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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0161700-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:3296830:3297367:1 gene:Os07g0161700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 26 description:VQ domain containing protein. (Os07t0161700-00)
Sequence

ATGTCGTCCACGTCATCGTCGCCGCCGCCGCCGTCGAAGGCAAAGAGGCGAGGCTGCATC
CATGGCGCAAGGCCGCAGCCGCTGATCGTGTCGTCGGCGCCGGCGGAGGCGAGCCGGCCG
TCCAAGAAACCCCGTGTCAGCGGCGGCGGCGGCGACACGGGGCCGGTGATCGTGTACGAG
CTCACGCCCAGGGTCGTCCACGTCGAGCAGGAGGAGTTCATGGCCGTCGTGCAGAAGCTC
ACCGGCGGCAAGCAGCAGCCGGCGGCGGCTTCAACCTTGACGACATTGCCGGCGGCTGAT
CAGGTGGCCGGAGGTGATCACGCCGCTGCAGCGGCGGCCGCCGCCGACCCACTGGTGCTC
ACGCTTGGGCAGCAGCGTCAGCCTGCTCCGGCGCCGGCGATCGACGGCGACCATCCGGCG
GCGCCGCCTCATTCTCCACCGGCGGATGCTTTTCTTCTGTCGCCCAGTAGTTTCTTCTTG
TCGCCAACCACGATGCATGCGTTACAAGAGTTGGCTGCTTTGTTCTAA

Peptide Sequence

PEP ID

Os07t0161700-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:3296830:3297367:1 gene:Os07g0161700 transcript:Os07t0161700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 26 description:VQ domain containing protein. (Os07t0161700-00)
Sequence

MSSTSSSPPPPSKAKRRGCIHGARPQPLIVSSAPAEASRPSKKPRVSGGGGDTGPVIVYE
LTPRVVHVEQEEFMAVVQKLTGGKQQPAAASTLTTLPAADQVAGGDHAAAAAAAADPLVL
TLGQQRQPAPAPAIDGDHPAAPPHSPPADAFLLSPSSFFLSPTTMHALQELAALF

Transcript Sequence

Transcript ID

Os07t0161700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:3296830:3297367:1 gene:Os07g0161700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 26 description:VQ domain containing protein. (Os07t0161700-00)
Sequence

CGATCGAACCATGTCGTCCACGTCATCGTCGCCGCCGCCGCCGTCGAAGGCAAAGAGGCG
AGGCTGCATCCATGGCGCAAGGCCGCAGCCGCTGATCGTGTCGTCGGCGCCGGCGGAGGC
GAGCCGGCCGTCCAAGAAACCCCGTGTCAGCGGCGGCGGCGGCGACACGGGGCCGGTGAT
CGTGTACGAGCTCACGCCCAGGGTCGTCCACGTCGAGCAGGAGGAGTTCATGGCCGTCGT
GCAGAAGCTCACCGGCGGCAAGCAGCAGCCGGCGGCGGCTTCAACCTTGACGACATTGCC
GGCGGCTGATCAGGTGGCCGGAGGTGATCACGCCGCTGCAGCGGCGGCCGCCGCCGACCC
ACTGGTGCTCACGCTTGGGCAGCAGCGTCAGCCTGCTCCGGCGCCGGCGATCGACGGCGA
CCATCCGGCGGCGCCGCCTCATTCTCCACCGGCGGATGCTTTTCTTCTGTCGCCCAGTAG
TTTCTTCTTGTCGCCAACCACGATGCATGCGTTACAAGAGTTGGCTGCTTTGTTCTAA