Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0170300-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:3726683:3731161:-1 gene:Os07g0170300 gene_biotype:protein_coding transcript_biotype:protein_coding description:YT521-B-like protein family protein. (Os07t0170300-01)
Sequence	ATGGAGGCTCCGGCAAATAGCGTGGCAGTGGCTGATGGGAACCCAAAGACAGCGACAGAG ACTCCGCGGGTGGAGGATTACAAGGACGCTGCCATGTACTATGGAACGTACCCGGCTTAT CTCTATGGAGCCTATGGTGGCTGGGGGGAGTACTCCACATACCTGAGCCATGATGGTGCA GAGACACCAACTGCTGGTGCTTATGGGGATATGTACTATGGCTATTCTCCATATGGTTAT TCAACTTCAGGACATGATAGTCAGATGTATGGATCTCAGCATTACCAGTACCAACCGACA TACAACAAACAACAGAATACCACTGGCAAGCCTTCCAACAATGGAAAAACTGAAAATCCG GCTGCACTGCCCCAAGGGGATGTCTCTGCTAATGGTGTTGATAGTCTGAAAGGTCAGAAA AAGACGAATCTGCTCCCGAAGGCAAGCCAGAATACACCAGGTTCCAACGGTTCCTATGGC CGACCTAGTGGGCGTTTTGGTAACTACCAGAACCAAACTAACCGAACAACTTATCCATGC TACAGTAGTCAAATCTTCAATGGCAAGCAGCAAAAACTTCCCACTGGCAATCGTTCTCTG ACAACTTCCAATTCTAAAAGCAAGGGACAGTCAAGGAATCAGAACACATATCCTCATCTC ATGGGTCTGCAGACACCTACTTCTCCGTTGGGACCACCATCAATTTACTCGGCTAGTGGA ATGTATGGATACAATGGGAGTTCATATGGGTCCGGCCTATGGTATGGATCACACCTGTAT GGTTCTGGATTGTACGGGGGATGGAATGCACTGTCGGATGGCAAATACAATCCCAGAGGA AGAGGTAATGGATCCTATGGTTATATCCATGGAAATCAGGATGGGTTTAATGAGCTAAGA AGAGGGCCAAGAAGTGGTCTTTTCAATAACCAACAGGGAGTTGGAGCTACTGTTGCACCT GTGAAGGGACAAGAGCTTTCAGCCAGCGATAGCTCGCTTTCTGTCATGAAGGATCAGTAT AACCGGGCTGATTTTGTGGAAACATACTCAGATGCTAAATTCTTCATCATCAAATCATAC AGTGAGGATGATGTTCACAAGAGCATTAAGTACAATGTTTGGGCTAGCACATCCAATGGT AATAAAAAGCTTGATGCTGCTTATCAGGAGGCTAAGGAAAAATCAAGTGATTCTTCTGTG TTCCTTCTTTTCTCTGTGAATGCAAGTGGTCAGTTTGTTGGTCTTGCTGAGATGGTGGGC CGTGTTGATTTTAACAAGACATTGGAACACTGGCAACAGGACAAGTGGACTGGCTGTTTC CCTGTAAAGTGGCATATTGTGAAGGATGTTCCAAACAGCTTACTGAAACACATCATTCTT GAAAACAATGAGAACAAACCAGTCACAAATTGCAGAGATACTCATGAGGTGAAACTTGAG CCAGGGCTTCAAGTGCTTAAGATTTTCAAGGACCATGTCTGCAAGACGTCGTTACTGGAT GACTTTGATTTCTATGATAATCGTGAGAAGATGATGCAAGAGAGGAAGGCAAAGCATCAA CAACTGAAGAAGGTCGTTGATGAGAAGCTGCTTAATGCTGTGGACACTGAGAACAGCTTG TTAACTGTGAAATCCAAATTGCAGGAAACAGCTGAGGTAGAGATTGATGTCTTAAACAAA GAGCCTCATGGTAAAGCAGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGGCCGTTTCT GTAAATGGTGTTACCCCAGAAGATGTTCAGTTGACAAACGAGAAGTTGGCCAGTTTGAGC GTCTGTTAA

Peptide Sequence

PEP ID	Os07t0170300-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:3726683:3731161:-1 gene:Os07g0170300 transcript:Os07t0170300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:YT521-B-like protein family protein. (Os07t0170300-01)
Sequence	MEAPANSVAVADGNPKTATETPRVEDYKDAAMYYGTYPAYLYGAYGGWGEYSTYLSHDGA ETPTAGAYGDMYYGYSPYGYSTSGHDSQMYGSQHYQYQPTYNKQQNTTGKPSNNGKTENP AALPQGDVSANGVDSLKGQKKTNLLPKASQNTPGSNGSYGRPSGRFGNYQNQTNRTTYPC YSSQIFNGKQQKLPTGNRSLTTSNSKSKGQSRNQNTYPHLMGLQTPTSPLGPPSIYSASG MYGYNGSSYGSGLWYGSHLYGSGLYGGWNALSDGKYNPRGRGNGSYGYIHGNQDGFNELR RGPRSGLFNNQQGVGATVAPVKGQELSASDSSLSVMKDQYNRADFVETYSDAKFFIIKSY SEDDVHKSIKYNVWASTSNGNKKLDAAYQEAKEKSSDSSVFLLFSVNASGQFVGLAEMVG RVDFNKTLEHWQQDKWTGCFPVKWHIVKDVPNSLLKHIILENNENKPVTNCRDTHEVKLE PGLQVLKIFKDHVCKTSLLDDFDFYDNREKMMQERKAKHQQLKKVVDEKLLNAVDTENSL LTVKSKLQETAEVEIDVLNKEPHGKAGQVDGKENGVLAVSVNGVTPEDVQLTNEKLASLS VC

Transcript Sequence

Transcript ID	Os07t0170300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:3726683:3731161:-1 gene:Os07g0170300 gene_biotype:protein_coding transcript_biotype:protein_coding description:YT521-B-like protein family protein. (Os07t0170300-01)
Sequence	CTCGCAGCTCAAAAACCCTAGCCGCCACTCCGCCATTTCGGTAAGGTTTGCTGCGACTCC GCCGCGACGCATCTTGCGCCGCCAGCCGCCGCCGCCGCGCGCCTCCTCCCCCGTCGACCT CGGCTGACGCGCGGCGCCCTCGAGCTCGCGTCGCGTCGCGTCGTGTCCCTCTCGTTGATG GAGGCTCCGGCAAATAGCGTGGCAGTGGCTGATGGGAACCCAAAGACAGCGACAGAGACT CCGCGGGTGGAGGATTACAAGGACGCTGCCATGTACTATGGAACGTACCCGGCTTATCTC TATGGAGCCTATGGTGGCTGGGGGGAGTACTCCACATACCTGAGCCATGATGGTGCAGAG ACACCAACTGCTGGTGCTTATGGGGATATGTACTATGGCTATTCTCCATATGGTTATTCA ACTTCAGGACATGATAGTCAGATGTATGGATCTCAGCATTACCAGTACCAACCGACATAC AACAAACAACAGAATACCACTGGCAAGCCTTCCAACAATGGAAAAACTGAAAATCCGGCT GCACTGCCCCAAGGGGATGTCTCTGCTAATGGTGTTGATAGTCTGAAAGGTCAGAAAAAG ACGAATCTGCTCCCGAAGGCAAGCCAGAATACACCAGGTTCCAACGGTTCCTATGGCCGA CCTAGTGGGCGTTTTGGTAACTACCAGAACCAAACTAACCGAACAACTTATCCATGCTAC AGTAGTCAAATCTTCAATGGCAAGCAGCAAAAACTTCCCACTGGCAATCGTTCTCTGACA ACTTCCAATTCTAAAAGCAAGGGACAGTCAAGGAATCAGAACACATATCCTCATCTCATG GGTCTGCAGACACCTACTTCTCCGTTGGGACCACCATCAATTTACTCGGCTAGTGGAATG TATGGATACAATGGGAGTTCATATGGGTCCGGCCTATGGTATGGATCACACCTGTATGGT TCTGGATTGTACGGGGGATGGAATGCACTGTCGGATGGCAAATACAATCCCAGAGGAAGA GGTAATGGATCCTATGGTTATATCCATGGAAATCAGGATGGGTTTAATGAGCTAAGAAGA GGGCCAAGAAGTGGTCTTTTCAATAACCAACAGGGAGTTGGAGCTACTGTTGCACCTGTG AAGGGACAAGAGCTTTCAGCCAGCGATAGCTCGCTTTCTGTCATGAAGGATCAGTATAAC CGGGCTGATTTTGTGGAAACATACTCAGATGCTAAATTCTTCATCATCAAATCATACAGT GAGGATGATGTTCACAAGAGCATTAAGTACAATGTTTGGGCTAGCACATCCAATGGTAAT AAAAAGCTTGATGCTGCTTATCAGGAGGCTAAGGAAAAATCAAGTGATTCTTCTGTGTTC CTTCTTTTCTCTGTGAATGCAAGTGGTCAGTTTGTTGGTCTTGCTGAGATGGTGGGCCGT GTTGATTTTAACAAGACATTGGAACACTGGCAACAGGACAAGTGGACTGGCTGTTTCCCT GTAAAGTGGCATATTGTGAAGGATGTTCCAAACAGCTTACTGAAACACATCATTCTTGAA AACAATGAGAACAAACCAGTCACAAATTGCAGAGATACTCATGAGGTGAAACTTGAGCCA GGGCTTCAAGTGCTTAAGATTTTCAAGGACCATGTCTGCAAGACGTCGTTACTGGATGAC TTTGATTTCTATGATAATCGTGAGAAGATGATGCAAGAGAGGAAGGCAAAGCATCAACAA CTGAAGAAGGTCGTTGATGAGAAGCTGCTTAATGCTGTGGACACTGAGAACAGCTTGTTA ACTGTGAAATCCAAATTGCAGGAAACAGCTGAGGTAGAGATTGATGTCTTAAACAAAGAG CCTCATGGTAAAGCAGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGGCCGTTTCTGTA AATGGTGTTACCCCAGAAGATGTTCAGTTGACAAACGAGAAGTTGGCCAGTTTGAGCGTC TGTTAAGTTTTTTCTCATCATTTCAGCCATTGAGGGGTGGTGTAAGGTGAAGGGCTATAT AGGTTGGGAAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGTGAGTTTC TCCGTTGCTTTTGGTTAGGACTTGGAGGTGGTTTCATAGGAGAGCTAGAAGTTTAGCTGA TTGTGTCTGGTGAGATGTGCGGATAGCAGTAGAGGTTTTTTGGACTTTTGGTTTTCAATG ATGGATCATTGGTTTGCGCAGTTCCTTTTCTTTTATATTCTGTTCTCTTTTGCGTTGGGC AGGTGTAGCTTTTTTTAGTATGTTTGGTGTCTGAACCTGAAAGCATGTCAAGAGTGTTTA AACCTGGGAATTCAATTAAGAAATTTACTCTTTTGTTCCAATGCTTATTTTCTGATATTG CTTTG