTTACACAAGCAACCCACAAAATTACCTCTTCAGTAAGTGAA GGTACAGTAGGACCTCCTGAAGGGTCAAACGATTTGCCTCAACCTGGTCAATTCGATTCT GGCAGTCCAGATCACAACACAACACCTTGCCATGGTGTTAGATCAGATCTTAAACAGGGC AAATGTCGAAAATTACAAGCATTCCAAACAGCTAAGACCAATACTTCGGAGAAAAGGAAA TGCTTGTTTTCTACTGAAGTCCAGCTCATGGATGGGTGCCAGCCAGAAAAACTTAATGAT GAAATCCTGGGATGTGACTGGGATGACTTGATCTCTGCAACTTCGGGTGAACTTATAGCC TATGACGAGGATCACAAAGGAGTGCAGCTAGCAGTAAGTAATGCAGAATCTTGTGGATTT CTGCTATCAAAGCTTACAGGAGATGGTGACATCTCAGACAGAACACATCCTAGTTCATCT ACGCAGACGTACTACCGTGAGTTGCTAATGGACGAAGATCAGACAGAAAATGCTCAGCTA GTTCCAGATGGTGAAAAAAACATCTCAACTGAAGAAATTCAGGATAACCTTTACGAAGCA AATGGAAGTATTCCAACAGGCTACAAGGTTGAGACTCAACAGCAACGTGGCATGCGAAGA CGCTGTCTTGTTTTTGAGGCAGCTGGGTACTCAAATAGGATTGTGCAGAAAGAATCAGTC ATGGATCTGTCAGTCTCAACCTGCAAAGGGAAAAGCCCTGTACAGAATCACTCAAATCCA GGGAAAACTCCATCTCCACGTGTGTTGCGTGGTATAGGTCTACATTTGAATGCTCTTGCT TTAACATCGAAGGATAAAATGATCTGTCAGGATCCCATGTCATCTTTGGTTCCATCATCT GCAACTCAGCAGGAAGCGCATGGGAAGATGTTGTCTGCTGGAGAGAATTTCATTCACCCG GGTGGTGAACTTCTAGAACTTCAGATGGATGATGATTGTTCAGCTGGAGTTTTTCTTGGA AATGATCACGATTCAAGTCAAAGCAACAGCCCTCAAAAGAAGAGGCGCAAATCAGATAAT GGAGATGATGGTGAGGCATGCAAGCGCTGCAGCTGTAAGAAGTCAAAGTGCTTGAAACTT TACTGCGAGTGTTTTGCTGCTGGTGTGTACTGTTCTGAACCTTGCTCATGTCAAGGGTGT CTTAACAAGCCCATACATGAGGAGATTGTTCTTTCCACTCGCAAGCAGATAGAATTCAGG AACCCACTGGCATTTGCTCCAAAAGTGATCCGCATGTCTGATGCTGGTCAGGATATTACT GGGGAAGATCCTAACAACACTCCAGCTTCAGCTCGACATAAGAGAGGATGCAATTGCAAG AAGTCAAGCTGTCTTAAGAAATACTGTGAATGCTATCAGGGAGGCGTTGGATGCTCCAGC AACTGCAGATGTGAGGGTTGCAAAAACACATTTGGCAAAAGAGATGCTGCTGTATCAACT GAGGCTGAAGAAATGAAGCAAGGAGGTGAAGAAGCAGAAAATTGTGGAAAGGAAAAGGAA AACGATCTACAAAAGGCAAATGCACAGAGTGAAGATCACCCATTCCTTGAACTTGTCCCG ATAACTCCACCTTTCGATGTTTCAAGTTCGTTGCTCAAACCACCAAACTTCTCGAGTGCA AAGCCACCAAGGCCTACTAAAGCTCGCTCGAACTCATCTCGTTCATCTTCGAAAGCTCCT GGAGCTGTTCACTCACAGAAGTTCTCCAAGATTGCTAATAGTGGCTTGAATGAAGAAATG CCAGATATATTAAGAGATGATGCTTCTCCTGGTAACTGTGTCAAGACATCTTCACCAAAT GGAAAGAGAGTCTCGCCACCTCATAATGCACTCAGTGTTTCACCAAGCCGAAAAGGTGGC CGGAAGCTGATACTGAAATCCATCCCCTCATTTCCATCACTCATTGGAGACGCAAGCAGC GGTTCATCAATGAACAGTTCCGAGAGCGCATTCAACACTGCATCGCCTCTTGCTTTAGGT CCATCCTAA

Peptide Sequence

PEP ID	Os07t0176200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:4020306:4027399:1 gene:Os07g0176200 transcript:Os07t0176200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tesmin/TSO1-like, CXC domain containing protein. (Os07t0176200-01);Similar to Transcription factor CPP. (Os07t0176200-02)
Sequence	MDTPDRAAAAARAEDSPLFSFIDSLSPIEPLKSAYSASSIQAYQSLNITSISSIFTSPHD NAQKESKLSKSSFAEFSESEVCADESDKNKPSKSSNAVRLFACTSTLTQATHKITSSVSE GTVGPPEGSNDLPQPGQFDSGSPDHNTTPCHGVRSDLKQGKCRKLQAFQTAKTNTSEKRK CLFSTEVQLMDGCQPEKLNDEILGCDWDDLISATSGELIAYDEDHKGVQLAVSNAESCGF LLSKLTGDGDISDRTHPSSSTQTYYRELLMDEDQTENAQLVPDGEKNISTEEIQDNLYEA NGSIPTGYKVETQQQRGMRRRCLVFEAAGYSNRIVQKESVMDLSVSTCKGKSPVQNHSNP GKTPSPRVLRGIGLHLNALALTSKDKMICQDPMSSLVPSSATQQEAHGKMLSAGENFIHP GGELLELQMDDDCSAGVFLGNDHDSSQSNSPQKKRRKSDNGDDGEACKRCSCKKSKCLKL YCECFAAGVYCSEPCSCQGCLNKPIHEEIVLSTRKQIEFRNPLAFAPKVIRMSDAGQDIT GEDPNNTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSSNCRCEGCKNTFGKRDAAVST EAEEMKQGGEEAENCGKEKENDLQKANAQSEDHPFLELVPITPPFDVSSSLLKPPNFSSA KPPRPTKARSNSSRSSSKAPGAVHSQKFSKIANSGLNEEMPDILRDDASPGNCVKTSSPN GKRVSPPHNALSVSPSRKGGRKLILKSIPSFPSLIGDASSGSSMNSSESAFNTASPLALG PS

Transcript Sequence

Transcript ID	Os07t0176200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:4020306:4027399:1 gene:Os07g0176200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tesmin/TSO1-like, CXC domain containing protein. (Os07t0176200-01);Similar to Transcription factor CPP. (Os07t0176200-02)
Sequence	CTGCCCAACCGCGTCTTGAAAATTGTTGCTGCCCTCCTCCGTTCGTCAACCCGGGAGCGA GGAGCGGGAGAGGAGCGGGGTGTACAAAAGCGAGCCCCGGTGGTGGTGAGAGCGAGAGGA GAGGAGGCCAATCGTCGAGGAGGAGGAGGAGGAGGAGGAGATGGATACTCCTGACCGTGC TGCGGCGGCGGCGCGGGCGGAGGACTCCCCACTTTTCAGCTTCATCGATAGCCTGTCTCC GATCGAGCCTCTCAAGTCCGCGTATTCAGCAAGCAGCATTCAGGCATACCAGTCCCTCAA CATCACCTCCATTTCTTCCATCTTCACTTCTCCGCACGACAATGCGCAAAAGGAATCGAA GCTATCAAAGAGCTCTTTCGCTGAATTCTCTGAAAGTGAGGTTTGTGCCGATGAAAGCGA TAAAAACAAGCCATCTAAATCTTCTAATGCTGTCAGGTTGTTTGCCTGCACTAGCACTCT TACACAAGCAACCCACAAAATTACCTCTTCAGTAAGTGAAGGTACAGTAGGACCTCCTGA AGGGTCAAACGATTTGCCTCAACCTGGTCAATTCGATTCTGGCAGTCCAGATCACAACAC AACACCTTGCCATGGTGTTAGATCAGATCTTAAACAGGGCAAATGTCGAAAATTACAAGC ATTCCAAACAGCTAAGACCAATACTTCGGAGAAAAGGAAATGCTTGTTTTCTACTGAAGT CCAGCTCATGGATGGGTGCCAGCCAGAAAAACTTAATGATGAAATCCTGGGATGTGACTG GGATGACTTGATCTCTGCAACTTCGGGTGAACTTATAGCCTATGACGAGGATCACAAAGG AGTGCAGCTAGCAGTAAGTAATGCAGAATCTTGTGGATTTCTGCTATCAAAGCTTACAGG AGATGGTGACATCTCAGACAGAACACATCCTAGTTCATCTACGCAGACGTACTACCGTGA GTTGCTAATGGACGAAGATCAGACAGAAAATGCTCAGCTAGTTCCAGATGGTGAAAAAAA CATCTCAACTGAAGAAATTCAGGATAACCTTTACGAAGCAAATGGAAGTATTCCAACAGG CTACAAGGTTGAGACTCAACAGCAACGTGGCATGCGAAGACGCTGTCTTGTTTTTGAGGC AGCTGGGTACTCAAATAGGATTGTGCAGAAAGAATCAGTCATGGATCTGTCAGTCTCAAC CTGCAAAGGGAAAAGCCCTGTACAGAATCACTCAAATCCAGGGAAAACTCCATCTCCACG TGTGTTGCGTGGTATAGGTCTACATTTGAATGCTCTTGCTTTAACATCGAAGGATAAAAT GATCTGTCAGGATCCCATGTCATCTTTGGTTCCATCATCTGCAACTCAGCAGGAAGCGCA TGGGAAGATGTTGTCTGCTGGAGAGAATTTCATTCACCCGGGTGGTGAACTTCTAGAACT TCAGATGGATGATGATTGTTCAGCTGGAGTTTTTCTTGGAAATGATCACGATTCAAGTCA AAGCAACAGCCCTCAAAAGAAGAGGCGCAAATCAGATAATGGAGATGATGGTGAGGCATG CAAGCGCTGCAGCTGTAAGAAGTCAAAGTGCTTGAAACTTTACTGCGAGTGTTTTGCTGC TGGTGTGTACTGTTCTGAACCTTGCTCATGTCAAGGGTGTCTTAACAAGCCCATACATGA GGAGATTGTTCTTTCCACTCGCAAGCAGATAGAATTCAGGAACCCACTGGCATTTGCTCC AAAAGTGATCCGCATGTCTGATGCTGGTCAGGATATTACTGGGGAAGATCCTAACAACAC TCCAGCTTCAGCTCGACATAAGAGAGGATGCAATTGCAAGAAGTCAAGCTGTCTTAAGAA ATACTGTGAATGCTATCAGGGAGGCGTTGGATGCTCCAGCAACTGCAGATGTGAGGGTTG CAAAAACACATTTGGCAAAAGAGATGCTGCTGTATCAACTGAGGCTGAAGAAATGAAGCA AGGAGGTGAAGAAGCAGAAAATTGTGGAAAGGAAAAGGAAAACGATCTACAAAAGGCAAA TGCACAGAGTGAAGATCACCCATTCCTTGAACTTGTCCCGATAACTCCACCTTTCGATGT TTCAAGTTCGTTGCTCAAACCACCAAACTTCTCGAGTGCAAAGCCACCAAGGCCTACTAA AGCTCGCTCGAACTCATCTCGTTCATCTTCGAAAGCTCCTGGAGCTGTTCACTCACAGAA GTTCTCCAAGATTGCTAATAGTGGCTTGAATGAAGAAATGCCAGATATATTAAGAGATGA TGCTTCTCCTGGTAACTGTGTCAAGACATCTTCACCAAATGGAAAGAGAGTCTCGCCACC TCATAATGCACTCAGTGTTTCACCAAGCCGAAAAGGTGGCCGGAAGCTGATACTGAAATC CATCCCCTCATTTCCATCACTCATTGGAGACGCAAGCAGCGGTTCATCAATGAACAGTTC CGAGAGCGCATTCAACACTGCATCGCCTCTTGCTTTAGGTCCATCCTAAAAGCTGGCTGC TGATTATGAGCGTCCGGAGTACAACTTGTAGTCCGAGAAAAGTGCCTCACATCTGAAGCA CGGCATCAGGTACTGGATGAGGGTAGTTTAAGTTAGAATATTAAGATCTTGTAGCATGTA TTTGTAACATATGTTAGTGGCAAATAATCTGTATGTAAGATAGTATGTTGTGATGATGAT AATGTTGTCTTGATTGAATTCTATCAACACTGTATAAAATCACCTCTGTGGAGGTTTTTC