Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0173100-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:3843577:3844443:1 gene:Os07g0173100 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os07t0173100-00)
Sequence

ATGAGGGTGCACCCGGCGCCGCGGAAGCGCACCATCGCCGTGCAGCGGCGGTGCGGGGTG
GCCGCGGCGGCGGCGGGGATGGCCGGCGGGAAGAAGCTGAGGCGGCTCCCGCACATCTTC
GCCAAGGTGCTCGAGCTCCCGTTCGCCGCGGACGCCGACGTCTCCGTGGAGGAGGACGCC
GCGGCGCTCCGGTTCGTGGCCGCGGCGGACGGGTTCACCCCGTCCGGCGGCGCCAGCGCC
CACGCCGTCGAGATCCACCCGGGGGTCACCAAGGTTGTCGTGCGGGACCTCTCCGCCGGG
CTCGACGGCGACGACGGCGCCGTGTTCGAGCTCGATCGGTGGCGGTTCCGCCTCCCCCCG
TGCACGCTCCCCGCCATGGCCACCGCCACCTACGCCGACGGCGAGCTCGTCGTCACCGTC
CCCAAGGGCGCCGCCCCTGACGACGACGGCGATGGCGCCGCCGCCGCCGTGCTTGGAGGC
TCCGGCGTCGTCGAGAGCGTCCTGCTGCTTGTATAG

Peptide Sequence

PEP ID

Os07t0173100-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:3843577:3844443:1 gene:Os07g0173100 transcript:Os07t0173100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os07t0173100-00)
Sequence

MRVHPAPRKRTIAVQRRCGVAAAAAGMAGGKKLRRLPHIFAKVLELPFAADADVSVEEDA
AALRFVAAADGFTPSGGASAHAVEIHPGVTKVVVRDLSAGLDGDDGAVFELDRWRFRLPP
CTLPAMATATYADGELVVTVPKGAAPDDDGDGAAAAVLGGSGVVESVLLLV

Transcript Sequence

Transcript ID

Os07t0173100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:3843577:3844443:1 gene:Os07g0173100 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os07t0173100-00)
Sequence

GCATCACTACCATCACCACCACCACCGCGCTTGCTCTTCTTCCTCCCCCGTTTTCCCCAA
GGCGCAAACCACCACGAAAGCCCCCGAATCCGCAGCGCGAATTTCAAAGCAGCCTCCCCC
CCAACCTCCGATCTCCCGCTCCCTCGCTCTCTCTCTCTCTCTCTCGCGCGCGCGCGCGCC
ATCTAGGGTTAGGGTTTCGAGAGGATCCCGCTGCTTGCGAGTCCCGACCATGAGGGTGCA
CCCGGCGCCGCGGAAGCGCACCATCGCCGTGCAGCGGCGGTGCGGGGTGGCCGCGGCGGC
GGCGGGGATGGCCGGCGGGAAGAAGCTGAGGCGGCTCCCGCACATCTTCGCCAAGGTGCT
CGAGCTCCCGTTCGCCGCGGACGCCGACGTCTCCGTGGAGGAGGACGCCGCGGCGCTCCG
GTTCGTGGCCGCGGCGGACGGGTTCACCCCGTCCGGCGGCGCCAGCGCCCACGCCGTCGA
GATCCACCCGGGGGTCACCAAGGTTGTCGTGCGGGACCTCTCCGCCGGGCTCGACGGCGA
CGACGGCGCCGTGTTCGAGCTCGATCGGTGGCGGTTCCGCCTCCCCCCGTGCACGCTCCC
CGCCATGGCCACCGCCACCTACGCCGACGGCGAGCTCGTCGTCACCGTCCCCAAGGGCGC
CGCCCCTGACGACGACGGCGATGGCGCCGCCGCCGCCGTGCTTGGAGGCTCCGGCGTCGT
CGAGAGCGTCCTGCTGCTTGTATAGTATACTTGAGCACCAGTAATTTCCACTGTTTTTGC
TCACTCTTGCATGTTTTTAATATTTGTATGGTAATAACATATGGCAGTAAGGGTAACAAA
TAATGTATATGAATCACTATTTGCTCT