Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0161600-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:3288480:3293291:-1 gene:Os07g0161600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 17 description:Calcium-dependent protein kinase, Cold stress response (Os07t0161600-01)
Sequence	ATGGGGAACACCTGCGTCGGCCCCAGCTCCGCGGCGGACCGCCACGGCTTCTTCCACTCC GTCTCCCTCGCCGTGCTCTGGCGCCCCGGTGGCCGCGCCGAGCCGTCGCAGCCGCCGGGT TACCCGCCTCGGGAGTCGAGCCACTCCTCCGTCACCTCGTCCACGGCGCCCGAGCGCGTC ACCATCGCCGACTCCGACCTCTCCTCCTCCACCCCCAACAAGGGCGGGAATAAGCCCAAG GTGAGGCGCGTCCAGAGCGCGGGGCTCCTCGCCGACTCCGTCCTCAAGCGCGACTCCGAG CGGCTCAAGGACCTCTACACCCTGGGGAAGAAGCTCGGGCAGGGGCAGTTCGGGACCACG TACCAGTGCGTGGAGAAGGCCACGGGGAAGGTGCTCGCCTGCAAGTCCATCGCCAAGCGG AAGCTGGTCAGCGAGGAGGACGTGGAGGACGTGCGCCGGGAGATCCAGATCATGCACCAC CTCGCCGGCCACCCGAGCGTGGTCTCCATCGTCGGCGCGTACGAGGACGCCGTCGCCGTG CACCTCGTCATGGAGCTCTGCGCTGGCGGGGAGCTGTTTGATAGGATCGTGCAGCGCGGG CACTACTCCGAGAAGGCGGCCGCGCAGCTGGCGCGGGTGATCATCGGTGTCGTCGAGGCG TGCCATTCGCTCGGGGTGATGCACAGAGACCTCAAGCCGGAGAACTTCTTGTTTGTCAAC CATAAGGAGGACTCGCCACTCAAGACGATCGATTTTGGGCTTTCCATTTTCTTCAAGCCA GGCGAAAATTATTCGGATGTTGTTGGAAGTCCTTACTATGTTGCACCTGAGGTTCTGATG AAGCATTATGGCCGCGAGGTGGATGTATGGAGTGCTGGTGTAATCATTTATATCTTGCTT AGTGGAGTTCCTCCATTTTGGGATGAATCTGAACAAGGGATATTTGAAAAAGTTTTGAAA GGAGATCTTGATTTTTCATCTGATCCCTGGCCTGCTATCTCAGACAGTGCAAAGGATTTG GTGAGGAAAATGTTAAACCGTGATCCCAGAAAGAGATTGACTGCACATGAAGCTCTATGT CATCCTTGGGTTTGTGTTGATGGAGTTGCTCCTGATAAACCTCTTGATTCTGCTGTCTTA ACTAGATTGAAGCAATTTTCAGCAATGAACAAGCTAAAGAAGATGGCCCTTAGGGTCATT GCTGAAAATTTATCGGAAGATGAAATTGCGGGATTGAGAGAAATGTTCAAAATGTTGGAC ACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAAACTGGCTTGCGGAGAGTTGGT GCTAATTTGAAGGATTCGGAAATTACAACCCTAATGGAAGCGGCTGATATTGATAATAGT GGTTCAATAGATTATGGGGAGTTCATTGCTGCAACTATGCATCTGAACAAAGTTGAGAGA GAAGATAATCTTTTTGCAGCGTTTTCATACTTTGATAAAGACAGCAGTGGTTACATTACT CAAGATGAGCTACAAAAAGCCTGTGAGGAATTTGGCATAGGAGATGCACATCTGGAGGAT ATCATCAAAGATATTGATCAGGACAATGATGGCCGGATCGACTACAATGAATTTGTAACA ATGATGCAGAAAGGGAATAATCCACTAGGGAAAAAGGGGCAAGGCCAGCTAAGTTTTGGT CTAAGGGAAGCATTGAAGCTTGGTTAA

Peptide Sequence

PEP ID	Os07t0161600-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:3288480:3293291:-1 gene:Os07g0161600 transcript:Os07t0161600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 17 description:Calcium-dependent protein kinase, Cold stress response (Os07t0161600-01)
Sequence	MGNTCVGPSSAADRHGFFHSVSLAVLWRPGGRAEPSQPPGYPPRESSHSSVTSSTAPERV TIADSDLSSSTPNKGGNKPKVRRVQSAGLLADSVLKRDSERLKDLYTLGKKLGQGQFGTT YQCVEKATGKVLACKSIAKRKLVSEEDVEDVRREIQIMHHLAGHPSVVSIVGAYEDAVAV HLVMELCAGGELFDRIVQRGHYSEKAAAQLARVIIGVVEACHSLGVMHRDLKPENFLFVN HKEDSPLKTIDFGLSIFFKPGENYSDVVGSPYYVAPEVLMKHYGREVDVWSAGVIIYILL SGVPPFWDESEQGIFEKVLKGDLDFSSDPWPAISDSAKDLVRKMLNRDPRKRLTAHEALC HPWVCVDGVAPDKPLDSAVLTRLKQFSAMNKLKKMALRVIAENLSEDEIAGLREMFKMLD TDNSGQITLEELKTGLRRVGANLKDSEITTLMEAADIDNSGSIDYGEFIAATMHLNKVER EDNLFAAFSYFDKDSSGYITQDELQKACEEFGIGDAHLEDIIKDIDQDNDGRIDYNEFVT MMQKGNNPLGKKGQGQLSFGLREALKLG

Transcript Sequence

Transcript ID	Os07t0161600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:3288480:3293291:-1 gene:Os07g0161600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 17 description:Calcium-dependent protein kinase, Cold stress response (Os07t0161600-01)
Sequence	TGTCAGTGGGACGTGGCCCAGCTCACCTCGTCCCCCTCCGGCCATCTCCCCTCTCCTCCA CCAAAATCCTCCTCCGATCCAAATCCACCAACCCTCGCCGCCGCCGCCACCGCCGCCTAT GCCGCCGCCGCCGTCGCCGGCTGCCTAGGGTTACGGCGGCCGCAGCTCCCCCCCACTTCG CCGGCGCGATGGGGAACACCTGCGTCGGCCCCAGCTCCGCGGCGGACCGCCACGGCTTCT TCCACTCCGTCTCCCTCGCCGTGCTCTGGCGCCCCGGTGGCCGCGCCGAGCCGTCGCAGC CGCCGGGTTACCCGCCTCGGGAGTCGAGCCACTCCTCCGTCACCTCGTCCACGGCGCCCG AGCGCGTCACCATCGCCGACTCCGACCTCTCCTCCTCCACCCCCAACAAGGGCGGGAATA AGCCCAAGGTGAGGCGCGTCCAGAGCGCGGGGCTCCTCGCCGACTCCGTCCTCAAGCGCG ACTCCGAGCGGCTCAAGGACCTCTACACCCTGGGGAAGAAGCTCGGGCAGGGGCAGTTCG GGACCACGTACCAGTGCGTGGAGAAGGCCACGGGGAAGGTGCTCGCCTGCAAGTCCATCG CCAAGCGGAAGCTGGTCAGCGAGGAGGACGTGGAGGACGTGCGCCGGGAGATCCAGATCA TGCACCACCTCGCCGGCCACCCGAGCGTGGTCTCCATCGTCGGCGCGTACGAGGACGCCG TCGCCGTGCACCTCGTCATGGAGCTCTGCGCTGGCGGGGAGCTGTTTGATAGGATCGTGC AGCGCGGGCACTACTCCGAGAAGGCGGCCGCGCAGCTGGCGCGGGTGATCATCGGTGTCG TCGAGGCGTGCCATTCGCTCGGGGTGATGCACAGAGACCTCAAGCCGGAGAACTTCTTGT TTGTCAACCATAAGGAGGACTCGCCACTCAAGACGATCGATTTTGGGCTTTCCATTTTCT TCAAGCCAGGCGAAAATTATTCGGATGTTGTTGGAAGTCCTTACTATGTTGCACCTGAGG TTCTGATGAAGCATTATGGCCGCGAGGTGGATGTATGGAGTGCTGGTGTAATCATTTATA TCTTGCTTAGTGGAGTTCCTCCATTTTGGGATGAATCTGAACAAGGGATATTTGAAAAAG TTTTGAAAGGAGATCTTGATTTTTCATCTGATCCCTGGCCTGCTATCTCAGACAGTGCAA AGGATTTGGTGAGGAAAATGTTAAACCGTGATCCCAGAAAGAGATTGACTGCACATGAAG CTCTATGTCATCCTTGGGTTTGTGTTGATGGAGTTGCTCCTGATAAACCTCTTGATTCTG CTGTCTTAACTAGATTGAAGCAATTTTCAGCAATGAACAAGCTAAAGAAGATGGCCCTTA GGGTCATTGCTGAAAATTTATCGGAAGATGAAATTGCGGGATTGAGAGAAATGTTCAAAA TGTTGGACACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAAACTGGCTTGCGGA GAGTTGGTGCTAATTTGAAGGATTCGGAAATTACAACCCTAATGGAAGCGGCTGATATTG ATAATAGTGGTTCAATAGATTATGGGGAGTTCATTGCTGCAACTATGCATCTGAACAAAG TTGAGAGAGAAGATAATCTTTTTGCAGCGTTTTCATACTTTGATAAAGACAGCAGTGGTT ACATTACTCAAGATGAGCTACAAAAAGCCTGTGAGGAATTTGGCATAGGAGATGCACATC TGGAGGATATCATCAAAGATATTGATCAGGACAATGATGGCCGGATCGACTACAATGAAT TTGTAACAATGATGCAGAAAGGGAATAATCCACTAGGGAAAAAGGGGCAAGGCCAGCTAA GTTTTGGTCTAAGGGAAGCATTGAAGCTTGGTTAATGGAATAACTACCCCTGAATGTAGA ATGGAGTGCTATTTAGTAAAGGACGAAGACTGAATTCAAGAAAGCAGAAGATCAAAGACA AACGTTGGTGTTACTCCTTTATCAACACTCTGTGAAGATACAAACTAACTTTTTGGGTTC CATCAGCCGGACACACAAGAAAGCCACGTACTTGGGTTTCTTCAAAGAGTTCAACATCCG TGGACCCTCCAACCGTATAGGTGTTTTTTTTTCCTTTTTTAAATAGGCACAACTCACAAG AATAGCGTGTGTGTTGTTTCATACTTTCATGTCCTCCTTTTCCGTTCTGGAAACCCTTGT AGGATGCTCTGCTGAGACGGTGAAGCTTTGACACGCTTGGAACTTCGGATTGGAGAGTTG GACGAGATTCCTTTGCATTGGAGAGTTGTATAGTTGCTAGTATTGAAATGTTGTAAGAAT TCGTAGGTTGTAACATAAACAGTAAAATGAATGAAATGGTTGTTTTAGT