Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0173200-03
CDS Infomation	cds chromosome:IRGSP-1.0:7:3847014:3850319:-1 gene:Os07g0173200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0173200-02);Frigida-like family protein. (Os07t0173200-03)
Sequence	ATGGCCTCGCCGGCGGCGGAGGGGGACGCGGTGAGCGCGGGGTTCGCGGAGCTGGAGCGG CAGCAGCAGCTGCTGGCGAGCTGCACGAGGCTGTACAAGCAGCTGGAGGAGCACTTCGCG TCGCTGGAGCGCGGGCTGGCGGCGAGGTCGGACTCGCTCCGCCACAAGCGCCGCGCGGCG GAGGCGCGGGCCTCGGCCGCCATGGACTCGCTCCGCCGCCGCGAGGCCTCCATCGATGGC TCCGTCTCCCGCGCGCTCGACCACCTCGACGACCTCGCCTCCGCCTCGTCGGTGCCGTCC GACGCCGCCGCGGCGGCGGAGGGGGTGGCCGAGAGCCTGAGGGCGATGTGCGCCAGGATG GACTCCGCGGGGTTCTTCGGGTTCGTGGTCGCGCGGCGGAAGGAGGTGGACGCGCTGCGC GCCGAGATGCCGCCCGCGCTCAAGTGCTGCGTGGATCCAGCCAAATTCGTCATGGACGCG GTCGCCGACGTGTTCCCCGTGGACCGCCGCGAGGCGAAGAACCCCACCGACCTGGCCTGG GCGTGCGTGCTCATCCTGGAGGCGGCGGTGCCGGCGCTGGCCGATCCTGACCCGGAGATT GGGGCGGCAAGGCTACTGGTGCCGCGTGCGGCGCGCGAGCGCGCGCGGGGGATGGCGAGG GAGTGGAAGGAGGCGGCGGAGCGCAAGGGCGGGGTGGAGTGGACCAAGCCGCCCGACGCG CACGCCTTCCTGCAGCACGTGGCGACGTTCGCCGTGGCGGAGAGGGAGGACCGGGGGATT TACCGCAGGATTGTGGTCAGCTTCTCGTGGCGCCGACAAATGCCCCGCCTCGCGCTCACC CTCGGCCTTGAAGAAGACATGGCTGATATTATCGAGGAACTAATTGCTAAGGGGCAGCAG CTTGATGCTGTGAATTTTGCGTACGAGGCTGGTCTTCAGGAGAAGTTCCCCCCAGTTCCT CTCTTGAAGTCCTACCTGGCGGACTCGAAGAAGACTTCATGCACCGTTTCAGATAATTCA AGCACCAGCAGTGGTCAATCTGGGAGCAATGCAAACAAGAAAGAGCAATCCGTGCTGAGG GCTGTTATAAAGTGCATTGAGGATCGCAAACTGGAAGCTGAGTTTCCACTGGAGGACCTT CAGAGGCAGCTTGAAGAACTGGAGAAGGCCAAGACTGAGAAGAAAAAGGCAACTTCAAGT GCGTCCAGCGGCGGTAGCAGTGGCCCTGCCACTAAGCCTCGCACACATCGTACGCCATGG CCTCCCCCTACCCTTACGATAGGCCGGTTGGTCATGGCCTCTACTGCAACCAAAGCCCAC CGGCGATCAGGGAGCCATATGTCTACCCAGCCAAGGAGGTAA

Peptide Sequence

PEP ID	Os07t0173200-03
PEP Infomation	pep chromosome:IRGSP-1.0:7:3847014:3850319:-1 gene:Os07g0173200 transcript:Os07t0173200-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0173200-02);Frigida-like family protein. (Os07t0173200-03)
Sequence	MASPAAEGDAVSAGFAELERQQQLLASCTRLYKQLEEHFASLERGLAARSDSLRHKRRAA EARASAAMDSLRRREASIDGSVSRALDHLDDLASASSVPSDAAAAAEGVAESLRAMCARM DSAGFFGFVVARRKEVDALRAEMPPALKCCVDPAKFVMDAVADVFPVDRREAKNPTDLAW ACVLILEAAVPALADPDPEIGAARLLVPRAARERARGMAREWKEAAERKGGVEWTKPPDA HAFLQHVATFAVAEREDRGIYRRIVVSFSWRRQMPRLALTLGLEEDMADIIEELIAKGQQ LDAVNFAYEAGLQEKFPPVPLLKSYLADSKKTSCTVSDNSSTSSGQSGSNANKKEQSVLR AVIKCIEDRKLEAEFPLEDLQRQLEELEKAKTEKKKATSSASSGGSSGPATKPRTHRTPW PPPTLTIGRLVMASTATKAHRRSGSHMSTQPRR

Transcript Sequence

Transcript ID	Os07t0173200-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:3847014:3850319:-1 gene:Os07g0173200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0173200-02);Frigida-like family protein. (Os07t0173200-03)
Sequence	GGACGCCCACTCGCATCGCCGACGAATTTCTCGCTAGGGGTTTCGAGGCGGGCCACATGG CCTCGCCGGCGGCGGAGGGGGACGCGGTGAGCGCGGGGTTCGCGGAGCTGGAGCGGCAGC AGCAGCTGCTGGCGAGCTGCACGAGGCTGTACAAGCAGCTGGAGGAGCACTTCGCGTCGC TGGAGCGCGGGCTGGCGGCGAGGTCGGACTCGCTCCGCCACAAGCGCCGCGCGGCGGAGG CGCGGGCCTCGGCCGCCATGGACTCGCTCCGCCGCCGCGAGGCCTCCATCGATGGCTCCG TCTCCCGCGCGCTCGACCACCTCGACGACCTCGCCTCCGCCTCGTCGGTGCCGTCCGACG CCGCCGCGGCGGCGGAGGGGGTGGCCGAGAGCCTGAGGGCGATGTGCGCCAGGATGGACT CCGCGGGGTTCTTCGGGTTCGTGGTCGCGCGGCGGAAGGAGGTGGACGCGCTGCGCGCCG AGATGCCGCCCGCGCTCAAGTGCTGCGTGGATCCAGCCAAATTCGTCATGGACGCGGTCG CCGACGTGTTCCCCGTGGACCGCCGCGAGGCGAAGAACCCCACCGACCTGGCCTGGGCGT GCGTGCTCATCCTGGAGGCGGCGGTGCCGGCGCTGGCCGATCCTGACCCGGAGATTGGGG CGGCAAGGCTACTGGTGCCGCGTGCGGCGCGCGAGCGCGCGCGGGGGATGGCGAGGGAGT GGAAGGAGGCGGCGGAGCGCAAGGGCGGGGTGGAGTGGACCAAGCCGCCCGACGCGCACG CCTTCCTGCAGCACGTGGCGACGTTCGCCGTGGCGGAGAGGGAGGACCGGGGGATTTACC GCAGGATTGTGGTCAGCTTCTCGTGGCGCCGACAAATGCCCCGCCTCGCGCTCACCCTCG GCCTTGAAGAAGACATGGCTGATATTATCGAGGAACTAATTGCTAAGGGGCAGCAGCTTG ATGCTGTGAATTTTGCGTACGAGGCTGGTCTTCAGGAGAAGTTCCCCCCAGTTCCTCTCT TGAAGTCCTACCTGGCGGACTCGAAGAAGACTTCATGCACCGTTTCAGATAATTCAAGCA CCAGCAGTGGTCAATCTGGGAGCAATGCAAACAAGAAAGAGCAATCCGTGCTGAGGGCTG TTATAAAGTGCATTGAGGATCGCAAACTGGAAGCTGAGTTTCCACTGGAGGACCTTCAGA GGCAGCTTGAAGAACTGGAGAAGGCCAAGACTGAGAAGAAAAAGGCAACTTCAAGTGCGT CCAGCGGCGGTAGCAGTGGCCCTGCCACTAAGCCTCGCACACATCGTACGCCATGGCCTC CCCCTACCCTTACGATAGGCCGGTTGGTCATGGCCTCTACTGCAACCAAAGCCCACCGGC GATCAGGGAGCCATATGTCTACCCAGCCAAGGAGGTAACTAATTTTGCGCCAGGTTTGCC GTACTCTTCCCCTCCCATAAGCTATCCCCACGCCTATGGCGGGTACAACAATGGAATGGG AGCTTACAACAATGGAATGGCACCTGCCTTCCACCAGGCTTACTACCGGTAGGATCAGTC AGGAAAGTCGCTGATGAATGACATGACAAATAACTGATGATGTCGACGACAACTCAATCT GCACAATGGCTCATATTTTGTAGTGACTGACTACAAACGGTAGGTTGGGTATCTCATCTT ATCTGTGCTTACTAAGTTACCACTACTACTAGATGCACTCTACTCTGCATTGTGTTAGGT TATCTCATGCCTAGATCACTACTTTGTACTACCACTAAGAAACCTGGATGTAAATTATGT ACGCTACCATTGAGACTGTACTGCATTATGTAATTCTGTTCAGAAACAATGAAAAAAACA CCCAAAAAAATAAACTATCATGTAATCCTTCGGCACCTTGATGGACCACTTAATCAAAGA CAATTCTTAGTTTAGC