Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0163900-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:3426467:3428467:-1 gene:Os07g0163900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0163900-00)
Sequence	ATGCAGCTCGGCGCGCCACCGCCGGCGGCGGCGGCGGCGGCGGCTGCCGTCTGGCGAGCC CCCACCTTCGAGGCCCGCCGCGCCGCCGACGCGAGGGAGCTCCTTGCGGCGCTGCTTCCG CCGAGCCCCACCGTCCGCCAAGTCCAGCAGGCGCACGCCCGACTCGCCGTCCTCGGGCTC GCCGCCTCGCGCGCCATGCCCCACCTCCTCGCCGTCCTCCCCCGCCTCCTCCCGGACAAG CCGCGCCACCGCGGCGACGACGGCGGCGGCGATGGCGACCACTACGCCTACCCGCTCGCG CTGTTCCGGCGCGCCAACTCCACCTCCGCCTTCGCGTCCAACAACCTCCTCCGCGTGCTG CCGCATCCGCTCCCGCTCACCCTCTTCTCCCGCTTCCGGCGCCGCAACCCCCACTCCTTC ACCTTCCTCCTCGCCTCCATCTCCAACCACCTCAACGCCGCGGGACCCTCCGCCTCCGCT TGCTCCTTCCTGGGCTCCCACGTGCACGCCCTCGCCGTGAAGGCGGGCGCCGCGGGCGAC CTGTTCGTGCGGAACGCGCTGGTGCACTTCTACGGCGTCTCCGGCGACGTGGGGGCAATG CGGAGGGTGTTCGACGAGCTGCCGCGCGTGCGGGACGTCCTCACGTGGAACGAGGTTCTC GCGGGGTACGTGCGAGCTGGCATGATGACCGTTGCGCGGGAGGTGTTCGACGAAATGCCA GTGAGGGATGAGATTTCTTGGAGCACGCTGGTGGGCGGGTATGTGAAGGAAGAGGAGCTG GAGGTGGCGCTGGGAGTGTTCCGGAACATGGTGGAGCAGGGCGTGAGGCCGAATCAGGCT GCAGTGGTGACGGCATTGTCGGCAGCAGCACGGTTGGGCTTGCTTGAACATGGGAAGTTT GTGCATAATGTGGTACAGAGGTCGGGAATGCCGGTGTGTATGAATGTAGGAGCGGCACTC GTGGACATGTATGCAAAGTGCGGGTGTGTGGCGGTTGCGAGGGAGGTTTTCGATGGCATG AGGAGGAGGGATGTTTTCGCGTGGAACGCCATGATCTGTGGCCTTGCTGCTCATGGTTTG GGGAGGGATGCGGTGGAGCTCTTCGAGCGGTTTATCAGTGAGGGTCTGTCCCCTACAAAT GTGACTTTTGTTGGTGTGCTCAATGGCTGTAGCCGTTCTGGTCTTGTTGCTGAGGGGCGA CGCTATTTCAAACTGATAGTGGAGAAATATCGCATTGAGCCAGAAATGGAGCATTATGGC TGCATGGTTGATCTTCTGGGTCGTGCTGGCCTTGTTCCGGAAGCCATTGAATTGATCGAA GGGATGCATATTGCACCTGATCCAGTTCTCTGGGGCACAATACTCTCTTCTTGCAAGACG CATGGCCTGGTGGATTTGGGGGTTTCTGTTGGTAACAAGCTAATTGAACTGGATCCAACT CATTCTGGCTATTATGTCCTCCTCTCAGGTATATATGCAAAGGCAAACAAATGGGATGAA GTCAGGGAAGTCAGGAAATTGATGTCTAGTCGCGGTACCAACAAGTCAGCCGGCTGGAGC TTGATGGAAGCGCATGGGAAGGTGCACAAATTTCTAGTAGGAGACACTTATCACAAGGAT TCTGTGCAGATCTATGATACACTTGACATGATCAACAAAAGGTTGACAGAGGCAGGGTAT GTACCGGATGTGTCATCTGTATTGCATGACATTGGGGAGGAAGAGAAGGTGCACGCGGTC AAGGTGCACAGCGAGCGATTGGCAATTGCTTATGGCTTCATAGTTCTTGAAGCTGGCAGC CCAATCCGTATCGTCAAGAACCTTCGTGTCTGTGGGGATTGCCATGAGTTCAGTAAGATG GTGACAATGGTTTTTCAGAGGGAGATTATTGTGAGAGATGGTAGTAGGTTCCATCATATG AAAGAAGGGAAGTGCTCTTGCCTTGACTATTGGTAA

Peptide Sequence

PEP ID	Os07t0163900-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:3426467:3428467:-1 gene:Os07g0163900 transcript:Os07t0163900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0163900-00)
Sequence	MQLGAPPPAAAAAAAAVWRAPTFEARRAADARELLAALLPPSPTVRQVQQAHARLAVLGL AASRAMPHLLAVLPRLLPDKPRHRGDDGGGDGDHYAYPLALFRRANSTSAFASNNLLRVL PHPLPLTLFSRFRRRNPHSFTFLLASISNHLNAAGPSASACSFLGSHVHALAVKAGAAGD LFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMP VRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKF VHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGL GRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYG CMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPT HSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKD SVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHAVKVHSERLAIAYGFIVLEAGS PIRIVKNLRVCGDCHEFSKMVTMVFQREIIVRDGSRFHHMKEGKCSCLDYW

Transcript Sequence

Transcript ID	Os07t0163900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:3426467:3428467:-1 gene:Os07g0163900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0163900-00)
Sequence	ATGCAGCTCGGCGCGCCACCGCCGGCGGCGGCGGCGGCGGCGGCTGCCGTCTGGCGAGCC CCCACCTTCGAGGCCCGCCGCGCCGCCGACGCGAGGGAGCTCCTTGCGGCGCTGCTTCCG CCGAGCCCCACCGTCCGCCAAGTCCAGCAGGCGCACGCCCGACTCGCCGTCCTCGGGCTC GCCGCCTCGCGCGCCATGCCCCACCTCCTCGCCGTCCTCCCCCGCCTCCTCCCGGACAAG CCGCGCCACCGCGGCGACGACGGCGGCGGCGATGGCGACCACTACGCCTACCCGCTCGCG CTGTTCCGGCGCGCCAACTCCACCTCCGCCTTCGCGTCCAACAACCTCCTCCGCGTGCTG CCGCATCCGCTCCCGCTCACCCTCTTCTCCCGCTTCCGGCGCCGCAACCCCCACTCCTTC ACCTTCCTCCTCGCCTCCATCTCCAACCACCTCAACGCCGCGGGACCCTCCGCCTCCGCT TGCTCCTTCCTGGGCTCCCACGTGCACGCCCTCGCCGTGAAGGCGGGCGCCGCGGGCGAC CTGTTCGTGCGGAACGCGCTGGTGCACTTCTACGGCGTCTCCGGCGACGTGGGGGCAATG CGGAGGGTGTTCGACGAGCTGCCGCGCGTGCGGGACGTCCTCACGTGGAACGAGGTTCTC GCGGGGTACGTGCGAGCTGGCATGATGACCGTTGCGCGGGAGGTGTTCGACGAAATGCCA GTGAGGGATGAGATTTCTTGGAGCACGCTGGTGGGCGGGTATGTGAAGGAAGAGGAGCTG GAGGTGGCGCTGGGAGTGTTCCGGAACATGGTGGAGCAGGGCGTGAGGCCGAATCAGGCT GCAGTGGTGACGGCATTGTCGGCAGCAGCACGGTTGGGCTTGCTTGAACATGGGAAGTTT GTGCATAATGTGGTACAGAGGTCGGGAATGCCGGTGTGTATGAATGTAGGAGCGGCACTC GTGGACATGTATGCAAAGTGCGGGTGTGTGGCGGTTGCGAGGGAGGTTTTCGATGGCATG AGGAGGAGGGATGTTTTCGCGTGGAACGCCATGATCTGTGGCCTTGCTGCTCATGGTTTG GGGAGGGATGCGGTGGAGCTCTTCGAGCGGTTTATCAGTGAGGGTCTGTCCCCTACAAAT GTGACTTTTGTTGGTGTGCTCAATGGCTGTAGCCGTTCTGGTCTTGTTGCTGAGGGGCGA CGCTATTTCAAACTGATAGTGGAGAAATATCGCATTGAGCCAGAAATGGAGCATTATGGC TGCATGGTTGATCTTCTGGGTCGTGCTGGCCTTGTTCCGGAAGCCATTGAATTGATCGAA GGGATGCATATTGCACCTGATCCAGTTCTCTGGGGCACAATACTCTCTTCTTGCAAGACG CATGGCCTGGTGGATTTGGGGGTTTCTGTTGGTAACAAGCTAATTGAACTGGATCCAACT CATTCTGGCTATTATGTCCTCCTCTCAGGTATATATGCAAAGGCAAACAAATGGGATGAA GTCAGGGAAGTCAGGAAATTGATGTCTAGTCGCGGTACCAACAAGTCAGCCGGCTGGAGC TTGATGGAAGCGCATGGGAAGGTGCACAAATTTCTAGTAGGAGACACTTATCACAAGGAT TCTGTGCAGATCTATGATACACTTGACATGATCAACAAAAGGTTGACAGAGGCAGGGTAT GTACCGGATGTGTCATCTGTATTGCATGACATTGGGGAGGAAGAGAAGGTGCACGCGGTC AAGGTGCACAGCGAGCGATTGGCAATTGCTTATGGCTTCATAGTTCTTGAAGCTGGCAGC CCAATCCGTATCGTCAAGAACCTTCGTGTCTGTGGGGATTGCCATGAGTTCAGTAAGATG GTGACAATGGTTTTTCAGAGGGAGATTATTGTGAGAGATGGTAGTAGGTTCCATCATATG AAAGAAGGGAAGTGCTCTTGCCTTGACTATTGGTAAATGATCAGTTGATTCTTTTAGTGC CAACTAGCAGCTATACATGTT