Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0168300-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:3662374:3663407:1 gene:Os07g0168300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TAU GLUTATHIONE S-TRANSFERASE 11 description:Similar to Glutathione S-transferase GSTU6. (Os07t0168300-01)
Sequence

ATGGCGGCCGGAGCCGGAGGAGACGGCGGCGGCGAGCTGAAGCTTCTGGGGACGTGGGCG
AGCCCGTTCGTGCAGCGGGTGCGCCTCGCGCTGAACCTCAAGGGCCTCGCGTACGAGTTC
ATCGAGGAGGAGATCGGCGGCGGCAAGAGCGAGCTCCTCCTCGCCTCCAACCCCGTCCAC
AAGAAGGTCCCCGTCCTCCTCCACCGCAGCAACCCCATCTGCGAGTCCCAGGTCATCGTC
CAGTACCTCGACGACGCCTTCCCCGGCGGCGCCGCCGGCGGCGACCTCCTCCCCTCCGAC
CCCCACGCCCGCGCCGTCGCCCGATTCTGGGCGGCGTACATCGACGCCGAGTTCTTCGCG
CCGTGGAACAGGTCGTTCTACACGGCGTCGGAGGAGGAGAAGACGGCGGAGATGGGGAGG
GCGGCGGCGGCGCTGGCGACGATCGAGCGCGCGTTCGCGGAGCTGTCGAGGGGGAAGGGG
TTCTTCTCCGGCGAGGACAGGCCGGGGTTCGTCGACGTGGTGCTCGGCGGGTTCGTGGGC
TCGATGCGCGCGTACGGCACGGCGGTCGGCGTGGAGGTGCTCGACGCCGGGCGCACCCCG
CTGCTGGTGGCGTGGGCGGAGCGCGTCGCGGCGCTCGACGCCGCCAGGGGCGTCATCCCC
GACGTCGAACGCGTCGTCGAGCTCTCGCGCTACGCGAGGAAGAAGTAG

Peptide Sequence

PEP ID

Os07t0168300-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:3662374:3663407:1 gene:Os07g0168300 transcript:Os07t0168300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TAU GLUTATHIONE S-TRANSFERASE 11 description:Similar to Glutathione S-transferase GSTU6. (Os07t0168300-01)
Sequence

MAAGAGGDGGGELKLLGTWASPFVQRVRLALNLKGLAYEFIEEEIGGGKSELLLASNPVH
KKVPVLLHRSNPICESQVIVQYLDDAFPGGAAGGDLLPSDPHARAVARFWAAYIDAEFFA
PWNRSFYTASEEEKTAEMGRAAAALATIERAFAELSRGKGFFSGEDRPGFVDVVLGGFVG
SMRAYGTAVGVEVLDAGRTPLLVAWAERVAALDAARGVIPDVERVVELSRYARKK

Transcript Sequence

Transcript ID

Os07t0168300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:3662374:3663407:1 gene:Os07g0168300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TAU GLUTATHIONE S-TRANSFERASE 11 description:Similar to Glutathione S-transferase GSTU6. (Os07t0168300-01)
Sequence

ACGCACGAATCCAGTGACACACAGAGCTAGCTAGCGATGGCGGCCGGAGCCGGAGGAGAC
GGCGGCGGCGAGCTGAAGCTTCTGGGGACGTGGGCGAGCCCGTTCGTGCAGCGGGTGCGC
CTCGCGCTGAACCTCAAGGGCCTCGCGTACGAGTTCATCGAGGAGGAGATCGGCGGCGGC
AAGAGCGAGCTCCTCCTCGCCTCCAACCCCGTCCACAAGAAGGTCCCCGTCCTCCTCCAC
CGCAGCAACCCCATCTGCGAGTCCCAGGTCATCGTCCAGTACCTCGACGACGCCTTCCCC
GGCGGCGCCGCCGGCGGCGACCTCCTCCCCTCCGACCCCCACGCCCGCGCCGTCGCCCGA
TTCTGGGCGGCGTACATCGACGCCGAGTTCTTCGCGCCGTGGAACAGGTCGTTCTACACG
GCGTCGGAGGAGGAGAAGACGGCGGAGATGGGGAGGGCGGCGGCGGCGCTGGCGACGATC
GAGCGCGCGTTCGCGGAGCTGTCGAGGGGGAAGGGGTTCTTCTCCGGCGAGGACAGGCCG
GGGTTCGTCGACGTGGTGCTCGGCGGGTTCGTGGGCTCGATGCGCGCGTACGGCACGGCG
GTCGGCGTGGAGGTGCTCGACGCCGGGCGCACCCCGCTGCTGGTGGCGTGGGCGGAGCGC
GTCGCGGCGCTCGACGCCGCCAGGGGCGTCATCCCCGACGTCGAACGCGTCGTCGAGCTC
TCGCGCTACGCGAGGAAGAAGTAGACACGGTAACGATTTGTGTTGTCCTGTGGTGTTTGT
ATCGTCAAAATAAATGTGGCACAAAGGTTGTCATCATTAGTGAGCATTCTTGCCGGTTTC
TTCTCCAGTTTAAGTGTCTGTGTTGCTTTTGTTTGGACTGCGGGGATGTTAGAATATATG
GTAGTTAGAGTTATATTAGAATGGACTGATTTGTGTGGACTTCTTTCATATCTGTAATTC
TTTCTTATCTTCTCCCCATGTACTCCTATATATCGGCCCCTGAGGCTCAATATAATGGGT
CCAATATTCATAGT