Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0160000-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:3207022:3214064:1 gene:Os07g0160000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin carboxyl-terminal hydrolase. (Os07t0160000-00)
Sequence	ATGGCCACCGCCGCCACCGCCCAGGCCTCCGCCTCCTCCTCCACCGCCTCCACCCGCGGC TCCCCCGCCGCCTCCTCCTCCTCCCACTCCGCCGTCTGCCTCGTCCCCTTCAGGTGGTGG GCGAGGGTGAGGGAGGAGGCGCCGCCGGAAGGCGGGGTGAGGTACGCGGCGACCGCGGCG GCGTCGCCCTCGTCGTACTACGGGCTTCGCTTGCTCCACAGCTTCCTCCACCCGGATCTC GTGCTTCGCCTCGAGCGCGGGGGTTGCCGCGGCACGGGTGCCGGCGCCGGGGGGCGGAGC TACGCGCTCGTGCCGGCCGACGAGCTCTCGCGTGTGCTCGCGAGGCAAAATTCTAGTTTG GCATTGCATAATAAACATTCATTTGCTGAGGATAGTGCTGGTGCGTACCCTTTGGTGCTT AGGATATCTGTTCGAGAAACAAGCATTTTGACTGTGAAGATCAGCAAAAAGGACAATCCA GTTGAGAACTATAAACGGGCATACAAGATTTTTAATATTGATTCTCAACCAGTTCATGTT TGGGATTTTTCAGGCCAGACAAACCTAATATTAATGAATGAGTGGAATAGGTCAAATCAT GACTGCTGCCACTCAGAGCTAGAGAATATTCTTGAAGTGCAAGTCTATGCAATGTCTGAC TCCTTAACTTCCAAGATTGGTGGAACCAGCAAAGAGTATACAGAACAATCTTCTGCAGAT GTTAATGATATGGATGTTGATTTGTCCTATGGAAGCTTTGGAAGATCTAGCTCGCATGGG CTAATTGGATTGGAAAATCTTGGGAATACTTGCTTTATGAACAGTTCAATTCAATGTTTG GCCCACACATCAAAGCTTGTTGATTATTTCCTAGGAGATTATGACAGGGATATAAATCGG ACTAACCCACTAGGACTGAATGGGGAACTTGCTTTGGCATTTGGAGAATTATTGAGGAGA TTATGGAACACCGAGAGAAAACCAGTTTCACCACATCACTTTAAGGCAAAGATTGCTTGT TTTGCCCCTCAGTTCAGTGGCTTCAATCAGCATGATTCACAGGAGCTTCTTGCTTTCTTA TTGGATGGCCTCCATGAAGATCTTAACCAGGTCAAGTGCAAGCCATATGAAGAAGCTAAG GATGCAAGTGGGCGCCCTGACAAAGAAGTGGCTGATGAGTACTGGAGTAATCATTTAGCT CGAAATGACTCTGTAATAGTTGATACTTACCATGGGCAGTACAAATCTACATTAACTTGC CCTACTTGCAGTAAAACATCTGTCACTTTTGACCCATTTATGTACTTGTCTTTGCCTGTA CCTTCCACGGCAAAGAGGACAATGACTGTTACAGTTTTCAGCACTGATGGTAGTATAGAG CCAATCTCATATGATGTCACTGTGCCACAATTTGGGAGTCTTAATGATCTTGTTCAGGCT TTAAGTTCTGCTTGTTCACTGGGAGATGATGAAATCCTGCTGATTACAGAGGTTTATAAC AACCGCATCCTCCGATACCTCGAAGAGCCTTCAGATTCAGTTTCATTGCTGAGGGATGGA GATAAATTGGCAGCATTCCGGCTACCAAGAAAATATGAAAAATCCCCAGTTGTGGTTTTT ACACACCAATATTTTGATGAGCGTTCTAGTATTGATAATATAACACCACAAATGAAGGAA TTTGAGGCCCCACTGCTGGCAGTTCTTCCTGAGAGAGCCAATGGATTAACTCTGAAGAAT ATCTACCTGAAGTTGTTGGAACCATTAAGATTTTCCAAGAGTACTAGTTCTCTTAATGAT AGTGGGAGGTGTAATAGTGGCTGTGCTGCTGTCATGATGGATGCAACGCCTGATTCAGAT AGTAAGTTTCAGAGTGCTCCATCGGAAAACGCCCCTGAAAGTAGCCAGTCTGAGACTATT GAATGCCAAATGACCGAAGGACCTAGTGAGTCAAATATTGGTGACACTACTGATTCTGAT CGGGAGGCACACATGGAAGAGTTTGAATTTTATTTAATAAATGGAAGGGGTGAATTCCAG CAGACGAGAATACAAACAGATGAGGTGGATTTACAGACAACACCAAACCGGCTACTTATC AATGTCCATTGGCAACAAAATGCAGTAGGACAATATGACACCTCAATGCTGAAAAGTCTA CCTGAGATTCATAAGCTTGAGCTTATCCCGAAAGGAAATGAAGATTCTGTCGCACTACAT GGTTGTCTGGAAGCCTTTCTAAAAGAGGAACCGTTGGGCCCAGAAGACATGTGGTACTGC CCATGCTGCAAAAAGCATCAACAAGCGATGAAGAAATTAGATCTGTGGAGGCTACCGGAA GTTCTTGTCATTCATCTCAAAAGGTTCTCGTACACCCAATTCACAAGAAATAAGCTTGAG ACATTTGTGGATTTCCCCATTAGTGATTTGGATCTGTCATCATATATCATTGACAAGAGT GAACTATCAGACTGCCACTATCGCTTGTATGCTATTAGCAATCACTATGGAAATATGGGA GGTGGACACTACACCGCCAGCATCTACCATGAAGAAGGGAAGGGATGGTATAAGTTTGAT GATGAGTGCGTGAGACCTATAACTGAAGACAGTATAAAGACACCTGCTGCTTATGTGCTG TTCTACAGACGAGAATGA

Peptide Sequence

PEP ID	Os07t0160000-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:3207022:3214064:1 gene:Os07g0160000 transcript:Os07t0160000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin carboxyl-terminal hydrolase. (Os07t0160000-00)
Sequence	MATAATAQASASSSTASTRGSPAASSSSHSAVCLVPFRWWARVREEAPPEGGVRYAATAA ASPSSYYGLRLLHSFLHPDLVLRLERGGCRGTGAGAGGRSYALVPADELSRVLARQNSSL ALHNKHSFAEDSAGAYPLVLRISVRETSILTVKISKKDNPVENYKRAYKIFNIDSQPVHV WDFSGQTNLILMNEWNRSNHDCCHSELENILEVQVYAMSDSLTSKIGGTSKEYTEQSSAD VNDMDVDLSYGSFGRSSSHGLIGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINR TNPLGLNGELALAFGELLRRLWNTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFL LDGLHEDLNQVKCKPYEEAKDASGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTC PTCSKTSVTFDPFMYLSLPVPSTAKRTMTVTVFSTDGSIEPISYDVTVPQFGSLNDLVQA LSSACSLGDDEILLITEVYNNRILRYLEEPSDSVSLLRDGDKLAAFRLPRKYEKSPVVVF THQYFDERSSIDNITPQMKEFEAPLLAVLPERANGLTLKNIYLKLLEPLRFSKSTSSLND SGRCNSGCAAVMMDATPDSDSKFQSAPSENAPESSQSETIECQMTEGPSESNIGDTTDSD REAHMEEFEFYLINGRGEFQQTRIQTDEVDLQTTPNRLLINVHWQQNAVGQYDTSMLKSL PEIHKLELIPKGNEDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPE VLVIHLKRFSYTQFTRNKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMG GGHYTASIYHEEGKGWYKFDDECVRPITEDSIKTPAAYVLFYRRE

Transcript Sequence

Transcript ID	Os07t0160000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:3207022:3214064:1 gene:Os07g0160000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin carboxyl-terminal hydrolase. (Os07t0160000-00)
Sequence	ACAAATCCCAGCGATCAAACGAAGCGAAGCCACAACACACAGCTCACTTCCCGCACGCAT CCTCGCCCCCCAGATCCCATCTCGCCCTCGCCTCCGGGCGATGGCCACCGCCGCCACCGC CCAGGCCTCCGCCTCCTCCTCCACCGCCTCCACCCGCGGCTCCCCCGCCGCCTCCTCCTC CTCCCACTCCGCCGTCTGCCTCGTCCCCTTCAGGTGGTGGGCGAGGGTGAGGGAGGAGGC GCCGCCGGAAGGCGGGGTGAGGTACGCGGCGACCGCGGCGGCGTCGCCCTCGTCGTACTA CGGGCTTCGCTTGCTCCACAGCTTCCTCCACCCGGATCTCGTGCTTCGCCTCGAGCGCGG GGGTTGCCGCGGCACGGGTGCCGGCGCCGGGGGGCGGAGCTACGCGCTCGTGCCGGCCGA CGAGCTCTCGCGTGTGCTCGCGAGGCAAAATTCTAGTTTGGCATTGCATAATAAACATTC ATTTGCTGAGGATAGTGCTGGTGCGTACCCTTTGGTGCTTAGGATATCTGTTCGAGAAAC AAGCATTTTGACTGTGAAGATCAGCAAAAAGGACAATCCAGTTGAGAACTATAAACGGGC ATACAAGATTTTTAATATTGATTCTCAACCAGTTCATGTTTGGGATTTTTCAGGCCAGAC AAACCTAATATTAATGAATGAGTGGAATAGGTCAAATCATGACTGCTGCCACTCAGAGCT AGAGAATATTCTTGAAGTGCAAGTCTATGCAATGTCTGACTCCTTAACTTCCAAGATTGG TGGAACCAGCAAAGAGTATACAGAACAATCTTCTGCAGATGTTAATGATATGGATGTTGA TTTGTCCTATGGAAGCTTTGGAAGATCTAGCTCGCATGGGCTAATTGGATTGGAAAATCT TGGGAATACTTGCTTTATGAACAGTTCAATTCAATGTTTGGCCCACACATCAAAGCTTGT TGATTATTTCCTAGGAGATTATGACAGGGATATAAATCGGACTAACCCACTAGGACTGAA TGGGGAACTTGCTTTGGCATTTGGAGAATTATTGAGGAGATTATGGAACACCGAGAGAAA ACCAGTTTCACCACATCACTTTAAGGCAAAGATTGCTTGTTTTGCCCCTCAGTTCAGTGG CTTCAATCAGCATGATTCACAGGAGCTTCTTGCTTTCTTATTGGATGGCCTCCATGAAGA TCTTAACCAGGTCAAGTGCAAGCCATATGAAGAAGCTAAGGATGCAAGTGGGCGCCCTGA CAAAGAAGTGGCTGATGAGTACTGGAGTAATCATTTAGCTCGAAATGACTCTGTAATAGT TGATACTTACCATGGGCAGTACAAATCTACATTAACTTGCCCTACTTGCAGTAAAACATC TGTCACTTTTGACCCATTTATGTACTTGTCTTTGCCTGTACCTTCCACGGCAAAGAGGAC AATGACTGTTACAGTTTTCAGCACTGATGGTAGTATAGAGCCAATCTCATATGATGTCAC TGTGCCACAATTTGGGAGTCTTAATGATCTTGTTCAGGCTTTAAGTTCTGCTTGTTCACT GGGAGATGATGAAATCCTGCTGATTACAGAGGTTTATAACAACCGCATCCTCCGATACCT CGAAGAGCCTTCAGATTCAGTTTCATTGCTGAGGGATGGAGATAAATTGGCAGCATTCCG GCTACCAAGAAAATATGAAAAATCCCCAGTTGTGGTTTTTACACACCAATATTTTGATGA GCGTTCTAGTATTGATAATATAACACCACAAATGAAGGAATTTGAGGCCCCACTGCTGGC AGTTCTTCCTGAGAGAGCCAATGGATTAACTCTGAAGAATATCTACCTGAAGTTGTTGGA ACCATTAAGATTTTCCAAGAGTACTAGTTCTCTTAATGATAGTGGGAGGTGTAATAGTGG CTGTGCTGCTGTCATGATGGATGCAACGCCTGATTCAGATAGTAAGTTTCAGAGTGCTCC ATCGGAAAACGCCCCTGAAAGTAGCCAGTCTGAGACTATTGAATGCCAAATGACCGAAGG ACCTAGTGAGTCAAATATTGGTGACACTACTGATTCTGATCGGGAGGCACACATGGAAGA GTTTGAATTTTATTTAATAAATGGAAGGGGTGAATTCCAGCAGACGAGAATACAAACAGA TGAGGTGGATTTACAGACAACACCAAACCGGCTACTTATCAATGTCCATTGGCAACAAAA TGCAGTAGGACAATATGACACCTCAATGCTGAAAAGTCTACCTGAGATTCATAAGCTTGA GCTTATCCCGAAAGGAAATGAAGATTCTGTCGCACTACATGGTTGTCTGGAAGCCTTTCT AAAAGAGGAACCGTTGGGCCCAGAAGACATGTGGTACTGCCCATGCTGCAAAAAGCATCA ACAAGCGATGAAGAAATTAGATCTGTGGAGGCTACCGGAAGTTCTTGTCATTCATCTCAA AAGGTTCTCGTACACCCAATTCACAAGAAATAAGCTTGAGACATTTGTGGATTTCCCCAT TAGTGATTTGGATCTGTCATCATATATCATTGACAAGAGTGAACTATCAGACTGCCACTA TCGCTTGTATGCTATTAGCAATCACTATGGAAATATGGGAGGTGGACACTACACCGCCAG CATCTACCATGAAGAAGGGAAGGGATGGTATAAGTTTGATGATGAGTGCGTGAGACCTAT AACTGAAGACAGTATAAAGACACCTGCTGCTTATGTGCTGTTCTACAGACGAGAATGATC AAGATACAGCTGCAATACATCAAATATTTTTTCGGGATGTTTTGCCAAGTCTAGATCTTC CTACATATTCAACATATGGGGCACTTGAATCTCTCAAGTCACTAACCTATACAATAGCAT GTACAGATTCAATTGCCGACAGGAGAACAAAAGACCTAGCTAATGAACTATTCTTTTCCA GATTCTTTTTGTACATGGCTTGGGGGTCCTACAATGTAATTGCCTGCTAGTGATTAGCCT GGGTTCTACAAAATTCTTTTTGTCACCGAATTGTTGCCAATAATTTTTAAAACGATGTAA CCTCTCCTTTTTAATTAACTCGTGTGATCGATCTGTTCCTGTCGCGAGTGCGACGCCATA GCTACTCC