Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0164100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:3436026:3444708:-1 gene:Os07g0164100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase 704 description:Histone deacetylase superfamily protein. (Os07t0164100-01)
Sequence	ATGGCGTCTGATATGAGGTCACTCAACAGCCAAAAGGGACAGAGTTGTGGAGTTTCAGAC CAAGCTTGCCACAGCAAAAGCAAAAGCGGCAATGATGGAAAACCATCACATGCTAAAGCA AATGGAGTTTCCTCGTTGAGCGGGAGTCATAATGATGAGAAAATTTTGAAAGAGAACTCT GGAGCATGCAATTTAAATTCCGACCATGCCAATCCTTTATCAGTAGATGGGACCAAAGTT TCTACAGCAAGGTCGGAACTTATTGACAGTTCAGGCCATGATGGTTGTCTGCATGTCAAG AATGAAAGCTGTATGGCTTGTGATGATCTGCTTCAAGAGTCTGACAAAGAACAGCCTGGG GGTACACTGGAGGATCTATTTTCCTTTAATGATGAAGAGGATGATGACAGTGACTGGGAA CCCTCTGCTCGCCTTGCTTTGAGCAGGTGGTTTTGCTTGAACTGTACAGTGCCAAACATG GAGGGGTTTACACATTGTCAGAATTGCGATGAGCTTAAGGGATCTGTGGTAGTTGGATAT GATGCTTTCAAAGCTCATCTTGCACAGGCAGCTTTGTTATCTGCTGACGCAGCGCTGCCA TCAGTATCTACAGCTGTCGGTTTTGATGAAAGAATGTTGCTCCATAGTGAGATAGAGATT AAACCAAATCCACATCCAGAAAGGCCTGACCGCCTTCGTGCAATCGCTGCCAGTCTTGCT GCTGCAGGTATCTTCCCTTCAAAATGTGTCATGGTACCTCCTCGAGAAATCACTAAGGAA GAACTCCTAAGGGTCCATACTTCAGATCACATTGACAGTGTTGAGCAGACAAAGAACATG CTTTACAGTTACTTCACTTCAGATACCTATGCAAATGGACACTCAGCATGTGCTGCCAAA CTTGCAGCAGGGATATGTGCTGATCTTGCTAACTTGATAGTATCTGGGCGTGTTCGCAAT GGATTTGCAATGGTGAGACCTCCTGGCCATCATGCAGGGGTGAAACAAGCCATGGGTTTT TGTCTTCACAATAATGCAGCAGTGGCTGCATTAGCTGCACAAAGAGCTGGTGCCAAGAAA GTCTTAATAGTTGACTGGGATGTCCACCATGGCAATGGAACACAGGAGATATTTGATGGG GACAATTCTGTCTTGTACATATCATTACATCGGCATGAGGATGGAAGCTTCTACCCTGGA ACTGGGGCAGCAAATGAGGTGGGAGTTATGGATGGCCAAGGATTCTCAGTCAATATACCT TGGAGCCGTGGTGGTGTTGGAGACAATGACTACATATTTGCTTTTAAGCATGTGGTGCTT CCGATAGCTGCAGAATTTGCTCCAGACATCACCATCATATCTGCAGGATTTGATGCAGCG AGGGGTGACCCTCTGGGTTGTTGTGATGTCACACCTGCTGGATATTCTAGGATGGCGTCC ATGCTAACTGCTTGTTCACAGGGAAAATTGTTGGTTATACTTGAGGGAGGATACAATCTT CGGTCTATATCCTCATCAGCTACTGAAGTTGTTAAGGTCCTACTTGGGGATAGTCCTGTT TATGATACAGATGCAACTGAACCATCAGAGGAGGGCATACAGACTGTCTTACAAGTCCTG AGTATCCAGCAGCAATTTTGGCCAGTTTTAGTTCCATCCTTTGCATCAGTTCTGGCACTG CAGCGGTCGGTTTTTTCCAGATATACCACTGAAGTAAACAAGATGAAAAGGAAGCATGCA GGAGGGGCAGGACCCTTCTGGTGGAAATGGGGGAGTAAAAGGCTACTGTACGAAGTGCTA TTTGAGGGCCGCTGTCTGAGGAAAACCAAGGATACAGGCAAAGAAAAATTGAATGATGAA GCAGAGCCCTAA

Peptide Sequence

PEP ID	Os07t0164100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:3436026:3444708:-1 gene:Os07g0164100 transcript:Os07t0164100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase 704 description:Histone deacetylase superfamily protein. (Os07t0164100-01)
Sequence	MASDMRSLNSQKGQSCGVSDQACHSKSKSGNDGKPSHAKANGVSSLSGSHNDEKILKENS GACNLNSDHANPLSVDGTKVSTARSELIDSSGHDGCLHVKNESCMACDDLLQESDKEQPG GTLEDLFSFNDEEDDDSDWEPSARLALSRWFCLNCTVPNMEGFTHCQNCDELKGSVVVGY DAFKAHLAQAALLSADAALPSVSTAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLA AAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFTSDTYANGHSACAAK LAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAKK VLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGSFYPGTGAANEVGVMDGQGFSVNIP WSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMAS MLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLGDSPVYDTDATEPSEEGIQTVLQVL SIQQQFWPVLVPSFASVLALQRSVFSRYTTEVNKMKRKHAGGAGPFWWKWGSKRLLYEVL FEGRCLRKTKDTGKEKLNDEAEP

Transcript Sequence

Transcript ID	Os07t0164100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:3436026:3444708:-1 gene:Os07g0164100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase 704 description:Histone deacetylase superfamily protein. (Os07t0164100-01)
Sequence	GTGGCCGCGCCGCGCCCCTCCAAAAATCCAATCGCGAGAGGCGAGCGCCGCCGCCGCCGG GATCGCCCTCCAGATTGCGTTGCATGCTCTGATGGCGTCTGATATGAGGTCACTCAACAG CCAAAAGGGACAGAGTTGTGGAGTTTCAGACCAAGCTTGCCACAGCAAAAGCAAAAGCGG CAATGATGGAAAACCATCACATGCTAAAGCAAATGGAGTTTCCTCGTTGAGCGGGAGTCA TAATGATGAGAAAATTTTGAAAGAGAACTCTGGAGCATGCAATTTAAATTCCGACCATGC CAATCCTTTATCAGTAGATGGGACCAAAGTTTCTACAGCAAGGTCGGAACTTATTGACAG TTCAGGCCATGATGGTTGTCTGCATGTCAAGAATGAAAGCTGTATGGCTTGTGATGATCT GCTTCAAGAGTCTGACAAAGAACAGCCTGGGGGTACACTGGAGGATCTATTTTCCTTTAA TGATGAAGAGGATGATGACAGTGACTGGGAACCCTCTGCTCGCCTTGCTTTGAGCAGGTG GTTTTGCTTGAACTGTACAGTGCCAAACATGGAGGGGTTTACACATTGTCAGAATTGCGA TGAGCTTAAGGGATCTGTGGTAGTTGGATATGATGCTTTCAAAGCTCATCTTGCACAGGC AGCTTTGTTATCTGCTGACGCAGCGCTGCCATCAGTATCTACAGCTGTCGGTTTTGATGA AAGAATGTTGCTCCATAGTGAGATAGAGATTAAACCAAATCCACATCCAGAAAGGCCTGA CCGCCTTCGTGCAATCGCTGCCAGTCTTGCTGCTGCAGGTATCTTCCCTTCAAAATGTGT CATGGTACCTCCTCGAGAAATCACTAAGGAAGAACTCCTAAGGGTCCATACTTCAGATCA CATTGACAGTGTTGAGCAGACAAAGAACATGCTTTACAGTTACTTCACTTCAGATACCTA TGCAAATGGACACTCAGCATGTGCTGCCAAACTTGCAGCAGGGATATGTGCTGATCTTGC TAACTTGATAGTATCTGGGCGTGTTCGCAATGGATTTGCAATGGTGAGACCTCCTGGCCA TCATGCAGGGGTGAAACAAGCCATGGGTTTTTGTCTTCACAATAATGCAGCAGTGGCTGC ATTAGCTGCACAAAGAGCTGGTGCCAAGAAAGTCTTAATAGTTGACTGGGATGTCCACCA TGGCAATGGAACACAGGAGATATTTGATGGGGACAATTCTGTCTTGTACATATCATTACA TCGGCATGAGGATGGAAGCTTCTACCCTGGAACTGGGGCAGCAAATGAGGTGGGAGTTAT GGATGGCCAAGGATTCTCAGTCAATATACCTTGGAGCCGTGGTGGTGTTGGAGACAATGA CTACATATTTGCTTTTAAGCATGTGGTGCTTCCGATAGCTGCAGAATTTGCTCCAGACAT CACCATCATATCTGCAGGATTTGATGCAGCGAGGGGTGACCCTCTGGGTTGTTGTGATGT CACACCTGCTGGATATTCTAGGATGGCGTCCATGCTAACTGCTTGTTCACAGGGAAAATT GTTGGTTATACTTGAGGGAGGATACAATCTTCGGTCTATATCCTCATCAGCTACTGAAGT TGTTAAGGTCCTACTTGGGGATAGTCCTGTTTATGATACAGATGCAACTGAACCATCAGA GGAGGGCATACAGACTGTCTTACAAGTCCTGAGTATCCAGCAGCAATTTTGGCCAGTTTT AGTTCCATCCTTTGCATCAGTTCTGGCACTGCAGCGGTCGGTTTTTTCCAGATATACCAC TGAAGTAAACAAGATGAAAAGGAAGCATGCAGGAGGGGCAGGACCCTTCTGGTGGAAATG GGGGAGTAAAAGGCTACTGTACGAAGTGCTATTTGAGGGCCGCTGTCTGAGGAAAACCAA GGATACAGGCAAAGAAAAATTGAATGATGAAGCAGAGCCCTAAATGTGTTGCTGCTGAAG CCTGACTGCTGATCTCATCAACATCCATAGTGTAGTGGGCTGACTGGGGTTCCCTGAATG TAGCTTGCATATACCGAGCCAAATTTTGACTGGAGAATTAAGATGGTAGTTCGTGTTTTT AGGTGAAATTTGTGAACAACCTTGTTGACATGTATTGGATGTTCAGTTGTATTAGAAATA GAGTCAAGTTTACCATCCTGTCGTCTGTCGAATGATCCTGATGT