Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0158900-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:3153597:3155859:-1 gene:Os07g0158900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 341 description:Cyclin-like F-box domain containing protein. (Os07t0158900-01);Hypothetical conserved gene. (Os07t0158900-02)
Sequence	GGTGCTATGGACAGTTCATATTTGCTGTCCATGAGGCTTAGTGCTGTTTCTCTGAACCCG CCTGTGGATTTCAAAGCCTTTCTGAACCTTAAAAGGCTCAAGTTAGAACACACAAATATT ACTGATGAAAACATGCAGATTTTGATCTCCAACTGCAATGCCTTGGAGTTTCTTGGTATC GTTGATTGTGGGAAGCTCACAAGATTGTCGACATCGCACCTTTGGAACCAGCTTAAACAT TTGCATGTCGAGAGCTGCCATCTGCTTAAAGAGATAGAGTTGAATCTTGGCCTGACGAAA CTTGGGTACAAGGGCACACTGATACCGTTGTCACCTCCTGGGCCATTGCTGCTAACGAAT GTCTGCATGAAGCTGCAACACGCTCGTTCCTCTCTTGGATATATCTTCACCAATCTTCCA AGCACGCTGCTCCATCTCGAGACGCTGAGTTTGCAATGTTCAGAACTCGAGAGGGCTATT TTGCCAGAAAATCATATCAAATTTATGTATCTAAAGCATTTGAGGTTGCAATTGAGACAC CCTGTGACGGAAAAGAAGATTGATCTTCTTGACTTTGCCTGCCTACTGGAAGCTGCTCCT TTACTGCAAAAGTTTGAATTACATATGTGGATGCCCCTTCACCATCAACGGTATCGCGAA GAAGCTCATGGCGAGCTACGGAGTCTTCCACCGCAGCCTCATGCCCATCTCAGGCTTGTA CACATAAGTGGATTCATCGGCATGAAAGACCAATTGGAGCTGTCACTGCACATTCTCAGA AATTCCGCCATGATCAGGGCGATGAAGGTCGACCCCAAGCCGCTCTTCGCCCTTCCTTGT ATATCGATGCTGTCACCCTTGGAAGGGTTTCAGTATCTTGATGGGTATGAGGTCGCCATT GAATATCTCTGCAGAGAAGACCACAACAATGTTGTCGATGTTTCTGAAATTCGTCGCGAG GAGGTCGAAACGCTCTCGGTTTGTGAGCTGGTTTATCCAGATTGTGTTCGCCTTACCCGT AAGGCCAATTCCTCTTCCTGA

Peptide Sequence

PEP ID	Os07t0158900-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:3153597:3155859:-1 gene:Os07g0158900 transcript:Os07t0158900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 341 description:Cyclin-like F-box domain containing protein. (Os07t0158900-01);Hypothetical conserved gene. (Os07t0158900-02)
Sequence	GAMDSSYLLSMRLSAVSLNPPVDFKAFLNLKRLKLEHTNITDENMQILISNCNALEFLGI VDCGKLTRLSTSHLWNQLKHLHVESCHLLKEIELNLGLTKLGYKGTLIPLSPPGPLLLTN VCMKLQHARSSLGYIFTNLPSTLLHLETLSLQCSELERAILPENHIKFMYLKHLRLQLRH PVTEKKIDLLDFACLLEAAPLLQKFELHMWMPLHHQRYREEAHGELRSLPPQPHAHLRLV HISGFIGMKDQLELSLHILRNSAMIRAMKVDPKPLFALPCISMLSPLEGFQYLDGYEVAI EYLCREDHNNVVDVSEIRREEVETLSVCELVYPDCVRLTRKANSSS

Transcript Sequence

Transcript ID	Os07t0158900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:3153597:3155859:-1 gene:Os07g0158900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 341 description:Cyclin-like F-box domain containing protein. (Os07t0158900-01);Hypothetical conserved gene. (Os07t0158900-02)
Sequence	GGTGCTATGGACAGTTCATATTTGCTGTCCATGAGGCTTAGTGCTGTTTCTCTGAACCCG CCTGTGGATTTCAAAGCCTTTCTGAACCTTAAAAGGCTCAAGTTAGAACACACAAATATT ACTGATGAAAACATGCAGATTTTGATCTCCAACTGCAATGCCTTGGAGTTTCTTGGTATC GTTGATTGTGGGAAGCTCACAAGATTGTCGACATCGCACCTTTGGAACCAGCTTAAACAT TTGCATGTCGAGAGCTGCCATCTGCTTAAAGAGATAGAGTTGAATCTTGGCCTGACGAAA CTTGGGTACAAGGGCACACTGATACCGTTGTCACCTCCTGGGCCATTGCTGCTAACGAAT GTCTGCATGAAGCTGCAACACGCTCGTTCCTCTCTTGGATATATCTTCACCAATCTTCCA AGCACGCTGCTCCATCTCGAGACGCTGAGTTTGCAATGTTCAGAACTCGAGAGGGCTATT TTGCCAGAAAATCATATCAAATTTATGTATCTAAAGCATTTGAGGTTGCAATTGAGACAC CCTGTGACGGAAAAGAAGATTGATCTTCTTGACTTTGCCTGCCTACTGGAAGCTGCTCCT TTACTGCAAAAGTTTGAATTACATATGTGGATGCCCCTTCACCATCAACGGTATCGCGAA GAAGCTCATGGCGAGCTACGGAGTCTTCCACCGCAGCCTCATGCCCATCTCAGGCTTGTA CACATAAGTGGATTCATCGGCATGAAAGACCAATTGGAGCTGTCACTGCACATTCTCAGA AATTCCGCCATGATCAGGGCGATGAAGGTCGACCCCAAGCCGCTCTTCGCCCTTCCTTGT ATATCGATGCTGTCACCCTTGGAAGGGTTTCAGTATCTTGATGGGTATGAGGTCGCCATT GAATATCTCTGCAGAGAAGACCACAACAATGTTGTCGATGTTTCTGAAATTCGTCGCGAG GAGGTCGAAACGCTCTCGGTTTGTGAGCTGGTTTATCCAGATTGTGTTCGCCTTACCCGT AAGGCCAATTCCTCTTCCTGATTAAGATTTGAGCCACTCTGAAGGTATTGTTCATGCCAG TCAAGCTCTACACAATTTGGACGACTTTGGAGTTTGGAGCAGCTAAGTCAGCCCTGATTA GTTTGGTTTTGGTTTTTGGACAACTTAGGATTGTGAATTTGAAGAACAACTCGTATGTGT TTTAGTTCCTTGACGGTAACTTATTTAACTTCCTTTTCTGTATGATGGTTGCTTCAGAAA ATTTCATCACTGGAAAGTGTTTTTGTGATTGGAAATGGTGGTCGTTCAGGTTAACGTCCT GGTTTTTTCAGTTCAGACTTCAGAATGATTTTCTTCCTGGAGCTGCTTAATGCATCATTT ATAAG