Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0162500-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:3342219:3343596:-1 gene:Os07g0162500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os07t0162500-02)
Sequence

ATGGCGTCGTTGTCTGACCCGAACTCGCCGCCGCCGCACGTCGTCGAGGACTGCCGCGGC
GCGCTGCAGCTGCTCAGCGACGGCACGGTTGTCCGCGCCGCCGCGCCGCCGCCGCCGTTC
TACGTACGCTTGGACATCGACGACGGCCGCGTCGAGTGGAAGGACGTCGTGTACGACGCC
GCCCACGGCCTCGGCGTCCGCATGTACAGGCCGGCGGCGACGGGGGGAGCGGAGGAGAAG
CTGCCGGTGGTGGTGTACTTCCATGGCGGCGGCTTCTGCATCGGCTCCTGCACCTGGCCC
AACTTCCACGCCGGCTGCCTCCGCCTCGCCGCCGAGCTCCCCGCCGTGGTGCTCTCCTTC
GACTACCGCCTCGCGCCGGAGCACCGCCTGCCCGCCGCGCACGAGGACGCGGCGGCGGCG
CTCATCTGGCTCCGCGACCAGCTCCTCTCCGACCCGTGGCTCGCCGACGCGGCCGACGCG
CGCAAGGTGTTCGTCTCGGGGGAATCCGCCGGCGGCAACTTCGCGCACCACCTCGCCGTG
CGGTTCGGCGCGGCGGGGCTGGACCCGGTGAGGGTCGCCGGGTACGTCCTCCTCATGCCG
GCGTTCATCTCGGAGAGGCCGACGCCGTCGGAGCTGGCGGCGCCGGCCACCGCGTTCCTG
ACGCGCGACATGTGCGACCGCTACTGCCGCCTCGCGCTGCCCGCCGGCGCCGACAAGGAC
CACCCGCTCGTCAACCCGTTCGGGCCGGCGAGCCGGAGCCTGGAGGCGGTGGACGTCGGC
CGCGTGCTGGTGGTCGCCGCCGACGGCGACCTCCTCAGGGACAAGAACGTCGAGTACGCG
GAGCGGATGAAGGCGATGGGGAAGGACGTGGAGCTGGTGGTGTTCGCCGGCGAGGAGCAC
GCGTTCTTCGGCGTGAAGCCAATGTCGGCGGCCACCGGCGAGCTCGTCGAGGTCATCAGG
CGGTTCATCGCCGGCGCCGCCGCGTAA

Peptide Sequence

PEP ID

Os07t0162500-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:3342219:3343596:-1 gene:Os07g0162500 transcript:Os07t0162500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os07t0162500-02)
Sequence

MASLSDPNSPPPHVVEDCRGALQLLSDGTVVRAAAPPPPFYVRLDIDDGRVEWKDVVYDA
AHGLGVRMYRPAATGGAEEKLPVVVYFHGGGFCIGSCTWPNFHAGCLRLAAELPAVVLSF
DYRLAPEHRLPAAHEDAAAALIWLRDQLLSDPWLADAADARKVFVSGESAGGNFAHHLAV
RFGAAGLDPVRVAGYVLLMPAFISERPTPSELAAPATAFLTRDMCDRYCRLALPAGADKD
HPLVNPFGPASRSLEAVDVGRVLVVAADGDLLRDKNVEYAERMKAMGKDVELVVFAGEEH
AFFGVKPMSAATGELVEVIRRFIAGAAA

Transcript Sequence

Transcript ID

Os07t0162500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:3342219:3343596:-1 gene:Os07g0162500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os07t0162500-02)
Sequence

GATGCGCTCAGCTAGTTAGATAAGCATATTGAGCTTCGTTCGCAGCCAAGCAAACGCTCG
CGCGCGCAGCCGGCAATGGCGTCGTTGTCTGACCCGAACTCGCCGCCGCCGCACGTCGTC
GAGGACTGCCGCGGCGCGCTGCAGCTGCTCAGCGACGGCACGGTTGTCCGCGCCGCCGCG
CCGCCGCCGCCGTTCTACGTACGCTTGGACATCGACGACGGCCGCGTCGAGTGGAAGGAC
GTCGTGTACGACGCCGCCCACGGCCTCGGCGTCCGCATGTACAGGCCGGCGGCGACGGGG
GGAGCGGAGGAGAAGCTGCCGGTGGTGGTGTACTTCCATGGCGGCGGCTTCTGCATCGGC
TCCTGCACCTGGCCCAACTTCCACGCCGGCTGCCTCCGCCTCGCCGCCGAGCTCCCCGCC
GTGGTGCTCTCCTTCGACTACCGCCTCGCGCCGGAGCACCGCCTGCCCGCCGCGCACGAG
GACGCGGCGGCGGCGCTCATCTGGCTCCGCGACCAGCTCCTCTCCGACCCGTGGCTCGCC
GACGCGGCCGACGCGCGCAAGGTGTTCGTCTCGGGGGAATCCGCCGGCGGCAACTTCGCG
CACCACCTCGCCGTGCGGTTCGGCGCGGCGGGGCTGGACCCGGTGAGGGTCGCCGGGTAC
GTCCTCCTCATGCCGGCGTTCATCTCGGAGAGGCCGACGCCGTCGGAGCTGGCGGCGCCG
GCCACCGCGTTCCTGACGCGCGACATGTGCGACCGCTACTGCCGCCTCGCGCTGCCCGCC
GGCGCCGACAAGGACCACCCGCTCGTCAACCCGTTCGGGCCGGCGAGCCGGAGCCTGGAG
GCGGTGGACGTCGGCCGCGTGCTGGTGGTCGCCGCCGACGGCGACCTCCTCAGGGACAAG
AACGTCGAGTACGCGGAGCGGATGAAGGCGATGGGGAAGGACGTGGAGCTGGTGGTGTTC
GCCGGCGAGGAGCACGCGTTCTTCGGCGTGAAGCCAATGTCGGCGGCCACCGGCGAGCTC
GTCGAGGTCATCAGGCGGTTCATCGCCGGCGCCGCCGCGTAAGTGATCGTGATCGAGCGA
ACGCCGGCGACGGCGAGGTGGTTTGCCTCGTGCGCCACGTGTTCGTAGGCTTATTCCACA
GATGCGACATGGTGGCAGGCACTGTGTCCTTGCAACAATAATTGAGACAAGCTTAATTAC
TTCGTACTACATTTGTGTTTTTTTTTTTTGTGGTTACAAATTGGGCACAATGGCAAGCAA
CAAAGGTCGACAAATTTATGTCATTGTTGTGAAATAGTGGTCGCAGTTTATATGGCTGCG
AAGGAAGTGTGACAGTGACCGTAAGCAGAGGTAATAAAGTCAGCGTGCATTTATTATT