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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0172900-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:3830512:3833279:1 gene:Os07g0172900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to biopterin transport-related protein BT1. (Os07t0172900-01);Hypothetical conserved gene. (Os07t0172900-02)
Sequence

ATGAGGAGCTCCCACTGTGAGAGCTACTGCGCTCCTCCCTTGTGCAACCTCCCCTGCCTC
CCCAAATCCAAAGACGATTCGACCACGGACGATGCCGCCGCCGCGTCGTCTCCAACTCCG
GCCACCGTCGTCGCCGCAGCTTTCGCTGAGGACAAGCCTCCTCCGCTGCAGAAGATTGAG
GCGGCGGTGACGGCAAACAAGGATCATGATGATGATGGTGATGGTGGTGGTGATGAGGGT
AGCAAGGAAGTGGTGGTGACAGTGGTTCCCAAGAGTAGCCTGAAGAAGACTAATTGTGAG
GACAGTAAGAATGTGGTGAAGGGCAATGTGAAATGGATGGATTTGCTGGGGAAGGATCTC
ACTCAAGTTAAAGAATTTGAGCCAAGCGAATCTGGAGACTCGGATGACGAAGACGGCAAC
ACCTGCATCTGTGTCATCCAGTAA

Peptide Sequence

PEP ID

Os07t0172900-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:3830512:3833279:1 gene:Os07g0172900 transcript:Os07t0172900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to biopterin transport-related protein BT1. (Os07t0172900-01);Hypothetical conserved gene. (Os07t0172900-02)
Sequence

MRSSHCESYCAPPLCNLPCLPKSKDDSTTDDAAAASSPTPATVVAAAFAEDKPPPLQKIE
AAVTANKDHDDDGDGGGDEGSKEVVVTVVPKSSLKKTNCEDSKNVVKGNVKWMDLLGKDL
TQVKEFEPSESGDSDDEDGNTCICVIQ

Transcript Sequence

Transcript ID

Os07t0172900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:3830512:3833279:1 gene:Os07g0172900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to biopterin transport-related protein BT1. (Os07t0172900-01);Hypothetical conserved gene. (Os07t0172900-02)
Sequence

TTTGGATTCCTCCTCCTCCTGCTGCTGCTCTCTCTCCTCCAAGGCTCCAACACATCCTGG
TCCCGAGAGAAAAAGGGGAGATATTTTTTTGGGGGCGCATGATTCGATCCCTTGTTGTTT
GCTGTTGTTGCCTTGCTGCGCAAAGATTTGGTCCTTTCTCGGTCTGTTTCTTGGCCTGTT
CAGCTCGGTGGTGGTGGTGTTGTTGGTGGTGCAGTTCTTGGAGTCACATGGTTGGTGGTG
GTGTGGGCAGTTCTTGATCCAGGCTCAGATTGAAACTGGCGGTCGAGAGATTCCTGGTTG
CAGGAGAAGTTCTTGGTCGCATTTCGGGTGGTGGTGGTGGTGGTGGTGGTGGCAGTTCTT
GATCTGCTCCCTCGGGAGAATTCGATTGATGTGGTGGGTTCTCTTCTTCTTCTTCTCCTT
GGAGCTCAGTTCCCCAATTCGCCATTTTGATGAGGAGCTCCCACTGTGAGAGCTACTGCG
CTCCTCCCTTGTGCAACCTCCCCTGCCTCCCCAAATCCAAAGACGATTCGACCACGGACG
ATGCCGCCGCCGCGTCGTCTCCAACTCCGGCCACCGTCGTCGCCGCAGCTTTCGCTGAGG
ACAAGCCTCCTCCGCTGCAGAAGATTGAGGCGGCGGTGACGGCAAACAAGGATCATGATG
ATGATGGTGATGGTGGTGGTGATGAGGGTAGCAAGGAAGTGGTGGTGACAGTGGTTCCCA
AGAGTAGCCTGAAGAAGACTAATTGTGAGGACAGTAAGAATGTGGTGAAGGGCAATGTGA
AATGGATGGATTTGCTGGGGAAGGATCTCACTCAAGTTAAAGAATTTGAGCCAAGCGAAT
CTGGAGACTCGGATGACGAAGACGGCAACACCTGCATCTGTGTCATCCAGTAAGCAGCCC
CTTGGAGATCATCCCTGTAAATTCTCTGAAAGGAAAAACCGAAAAACAAGTGTCTGGGTC
AGCCATTAGTTGTTTATTTGTCAGTAGAGAGATCAGAGAGCCCCCCATTGTGTCGTTGGT
TTATCTGGAATTGTGGATGGAATTGGGTTGTGTTGTACTATCAATCAGCAGCAGCTTCAC
CAGTACATGTTGCACATGCATAGAGTTTAGATTTTAGAAGATTCCTGCAAAGATCTG