Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0162300-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:3324859:3329936:1 gene:Os07g0162300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RIO kinase. (Os07t0162300-01)
Sequence	ATGAAGAGGAGTGGTCGGACTCCGACGTGGCCGATGCGCTCGACTGGCTCGACGGCGCGG AGGCCGAACGCGCACGGCGGGGTGCTGTCCCGCCCGTTCCAGCCGATCTCCAACCGCACG CAGAAGCTCGCCTCGCACATCCGCGCCACACCCCTGGAGGAATGGGAAGGTAGAATGAAC GTGGGGATGTCAAATTCAGTGACGACTGCGATAAGGGACAGCATAAGGGAGACGGCAATT GGGAAAACAAGGAACACAGAGAAGGCTGATCGTGCTACAGTAGAACAGGCTATTGATCCA AGAACACGCATGGTTCTGTTCAAGATGTTAAACCGGGGGGTTTTTAATACCATAAATGGG TGCATTTCTACAGGGAAAGAGGCAAATGTCTATCATGCATCAAAGGCTGATGGCCAGGAG TTAGCGATCAAAGTCTATAAAACATCTGTCCTTGTTTTTAAGGATAGAGACCGATATGTC CATGGAGATTACCGCTTTAGACATGGTTACTGCAAGCATAATCCTCGGAAAATGGTGAAG ACCTGGGCTGAAAAGGAAATGAGAAATCTTTTACGAGTTGGAGCAGCTGGAATCCGATGC CCAAAACCATTGCTCCTGAGGCTTCATGTACTGGTGATGGAATTTATAGGAAAAGGAGGT TGGGCTGCTCCTCGTCTCAAGGATGCTGCTTTATCTGATGATAAGTTGCGTGAAAGTTAT TTTGAGTTAATTACGACAATGCGGACACTCTACCAAAAATGCAAACTGGTCCATGGTGAT CTGAGTGAATACAACATTCTTTATTTCGAGGGACACTTGTATATCATTGATGTTTCGCAG TCCGTTGACCTTGATCATCCTTCAGCGTTGGAATTCTTGAAGGAAGATTGCTTGCATGTT ACTGACTTCTTTAAAAAACGTGGTGTTGCTGTCATGTCAGTAACAGAACTATTTAATTTT GTGATTGATCAAAATATTGCTGATGAAGATGTTGATCATTACCTGGAAAAGATTCAGCAA AAGATGTTGGAAAATGGAGATATGGTTGCAAACGACGATGAAATCACCCCAACAGTCTTG GTTCAGACGCTGGATTATGTGAAGCAATGCGAAGCAGATATTGTCAACATGTCATTGATG CAACGCCCATCCTTCGCGAATGAACCAACAGCGGATAAGCTTTACAACCAACCATTGCTA GGATTTGTGCGGAATAAAAACGAGCCTACCAAAAACCAGCAAGTACAATCAGAAGAACCT TTGGATCTGCAAAATAAGTGCTCCTCGGAACATAGTGAATCTTGCACTAGTTCCGATGAA GACGGTTCATGGCATGAGATTTTGAAGGTGGGACCTGAGGAAAGGAAGGCTGCTCGGAAG GAAAACAAGAAGAAAGTAAAAGCAGAAAAGAGAGAAGCTCGCAAAGATAAGATCCCAAAG GCTGAGAAGAAGAAGAGGAAGAAAATGGCAAAAGCCAAGTGCAAGCGGTAG

Peptide Sequence

PEP ID	Os07t0162300-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:3324859:3329936:1 gene:Os07g0162300 transcript:Os07t0162300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RIO kinase. (Os07t0162300-01)
Sequence	MKRSGRTPTWPMRSTGSTARRPNAHGGVLSRPFQPISNRTQKLASHIRATPLEEWEGRMN VGMSNSVTTAIRDSIRETAIGKTRNTEKADRATVEQAIDPRTRMVLFKMLNRGVFNTING CISTGKEANVYHASKADGQELAIKVYKTSVLVFKDRDRYVHGDYRFRHGYCKHNPRKMVK TWAEKEMRNLLRVGAAGIRCPKPLLLRLHVLVMEFIGKGGWAAPRLKDAALSDDKLRESY FELITTMRTLYQKCKLVHGDLSEYNILYFEGHLYIIDVSQSVDLDHPSALEFLKEDCLHV TDFFKKRGVAVMSVTELFNFVIDQNIADEDVDHYLEKIQQKMLENGDMVANDDEITPTVL VQTLDYVKQCEADIVNMSLMQRPSFANEPTADKLYNQPLLGFVRNKNEPTKNQQVQSEEP LDLQNKCSSEHSESCTSSDEDGSWHEILKVGPEERKAARKENKKKVKAEKREARKDKIPK AEKKKRKKMAKAKCKR

Transcript Sequence

Transcript ID	Os07t0162300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:3324859:3329936:1 gene:Os07g0162300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RIO kinase. (Os07t0162300-01)
Sequence	CGTGTTGCCACGACCGTTCCAGGGTTTTGCTTCAACCATGGCGACCGCCGCCGCCGCCGC CGCCGTGTACCTTCCCGAGGTGGATAGCCGCTTCGCCGACGCCGACGAGGAGGAGGAGGA GGAAGCGACGGTGAGGCCAGTCGAGGTGGCCGAGAGTAAGGATCAGGAGGAGGTGGAGGA GGAGGAGGATGAAGAGGAGTGGTCGGACTCCGACGTGGCCGATGCGCTCGACTGGCTCGA CGGCGCGGAGGCCGAACGCGCACGGCGGGGTGCTGTCCCGCCCGTTCCAGCCGATCTCCA ACCGCACGCAGAAGCTCGCCTCGCACATCCGCGCCACACCCCTGGAGGAATGGGAAGGTA GAATGAACGTGGGGATGTCAAATTCAGTGACGACTGCGATAAGGGACAGCATAAGGGAGA CGGCAATTGGGAAAACAAGGAACACAGAGAAGGCTGATCGTGCTACAGTAGAACAGGCTA TTGATCCAAGAACACGCATGGTTCTGTTCAAGATGTTAAACCGGGGGGTTTTTAATACCA TAAATGGGTGCATTTCTACAGGGAAAGAGGCAAATGTCTATCATGCATCAAAGGCTGATG GCCAGGAGTTAGCGATCAAAGTCTATAAAACATCTGTCCTTGTTTTTAAGGATAGAGACC GATATGTCCATGGAGATTACCGCTTTAGACATGGTTACTGCAAGCATAATCCTCGGAAAA TGGTGAAGACCTGGGCTGAAAAGGAAATGAGAAATCTTTTACGAGTTGGAGCAGCTGGAA TCCGATGCCCAAAACCATTGCTCCTGAGGCTTCATGTACTGGTGATGGAATTTATAGGAA AAGGAGGTTGGGCTGCTCCTCGTCTCAAGGATGCTGCTTTATCTGATGATAAGTTGCGTG AAAGTTATTTTGAGTTAATTACGACAATGCGGACACTCTACCAAAAATGCAAACTGGTCC ATGGTGATCTGAGTGAATACAACATTCTTTATTTCGAGGGACACTTGTATATCATTGATG TTTCGCAGTCCGTTGACCTTGATCATCCTTCAGCGTTGGAATTCTTGAAGGAAGATTGCT TGCATGTTACTGACTTCTTTAAAAAACGTGGTGTTGCTGTCATGTCAGTAACAGAACTAT TTAATTTTGTGATTGATCAAAATATTGCTGATGAAGATGTTGATCATTACCTGGAAAAGA TTCAGCAAAAGATGTTGGAAAATGGAGATATGGTTGCAAACGACGATGAAATCACCCCAA CAGTCTTGGTTCAGACGCTGGATTATGTGAAGCAATGCGAAGCAGATATTGTCAACATGT CATTGATGCAACGCCCATCCTTCGCGAATGAACCAACAGCGGATAAGCTTTACAACCAAC CATTGCTAGGATTTGTGCGGAATAAAAACGAGCCTACCAAAAACCAGCAAGTACAATCAG AAGAACCTTTGGATCTGCAAAATAAGTGCTCCTCGGAACATAGTGAATCTTGCACTAGTT CCGATGAAGACGGTTCATGGCATGAGATTTTGAAGGTGGGACCTGAGGAAAGGAAGGCTG CTCGGAAGGAAAACAAGAAGAAAGTAAAAGCAGAAAAGAGAGAAGCTCGCAAAGATAAGA TCCCAAAGGCTGAGAAGAAGAAGAGGAAGAAAATGGCAAAAGCCAAGTGCAAGCGGTAGT CAATCTGTGTGTCGCACCAACAATGGTCAATATCATCAAAGCTAAATTAGCTATAAAAAT CTACTAAAGTTATCATATACTTTTCAGTAGATTACAAATGTGAGATGGCCTTTATGAATG TAATGCAATTGGAAGATGATTTTTAAATTGAGTATAATCCCTTGCAGCATGGAACT