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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0173700-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:3883518:3885696:1 gene:Os07g0173700 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein S18. (Os07t0173700-00)
Sequence

ATGGGGGAGGATTTCCAGCACATCCTGCGTCTGCTGAACACCAACGTGGATGGGAAGCAG
AAGATCATGTTCGCGCTCACCTCCATCAAGGGTATCGGCCGCCGCTTCTCCAACATTGCC
TGCAAGAAGGCCGACATCGACATGAACAAGCGGGCTGGTGAACTCACTCCTGAGGAGCTT
GAGCGCCTCATGACTGTGGTGGCAAACCCTCGCCAGTTCAAGGTCCCTGACTGGTTTCTG
AACAGGAAGAAGGACTACAAGGATGGGAGGTTCTCCCAGGTTGTTTCTAACGCCCTGGAC
ATGAAGCTCAGGGATGACCTTGAGAGGCTGAAGAAGATCAGGAACCACCGTGGTCTCCGT
CACTACTGGGGTCTCCGTGTCCGTGGTCAGCACACCAAGACTACTGGCAGGAGGGGAAAG
ACTGTCGGTGTCTCCAAGAAGAGATAA

Peptide Sequence

PEP ID

Os07t0173700-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:3883518:3885696:1 gene:Os07g0173700 transcript:Os07t0173700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein S18. (Os07t0173700-00)
Sequence

MGEDFQHILRLLNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEEL
ERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLR
HYWGLRVRGQHTKTTGRRGKTVGVSKKR

Transcript Sequence

Transcript ID

Os07t0173700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:3883518:3885696:1 gene:Os07g0173700 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein S18. (Os07t0173700-00)
Sequence

ATGGGGGAGGATTTCCAGCACATCCTGCGTCTGCTGAACACCAACGTGGATGGGAAGCAG
AAGATCATGTTCGCGCTCACCTCCATCAAGGGTATCGGCCGCCGCTTCTCCAACATTGCC
TGCAAGAAGGCCGACATCGACATGAACAAGCGGGCTGGTGAACTCACTCCTGAGGAGCTT
GAGCGCCTCATGACTGTGGTGGCAAACCCTCGCCAGTTCAAGGTCCCTGACTGGTTTCTG
AACAGGAAGAAGGACTACAAGGATGGGAGGTTCTCCCAGGTTGTTTCTAACGCCCTGGAC
ATGAAGCTCAGGGATGACCTTGAGAGGCTGAAGAAGATCAGGAACCACCGTGGTCTCCGT
CACTACTGGGGTCTCCGTGTCCGTGGTCAGCACACCAAGACTACTGGCAGGAGGGGAAAG
ACTGTCGGTGTCTCCAAGAAGAGATAAATTCCATGTATCTTGATAGGCAGTTTTGTTGGA
TGATGCTTTTGTCTAAGAAGATAGATCGTGCGTTGCAGGATTCTCAAACTTTTTATATAT
TGTTGACTTGGTTGTTTGGTACCGCAAATTCTGAAGCCTAATTTTTTACTGGATGTGTTT
CTAGTGGAAGTTATGTTTTCATATTTCATTGCTGCTACGGTTGACATTGTGCTATTT