Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0170100-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:3718724:3722592:-1 gene:Os07g0170100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Branched chain alpha-keto acid dehydrogenase E1 beta subunit. (Os07t0170100-01);Similar to Branched chain alpha-keto acid dehydrogenase E1 beta subunit. (Os07t0170100-02)
Sequence

ATGGCGGCGAAGTCTTTGAGGGAGATCAGGAGAGCGGCGGCGGCGGGGATTGGGAGTAGG
AGATGCTTCTCCGGCGACGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGTGGCGGAGGGG
AAGGTGGGAGGAGGAGCGGGGAAGGAGGTGAACCTGTTCACGGCCATCAACCAGGCGCTC
CACATCGCCCTCGACACCGACCCGCGCTCTTATGTCTTCGGGGAAGATGTGGGTTTCGGT
GGTGTCTTCCGCTGCACAACAGGGCTCGCTGATCGGTTTGGCAGGAATAGAGTTTTCAAT
ACGCCGTTGTGTGAACAGGGAATTGCTGGATTTGCCGTTGGTCTAGCAGCAATGGGTAAT
AGAGCTATTGCTGAGATCCAGTTCGCAGATTATATCTTTCCAGCTTTTGATCAGATTGTT
AATGAAGCAGCTAAATTTAGATACCGGAGTGGAAATGAATTTAACTGTGGAGGATTAACG
ATTCGATCACCTTATGGCGCTGTCGGTCATGGTGGTCACTACCATTCACAGTCACCAGAG
GCTTTCTTTTGTCATGTTCCTGGACTCAAGGTAATCATACCTCGAAGTCCACGTGAAGCC
AAGGGATTGTTGTTGGCAAGCATTAGAGACCCAAATCCAGTCGTATTTTTTGAGCCAAAG
TGGTTGTACCGTTTGGCTGTTGAAGAAGTTCCAGAGGAGGATTATATGCTGCCCTTGTCT
GAGGCAGAGGTGATTCGTAAAGGAAGTGATATAACACTAATTGGTTGGGGAGCTCAACTT
GCAGTACTGGAAGAAGCATGCGAAGATGCAGCAAAGGATGGAATATCTTGTGAGCTCATA
GATCTAAGAACACTGATTCCATGGGACAAAGAAACAGTAGAGGCCTCTGTCAGCAAGACA
GGAAAACTTCTTGTTAGCCATGAGGCTCCAATCACCGGAGGGTTTGGTGCAGAAATTGCC
GCATCCATCACCGAGCGCTGCTTCCAAAGGTTAGAAGCGCCCGTCGCAAGAGTATGCGGC
CTGGACACTCCTTTCCCTCTTGTTTATGAAACATTTTACATGCCCACAAAGAACAAGGTC
CTGGACGCTATCAAAGCAACTGTAAATTACTGA

Peptide Sequence

PEP ID

Os07t0170100-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:3718724:3722592:-1 gene:Os07g0170100 transcript:Os07t0170100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Branched chain alpha-keto acid dehydrogenase E1 beta subunit. (Os07t0170100-01);Similar to Branched chain alpha-keto acid dehydrogenase E1 beta subunit. (Os07t0170100-02)
Sequence

MAAKSLREIRRAAAAGIGSRRCFSGDAAAAAAAAAGVAEGKVGGGAGKEVNLFTAINQAL
HIALDTDPRSYVFGEDVGFGGVFRCTTGLADRFGRNRVFNTPLCEQGIAGFAVGLAAMGN
RAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNEFNCGGLTIRSPYGAVGHGGHYHSQSPE
AFFCHVPGLKVIIPRSPREAKGLLLASIRDPNPVVFFEPKWLYRLAVEEVPEEDYMLPLS
EAEVIRKGSDITLIGWGAQLAVLEEACEDAAKDGISCELIDLRTLIPWDKETVEASVSKT
GKLLVSHEAPITGGFGAEIAASITERCFQRLEAPVARVCGLDTPFPLVYETFYMPTKNKV
LDAIKATVNY

Transcript Sequence

Transcript ID

Os07t0170100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:3718724:3722592:-1 gene:Os07g0170100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Branched chain alpha-keto acid dehydrogenase E1 beta subunit. (Os07t0170100-01);Similar to Branched chain alpha-keto acid dehydrogenase E1 beta subunit. (Os07t0170100-02)
Sequence

ACCTACTTCGAGCTGAGCCTGATCGATTCGCGAGATTTCCGTTCATGGCGGCGAAGTCTT
TGAGGGAGATCAGGAGAGCGGCGGCGGCGGGGATTGGGAGTAGGAGATGCTTCTCCGGCG
ACGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGTGGCGGAGGGGAAGGTGGGAGGAGGAG
CGGGGAAGGAGGTGAACCTGTTCACGGCCATCAACCAGGCGCTCCACATCGCCCTCGACA
CCGACCCGCGCTCTTATGTCTTCGGGGAAGATGTGGGTTTCGGTGGTGTCTTCCGCTGCA
CAACAGGGCTCGCTGATCGGTTTGGCAGGAATAGAGTTTTCAATACGCCGTTGTGTGAAC
AGGGAATTGCTGGATTTGCCGTTGGTCTAGCAGCAATGGGTAATAGAGCTATTGCTGAGA
TCCAGTTCGCAGATTATATCTTTCCAGCTTTTGATCAGATTGTTAATGAAGCAGCTAAAT
TTAGATACCGGAGTGGAAATGAATTTAACTGTGGAGGATTAACGATTCGATCACCTTATG
GCGCTGTCGGTCATGGTGGTCACTACCATTCACAGTCACCAGAGGCTTTCTTTTGTCATG
TTCCTGGACTCAAGGTAATCATACCTCGAAGTCCACGTGAAGCCAAGGGATTGTTGTTGG
CAAGCATTAGAGACCCAAATCCAGTCGTATTTTTTGAGCCAAAGTGGTTGTACCGTTTGG
CTGTTGAAGAAGTTCCAGAGGAGGATTATATGCTGCCCTTGTCTGAGGCAGAGGTGATTC
GTAAAGGAAGTGATATAACACTAATTGGTTGGGGAGCTCAACTTGCAGTACTGGAAGAAG
CATGCGAAGATGCAGCAAAGGATGGAATATCTTGTGAGCTCATAGATCTAAGAACACTGA
TTCCATGGGACAAAGAAACAGTAGAGGCCTCTGTCAGCAAGACAGGAAAACTTCTTGTTA
GCCATGAGGCTCCAATCACCGGAGGGTTTGGTGCAGAAATTGCCGCATCCATCACCGAGC
GCTGCTTCCAAAGGTTAGAAGCGCCCGTCGCAAGAGTATGCGGCCTGGACACTCCTTTCC
CTCTTGTTTATGAAACATTTTACATGCCCACAAAGAACAAGGTCCTGGACGCTATCAAAG
CAACTGTAAATTACTGAGGTGCTGGAGCAAGCTACCTATGCGTTGTTCCTTGACAGTATA
GACAAAAATTATGTGCACCTTATTGCTGGTTGTAGCCTGAATATGCATCTCCATAAAAGC
ATTGTATTTGATAATATAGAATTATAGATCAATAAAGCCGTGAAGATGC