Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0166100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:3561191:3569122:-1 gene:Os07g0166100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Membrane attack complex component/perforin/complement C9 family protein. (Os07t0166100-01)
Sequence	ATGGCATACAGAGCAATGCTGCAAAGTGCTGCGGAGTCTGCTATACAGTCCATTGGTCTT GGTTACGACATTGCTCATGATATACGTCTCAAGTATTGCAAGCAGCGCAGTTCGCCTGAC CCGTTGCTCATTGAGCTTGACCATGACGAGGTTCAGGATATTGTGCTCCCTGGTGGACTG ACAGTTGCAGGCGTGTCCAAGTCGATTAAGTGTGACAAAGGGGAGCGGACGCGGTTCCGG TCCGATGTCCTGTCATTTCAGCAGATGTCGGAGCAATTCAACCAGGAATTATCTTTGTCT GGGAAAATTCCATCTGGTTTATTCAATACTATGTTTGAATTTACTGGCTGCTGGCAGAAA GATGCTGCTAATACCAAGTCACTTGCCTTTGATGGTTGGTGTATCACACTGTACACTGTT GCACTCTCAAAGGCACAGATTGTACTCCGGGATCATGTTAAGCAGGCTGTTCCATCAACA TGGGAACCTGCTGCATTAGCAAGGTTTATTAGAAAGTTTGGTACTCATGTAGTTGTTGGT ATAAAAATGGGAGGCAAGGATATAATTTATTTAAAACAACAGCATTCATCAACTTTGCAA GCTGTTGATGTTCAAAAACGATTGAAGGAGATGTCAGACCGAAGATTTCTTGATGCAAAC GGGCAATCTGACTTCAGTTTCAAGGATTCCTATGGAAAGGATAAGATTGACACAAGAGAG CATCGGCTGAGATTTGTGGACTCCAGTCCATTGAATTCTTACTCTTCAAAGGAGGATTTG GTGATGATGCCTAAGCGGAGAGGTGGAAGGGATAAAGATATCCTTTCTCACAGCGAGTGG CTGAATACTGTTCAGGCAGAACCTGATGTTATCTCAATGTCCTTCATACCTATTACTTCA CTGTTGAATGGAGTTCCTGGCTGTGGATTTTTAAACCATGCAATTAATCTGTACCTTCGA TATAAGCCTCAAATTGAAGAGCTGCACCAATTTTTGGAGTTCCAGCTTCCAAGGCAGTGG GCTCCTGTTTACAGTGACCTCCCTCTTGGTCCTCAGAGGAAAAGACAAAGCACTGTATCT TTACCAGTTAATTTAATTGGTCCAAAGCTTTATGTTTGTACCAACATGGTTGATGTGGGC AAAAGACCTGTTACAGGAATCCGGCTGTTTCTTGAAGGAAAAAGGAGCAACAAACTAGCT ATCCATCTCCAGCATCTCTGCTCTCTTCCTCAGATTCTTCAGCTTGAAGATGATCCTTAC AATGACCAAACTCCAGAAGCATATGACCGCAAGTACTACGAACCAATTGGCTCATGGAAG CGTTTCTCCCATGTCTGCACTGCACCAGTTGAATCAGATGACTCCTCCATTGTCACGGGG GCACAATTAGAAGTGGTTAGCCATGGCTTCAAGAAAATACTGTTCCTTCGCCTCCATTTC TCCAAGGTCTGCAACGCCACTTCCGTCAGGAACCCTGAGTGGGAAGGATCTCCAAACCTG GCTCAGAAATCGGGCCTCATCTCAACACTCATCAGCACACATTTCTCCACAGCAGCTCAA AAGCCCGCGCCTCGCCCTGCTGATGTGAACATCAACTCGGCAGTGTACCCTGGTGGACCC CCTGTTCCAGTGCAGACCCCAAAACTTCTCAAGTTTGTGGATCCAACAGAGATGATGCGT GGACCGCAGGATCTGCCAGGTTATTGGGTGGTCTCAGGTGCGAAGCTGCAGCTCGAGAGG GGCAAGATCTCGCTGCGGGTGAAGTACTCGCTCTTGACAGCAATGTTGCCTGACGACGAT GAGTTTGCGTTCGATGAAGAGTTTTAG

Peptide Sequence

PEP ID	Os07t0166100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:3561191:3569122:-1 gene:Os07g0166100 transcript:Os07t0166100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Membrane attack complex component/perforin/complement C9 family protein. (Os07t0166100-01)
Sequence	MAYRAMLQSAAESAIQSIGLGYDIAHDIRLKYCKQRSSPDPLLIELDHDEVQDIVLPGGL TVAGVSKSIKCDKGERTRFRSDVLSFQQMSEQFNQELSLSGKIPSGLFNTMFEFTGCWQK DAANTKSLAFDGWCITLYTVALSKAQIVLRDHVKQAVPSTWEPAALARFIRKFGTHVVVG IKMGGKDIIYLKQQHSSTLQAVDVQKRLKEMSDRRFLDANGQSDFSFKDSYGKDKIDTRE HRLRFVDSSPLNSYSSKEDLVMMPKRRGGRDKDILSHSEWLNTVQAEPDVISMSFIPITS LLNGVPGCGFLNHAINLYLRYKPQIEELHQFLEFQLPRQWAPVYSDLPLGPQRKRQSTVS LPVNLIGPKLYVCTNMVDVGKRPVTGIRLFLEGKRSNKLAIHLQHLCSLPQILQLEDDPY NDQTPEAYDRKYYEPIGSWKRFSHVCTAPVESDDSSIVTGAQLEVVSHGFKKILFLRLHF SKVCNATSVRNPEWEGSPNLAQKSGLISTLISTHFSTAAQKPAPRPADVNINSAVYPGGP PVPVQTPKLLKFVDPTEMMRGPQDLPGYWVVSGAKLQLERGKISLRVKYSLLTAMLPDDD EFAFDEEF

Transcript Sequence

Transcript ID	Os07t0166100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:3561191:3569122:-1 gene:Os07g0166100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Membrane attack complex component/perforin/complement C9 family protein. (Os07t0166100-01)
Sequence	GTTCCGCCTCCCCAATCCGTCCCCCGTCTCCTCGCCCGCCGCCCTCGACTCCCGTCTTCT CGCCTCCCGCTGGCATCCTGCTAGCAGAGGTGGCGCCGGCGTTCTCCTGCTCCCGCCGCA TTCGCTCACCGGTGAGCATCCTAATCCATCCCATCCGGCCTCGGCCTCGAGTTTCGTCTC CTCGCCGCCGCTTGCGCCGATCCCCATCCTGCGAGGAGAGGTGGCGCCCGGCGTCCTCCT GCTTCCACCGCATCGTCGCTCGCCGCTTCAGAGGATTATAGTGTCTGCTTCATTCGGAGG TTCATCGTCGCCAAAAATAAATAAAATTTGGCCGTGTCAACTCTACAATTAGGAAGGTTT CGGATTTCTCAACGTGGAATGATAAGAAATGGCATACAGAGCAATGCTGCAAAGTGCTGC GGAGTCTGCTATACAGTCCATTGGTCTTGGTTACGACATTGCTCATGATATACGTCTCAA GTATTGCAAGCAGCGCAGTTCGCCTGACCCGTTGCTCATTGAGCTTGACCATGACGAGGT TCAGGATATTGTGCTCCCTGGTGGACTGACAGTTGCAGGCGTGTCCAAGTCGATTAAGTG TGACAAAGGGGAGCGGACGCGGTTCCGGTCCGATGTCCTGTCATTTCAGCAGATGTCGGA GCAATTCAACCAGGAATTATCTTTGTCTGGGAAAATTCCATCTGGTTTATTCAATACTAT GTTTGAATTTACTGGCTGCTGGCAGAAAGATGCTGCTAATACCAAGTCACTTGCCTTTGA TGGTTGGTGTATCACACTGTACACTGTTGCACTCTCAAAGGCACAGATTGTACTCCGGGA TCATGTTAAGCAGGCTGTTCCATCAACATGGGAACCTGCTGCATTAGCAAGGTTTATTAG AAAGTTTGGTACTCATGTAGTTGTTGGTATAAAAATGGGAGGCAAGGATATAATTTATTT AAAACAACAGCATTCATCAACTTTGCAAGCTGTTGATGTTCAAAAACGATTGAAGGAGAT GTCAGACCGAAGATTTCTTGATGCAAACGGGCAATCTGACTTCAGTTTCAAGGATTCCTA TGGAAAGGATAAGATTGACACAAGAGAGCATCGGCTGAGATTTGTGGACTCCAGTCCATT GAATTCTTACTCTTCAAAGGAGGATTTGGTGATGATGCCTAAGCGGAGAGGTGGAAGGGA TAAAGATATCCTTTCTCACAGCGAGTGGCTGAATACTGTTCAGGCAGAACCTGATGTTAT CTCAATGTCCTTCATACCTATTACTTCACTGTTGAATGGAGTTCCTGGCTGTGGATTTTT AAACCATGCAATTAATCTGTACCTTCGATATAAGCCTCAAATTGAAGAGCTGCACCAATT TTTGGAGTTCCAGCTTCCAAGGCAGTGGGCTCCTGTTTACAGTGACCTCCCTCTTGGTCC TCAGAGGAAAAGACAAAGCACTGTATCTTTACCAGTTAATTTAATTGGTCCAAAGCTTTA TGTTTGTACCAACATGGTTGATGTGGGCAAAAGACCTGTTACAGGAATCCGGCTGTTTCT TGAAGGAAAAAGGAGCAACAAACTAGCTATCCATCTCCAGCATCTCTGCTCTCTTCCTCA GATTCTTCAGCTTGAAGATGATCCTTACAATGACCAAACTCCAGAAGCATATGACCGCAA GTACTACGAACCAATTGGCTCATGGAAGCGTTTCTCCCATGTCTGCACTGCACCAGTTGA ATCAGATGACTCCTCCATTGTCACGGGGGCACAATTAGAAGTGGTTAGCCATGGCTTCAA GAAAATACTGTTCCTTCGCCTCCATTTCTCCAAGGTCTGCAACGCCACTTCCGTCAGGAA CCCTGAGTGGGAAGGATCTCCAAACCTGGCTCAGAAATCGGGCCTCATCTCAACACTCAT CAGCACACATTTCTCCACAGCAGCTCAAAAGCCCGCGCCTCGCCCTGCTGATGTGAACAT CAACTCGGCAGTGTACCCTGGTGGACCCCCTGTTCCAGTGCAGACCCCAAAACTTCTCAA GTTTGTGGATCCAACAGAGATGATGCGTGGACCGCAGGATCTGCCAGGTTATTGGGTGGT CTCAGGTGCGAAGCTGCAGCTCGAGAGGGGCAAGATCTCGCTGCGGGTGAAGTACTCGCT CTTGACAGCAATGTTGCCTGACGACGATGAGTTTGCGTTCGATGAAGAGTTTTAGAACCA TGAAACCGAGCGAAGAAAAGAAACCCACCTCATTTTGTTTTTATCATTTATGTGCAGCTA ACAGCAGGAACTCGAATGCTCAATCTAGGATTTTCGTAGCATTTGTAAGTGAACTAGCTG GAAGTCTATGTTGTATACAGTTGCGGGTTTGAAACATGGAAGCAGAAATGAACGGTCTCT GGCTTGGATGACGCGAGAGTTTGTTGT