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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0159800-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:3199137:3201809:1 gene:Os07g0159800 gene_biotype:protein_coding transcript_biotype:protein_coding description:MD-2-related lipid-recognition domain containing protein. (Os07t0159800-01);Similar to ML domain protein. (Os07t0159800-02)
Sequence

GATCCGGTCGCCCGCGGCGAGCCCGCAACCTTCAAGATCTCCGCTTCCACTGATAAAACT
ATCGGTAAAGGGAAGCTGGTTATTGATGTGAAATACTTCTTCTTCTATGTCCACTCGGAA
ACTCGTGAGCTCTGTGATGTGACTTCCTGCCCGGCAAGTGGTGACTTCTTGGTAGCTCAT
CAGCAAACCCTGCCATCATACACTCCACCAGGCTCTTACACCATCACCATGAAGATGCTG
GGTGATAACGATGAGGAGCTGAGCTGCATCTCGTTCGGGTTCAGCATCGGTTTCGCTGCA
TCAGAAGCCACCATCTGA

Peptide Sequence

PEP ID

Os07t0159800-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:3199137:3201809:1 gene:Os07g0159800 transcript:Os07t0159800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:MD-2-related lipid-recognition domain containing protein. (Os07t0159800-01);Similar to ML domain protein. (Os07t0159800-02)
Sequence

DPVARGEPATFKISASTDKTIGKGKLVIDVKYFFFYVHSETRELCDVTSCPASGDFLVAH
QQTLPSYTPPGSYTITMKMLGDNDEELSCISFGFSIGFAASEATI

Transcript Sequence

Transcript ID

Os07t0159800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:3199137:3201809:1 gene:Os07g0159800 gene_biotype:protein_coding transcript_biotype:protein_coding description:MD-2-related lipid-recognition domain containing protein. (Os07t0159800-01);Similar to ML domain protein. (Os07t0159800-02)
Sequence

CCGATCCGGTCGCCCGCGGCGAGCCCGCAACCTTCAAGATCTCCGCTTCCACTGATAAAA
CTATCGGTAAAGGGAAGCTGGTTATTGATGTGAAATACTTCTTCTTCTATGTCCACTCGG
AAACTCGTGAGCTCTGTGATGTGACTTCCTGCCCGGCAAGTGGTGACTTCTTGGTAGCTC
ATCAGCAAACCCTGCCATCATACACTCCACCAGGCTCTTACACCATCACCATGAAGATGC
TGGGTGATAACGATGAGGAGCTGAGCTGCATCTCGTTCGGGTTCAGCATCGGTTTCGCTG
CATCAGAAGCCACCATCTGAATGCATCCAGAGGCAGAATTCAGAAATATCACACCATGGA
TGTAATTACAAAAGCACCTATGTATCTTAGATCATAGAACTCAAATACAATGCGCATCTG
CCAACACATTGTGTTCAACTAAGACGTTTTATCCAGAGTTGAACATACAATAAAAACATC
ACTCACTAGTGTACCTAACTCCGTTTAGCTGTTGAAATGTGTTGCATTGCATGTTGAATT
GAGCCTGGATGCATCTTGATCTTGAG