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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0170200-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:3725057:3726449:1 gene:Os07g0170200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0170200-00)
Sequence

GTGAACGTTGTCTGCTGGAAGCGTGCAATTTGCTTGGAATTCATGGCGAAGGCCGATGTA
TTGGAGTACTATGACCAGACTGTCTCCTCACCCAGTGGATCATTCTACATCCCTGCAGTT
CTCAGGGTTCCAGAGCTGCTGCAGGTTGTAAAGCGAAGAAGAGTTAAGCACAGCCTTAGC
CGTAAAAACATTCTTTACAGGGATGGATTTACTTGCCAGTATTGTTCTTCTGTTGATAAC
CTAACGATTGATCATGTCATTCCGACTGCACGTGGCGGAAAATGGGAATGGGAAAATCTG
GTGACTGCATGCTCAAGATGCAACTCCAGGAAGGGCCAGAAGACAGTGGAGCAAGCAAAC
ATGAAGCTACTCAAGGTCCCCAAGGCGCCAAAGGAATTTGACATTCTTGCAGTACCCTTG
ACAAAAGCTGCATTCAGGACGCTCAAGAGGAGCCAAGGGTTGCCTGAAGAATGGCTGCAA
TACTTGGCCAGGCCATCTCCATGA

Peptide Sequence

PEP ID

Os07t0170200-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:3725057:3726449:1 gene:Os07g0170200 transcript:Os07t0170200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0170200-00)
Sequence

VNVVCWKRAICLEFMAKADVLEYYDQTVSSPSGSFYIPAVLRVPELLQVVKRRRVKHSLS
RKNILYRDGFTCQYCSSVDNLTIDHVIPTARGGKWEWENLVTACSRCNSRKGQKTVEQAN
MKLLKVPKAPKEFDILAVPLTKAAFRTLKRSQGLPEEWLQYLARPSP

Transcript Sequence

Transcript ID

Os07t0170200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:3725057:3726449:1 gene:Os07g0170200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0170200-00)
Sequence

GTGAACGTTGTCTGCTGGAAGCGTGCAATTTGCTTGGAATTCATGGCGAAGGCCGATGTA
TTGGAGTACTATGACCAGACTGTCTCCTCACCCAGTGGATCATTCTACATCCCTGCAGTT
CTCAGGGTTCCAGAGCTGCTGCAGGTTGTAAAGCGAAGAAGAGTTAAGCACAGCCTTAGC
CGTAAAAACATTCTTTACAGGGATGGATTTACTTGCCAGTATTGTTCTTCTGTTGATAAC
CTAACGATTGATCATGTCATTCCGACTGCACGTGGCGGAAAATGGGAATGGGAAAATCTG
GTGACTGCATGCTCAAGATGCAACTCCAGGAAGGGCCAGAAGACAGTGGAGCAAGCAAAC
ATGAAGCTACTCAAGGTCCCCAAGGCGCCAAAGGAATTTGACATTCTTGCAGTACCCTTG
ACAAAAGCTGCATTCAGGACGCTCAAGAGGAGCCAAGGGTTGCCTGAAGAATGGCTGCAA
TACTTGGCCAGGCCATCTCCATGAACACCAGCTCCAGAAATTAGTGGCCATCTGTCAATG
TATATATATTAACTAGGCTATTCTTCAGCCCAAGATTCACCTGTGCGCATCAGAAACTCT
GTACATGCCTGACTCAGTAAAATAAAACAAGATTCTGACTATAGTACAAATGGTTGGACA