Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0165000-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:3483093:3485872:1 gene:Os07g0165000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prolyl-tRNA synthetase. (Os07t0165000-01)
Sequence	GTAAGACCAACTAGTGAGACCATCGTAAACCACATGTTCACCAAATGGATACAGAGCTAC CGCGATCTTCCTCTCATGATTAACCAGTGGGCTAATGTCACAAGATGGGAAATGAGGACT AAGCCATTCATCAGAACTCTTGAATTTCTATGGCAAGAAGGTCATACAGCTCATGCCACC CTTGAAGAGGCAGAAAAGGAGGCAATGCAAATGATTGATGTATATACAAAATTTGCATAC GAGCAAGCTGCAATCCCTGTTATTCCGGGTCGAAAATCAAGAGTGGAAACGTTTGCTGGT GCTAATCGGACCTACACTATAGAAGCTATGATGGGTGACAGGAAGGCTTTACAGGCTGGA ACCAGCCACAACCTTGGACAGAACTTCTCCCGTGCCTTTGGAACACAGTTTATGGATGAA AATAGCCAAATCGAACATGTTTGGCAGACTTCTTGGGCTATTAGCACTCGGTTTGTTGGT GGGATCATCATGACCCATGGTGATGATGCTGGCTTAATGCTTCCGCCAAATATTGCACCC ATCCAGGTGGTAATAGTGCCTATATGGAAAAAGGGAGATGAAAAGAGTGCTGTTATGGAA GCTGTGTCTTCAGTTCAAAACACACTCAAAGAAGCAGGAATTAGAGTCAAAGTGGATGAC TCGGAGTTGCGGACACCAGGATGGAAGTTCAATTTTTACGAGATGAAGGGAGTTCCTATA AGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGTTGTTATTTCTAGGCGAGAT ATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTGGAC CATATAAAAGGTCGTCTAGTGGAAATCCAAGCATCCCTTCTACAGAAGGCCATTGCATTC CGTGATAGTAACATAGTTGATGTAAGCTCATATGGAGAACTGAAGGAGGCCATTGCCGAG GGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAAGAA GAGACCAGCGCCACCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAAATGC TTCATGACTGGCAATCCAGCCGAGGAAGTTGCAATTTTTGCGAAGTCGTATTAG

Peptide Sequence

PEP ID	Os07t0165000-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:3483093:3485872:1 gene:Os07g0165000 transcript:Os07t0165000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prolyl-tRNA synthetase. (Os07t0165000-01)
Sequence	VRPTSETIVNHMFTKWIQSYRDLPLMINQWANVTRWEMRTKPFIRTLEFLWQEGHTAHAT LEEAEKEAMQMIDVYTKFAYEQAAIPVIPGRKSRVETFAGANRTYTIEAMMGDRKALQAG TSHNLGQNFSRAFGTQFMDENSQIEHVWQTSWAISTRFVGGIIMTHGDDAGLMLPPNIAP IQVVIVPIWKKGDEKSAVMEAVSSVQNTLKEAGIRVKVDDSELRTPGWKFNFYEMKGVPI RLEIGPRDVTNKSVVISRRDIPGKQGKEFGVSMDPSILVDHIKGRLVEIQASLLQKAIAF RDSNIVDVSSYGELKEAIAEGKWARGPWSASDADELKVKEETSATIRCFPFEQPEGAKKC FMTGNPAEEVAIFAKSY

Transcript Sequence

Transcript ID	Os07t0165000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:3483093:3485872:1 gene:Os07g0165000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prolyl-tRNA synthetase. (Os07t0165000-01)
Sequence	TTAGTCCAGAGCTTGCATTAGTTACCATTGGAGGAGGAAAGGAACTAGAGGAAAAGCTTG TGGGCTTTGTAGGTAAGACCAACTAGTGAGACCATCGTAAACCACATGTTCACCAAATGG ATACAGAGCTACCGCGATCTTCCTCTCATGATTAACCAGTGGGCTAATGTCACAAGATGG GAAATGAGGACTAAGCCATTCATCAGAACTCTTGAATTTCTATGGCAAGAAGGTCATACA GCTCATGCCACCCTTGAAGAGGCAGAAAAGGAGGCAATGCAAATGATTGATGTATATACA AAATTTGCATACGAGCAAGCTGCAATCCCTGTTATTCCGGGTCGAAAATCAAGAGTGGAA ACGTTTGCTGGTGCTAATCGGACCTACACTATAGAAGCTATGATGGGTGACAGGAAGGCT TTACAGGCTGGAACCAGCCACAACCTTGGACAGAACTTCTCCCGTGCCTTTGGAACACAG TTTATGGATGAAAATAGCCAAATCGAACATGTTTGGCAGACTTCTTGGGCTATTAGCACT CGGTTTGTTGGTGGGATCATCATGACCCATGGTGATGATGCTGGCTTAATGCTTCCGCCA AATATTGCACCCATCCAGGTGGTAATAGTGCCTATATGGAAAAAGGGAGATGAAAAGAGT GCTGTTATGGAAGCTGTGTCTTCAGTTCAAAACACACTCAAAGAAGCAGGAATTAGAGTC AAAGTGGATGACTCGGAGTTGCGGACACCAGGATGGAAGTTCAATTTTTACGAGATGAAG GGAGTTCCTATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGTTGTTATT TCTAGGCGAGATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCA ATACTGGTGGACCATATAAAAGGTCGTCTAGTGGAAATCCAAGCATCCCTTCTACAGAAG GCCATTGCATTCCGTGATAGTAACATAGTTGATGTAAGCTCATATGGAGAACTGAAGGAG GCCATTGCCGAGGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTG AAGGTGAAAGAAGAGACCAGCGCCACCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGC GCTAAGAAATGCTTCATGACTGGCAATCCAGCCGAGGAAGTTGCAATTTTTGCGAAGTCG TATTAGTTCATGCTTTCTCTAATAGTCTGGTTCCAAGGATCAAAGCATTTTTTTTCCAGC TATATTTTCTCCATTTTCCCAGATTCTCTGGGATCTTTTCTGATCATAAATTACCCATTG AATGCTTGTGCTTCTGATATTTCTAGTGTAAATTAGCGATCGAGTAGTTAAATCTCTGTC CTGCTTGTCGTATTAGGACAAAACTCACAACACGGTGCAATTGTATAATCAAAGTTCTCT TACTG