Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0160600-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:3258325:3262106:1 gene:Os07g0160600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 description:FAS1 domain domain containing protein. (Os07t0160600-01)
Sequence	ATGGGCGTCTCCGCCCTGCTGCTCCTCCTCCTCGCCGCGGCCGCCACCGCCGCGCCGCCG GAGCAGCCCGCATTGTCCGCTACTCCCTCCTCCGCCGCCGCCGCCAACAACAGCAGCGGT GGTGGTGGTGGTGCGGCGAGCAACGGGGTGAACTCGAACTCGGTGCTGGTGGCGCTGCTG GACTCGCACTACACGGAGCTGGCCGAGCTGGTGGAGAAGGCGCTGCTGCTGCAGACGCTG GAGGACGCCGTCGGGAAGGGGAACGTCACCATCTTCGCGCCGCGGAACGAGGCGCTCGAG CGCGACCTCGACCCGGAGTTTCGCCGCTTCCTCCTCGAGCCCCGCAACCTCCGCTCGCTG CAGCGGCTCCTCCTCTTCCACGTCCTCCCCGCCCGCCTCCACGCCTCCGACTCCTCCTCC CCCGACTTCCCCTCCTCCCACCCCACCCTCTCCGGCGAGCGCGTCGACCTCTCCGCCTCG CCGATGCGGGTCGGCGCCGCGGCGGTCACGCGGCCCGACGCGGTGGTGCGCCCCGACGGC GTCATCCACGGGATCGAGCGGCTGCTGGTCCCGCGCTCCGTGCAGGAGGATTTCAACCGC CGCCGCAGCCTCGCCGCGATCTCGGCGGTGCTCCCGACGGGGGCGCCCGAGGTGGATCCG AGGACGCACCGCCTCAAGAAGCCCGCGCCGCCCGTCCCCCCCGGCGCGCCGCCGGTGCTG CCGATCTGGGACGCGATGGCGCCGGGCCCATCCATCGCGCCGGCCCCCGCGCCGGGGCCC GGGTCCGGGAAACACCACTTCGACGGGCACAGCCAGGTGAAGGACTTCATCCAGACGCTC CTCCTCTACGGCGGCTACAACGAGCTCGCCGACATCCTCGTCAACCTCACCTCGCTCGCC ACCGAGATGGGCCGCCTCGTCTCCGAGGGGTACGTGCTCACCGTGCTGGCGCCCAACGAC GAGGCCATGGCGCGGCTCACCACCGACCAGCTCAGCGAGCCGGGGTCGCCGGAGAACATC CTCTACTACCACATGATCCCGGAGTACCAGACGGAGGAGAGCATGTACAACGCGGTGCGC CGCTTCGGGAAGGTGAGGTACGACACGCTGCGGCTGCCCAACAAGGTGACGGCGAGGGAG GCCGACGGGTCGGTCAAGTTCGGCCATGGCGAGGGCTCCGCCTACCTGTTCGACCCGGAC ATCTACACCGACGGGAGGATCTCCGTGCAGGGCATCGACGCCGTGCTCTTCCCTCCCAAG GACACCGCCACCGGCGGCGAAGGCTCAGGCTCCGGCTCGTCGGGCGCCGCTCCCGCCAGG AAGGCCCCCGCCGTCACCGCCCACTCCAAGTCCAAGCTCCGACGAGGGAAGTTGTTGGAA GGGGCATGCCAAGTGATGGGCTTCCTAGGCCGAAGATCGCGATTCGCGAGCTGCCAATAG

Peptide Sequence

PEP ID	Os07t0160600-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:3258325:3262106:1 gene:Os07g0160600 transcript:Os07t0160600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 description:FAS1 domain domain containing protein. (Os07t0160600-01)
Sequence	MGVSALLLLLLAAAATAAPPEQPALSATPSSAAAANNSSGGGGGAASNGVNSNSVLVALL DSHYTELAELVEKALLLQTLEDAVGKGNVTIFAPRNEALERDLDPEFRRFLLEPRNLRSL QRLLLFHVLPARLHASDSSSPDFPSSHPTLSGERVDLSASPMRVGAAAVTRPDAVVRPDG VIHGIERLLVPRSVQEDFNRRRSLAAISAVLPTGAPEVDPRTHRLKKPAPPVPPGAPPVL PIWDAMAPGPSIAPAPAPGPGSGKHHFDGHSQVKDFIQTLLLYGGYNELADILVNLTSLA TEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMIPEYQTEESMYNAVR RFGKVRYDTLRLPNKVTAREADGSVKFGHGEGSAYLFDPDIYTDGRISVQGIDAVLFPPK DTATGGEGSGSGSSGAAPARKAPAVTAHSKSKLRRGKLLEGACQVMGFLGRRSRFASCQ

Transcript Sequence

Transcript ID	Os07t0160600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:3258325:3262106:1 gene:Os07g0160600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 description:FAS1 domain domain containing protein. (Os07t0160600-01)
Sequence	CTCCCACGAGACAGCACAAACCCAATCCCATCCACCAACCACCTCGCCGCCGTCGCCGCC GCCGCAGCCATGGGCGTCTCCGCCCTGCTGCTCCTCCTCCTCGCCGCGGCCGCCACCGCC GCGCCGCCGGAGCAGCCCGCATTGTCCGCTACTCCCTCCTCCGCCGCCGCCGCCAACAAC AGCAGCGGTGGTGGTGGTGGTGCGGCGAGCAACGGGGTGAACTCGAACTCGGTGCTGGTG GCGCTGCTGGACTCGCACTACACGGAGCTGGCCGAGCTGGTGGAGAAGGCGCTGCTGCTG CAGACGCTGGAGGACGCCGTCGGGAAGGGGAACGTCACCATCTTCGCGCCGCGGAACGAG GCGCTCGAGCGCGACCTCGACCCGGAGTTTCGCCGCTTCCTCCTCGAGCCCCGCAACCTC CGCTCGCTGCAGCGGCTCCTCCTCTTCCACGTCCTCCCCGCCCGCCTCCACGCCTCCGAC TCCTCCTCCCCCGACTTCCCCTCCTCCCACCCCACCCTCTCCGGCGAGCGCGTCGACCTC TCCGCCTCGCCGATGCGGGTCGGCGCCGCGGCGGTCACGCGGCCCGACGCGGTGGTGCGC CCCGACGGCGTCATCCACGGGATCGAGCGGCTGCTGGTCCCGCGCTCCGTGCAGGAGGAT TTCAACCGCCGCCGCAGCCTCGCCGCGATCTCGGCGGTGCTCCCGACGGGGGCGCCCGAG GTGGATCCGAGGACGCACCGCCTCAAGAAGCCCGCGCCGCCCGTCCCCCCCGGCGCGCCG CCGGTGCTGCCGATCTGGGACGCGATGGCGCCGGGCCCATCCATCGCGCCGGCCCCCGCG CCGGGGCCCGGGTCCGGGAAACACCACTTCGACGGGCACAGCCAGGTGAAGGACTTCATC CAGACGCTCCTCCTCTACGGCGGCTACAACGAGCTCGCCGACATCCTCGTCAACCTCACC TCGCTCGCCACCGAGATGGGCCGCCTCGTCTCCGAGGGGTACGTGCTCACCGTGCTGGCG CCCAACGACGAGGCCATGGCGCGGCTCACCACCGACCAGCTCAGCGAGCCGGGGTCGCCG GAGAACATCCTCTACTACCACATGATCCCGGAGTACCAGACGGAGGAGAGCATGTACAAC GCGGTGCGCCGCTTCGGGAAGGTGAGGTACGACACGCTGCGGCTGCCCAACAAGGTGACG GCGAGGGAGGCCGACGGGTCGGTCAAGTTCGGCCATGGCGAGGGCTCCGCCTACCTGTTC GACCCGGACATCTACACCGACGGGAGGATCTCCGTGCAGGGCATCGACGCCGTGCTCTTC CCTCCCAAGGACACCGCCACCGGCGGCGAAGGCTCAGGCTCCGGCTCGTCGGGCGCCGCT CCCGCCAGGAAGGCCCCCGCCGTCACCGCCCACTCCAAGTCCAAGCTCCGACGAGGGAAG TTGTTGGAAGGGGCATGCCAAGTGATGGGCTTCCTAGGCCGAAGATCGCGATTCGCGAGC TGCCAATAGACTACGACAATGGCTTGATGGACAAATATGTATATCTGCCACTGCTTTTTG CTCAACTCATGACGCTGAAACATGAACCGAAATGAAGGCTACAGATGATGATTGGTTGGA TGGATGAATGGACGAACAAATTGATGATGGTTTTACATAAGCTTAATTAAGAGGAAGAAA TAAGGTGTCATGAGAACGAGTTGAGAGAGACGGATGGCAGACATTCTGGTTGGTTGTTGG AGGTGGAAAAAAAAAAGGATGGAAATTTGTTTATACTGGTCAGTGAAGATCAAACACCGA TGTATAGCAATTAAACTTTTCTATTTTTTTATTTGTTTTATTTTATTTTGTTGATGATGA TGTTCAGCGCTTTTTGATAATGAGGAATGCCAAAAACAAAAATTGCAGTGTT