Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0152200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:2757336:2761925:-1 gene:Os07g0152200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0152200-01)
Sequence	ATGGCGGCATCCGTGGCGAGGGTGTTGCTCGCGGCGGCGGTCTTCTTTGCCGCTGTCGCT GCCGCCGCCGCGGCGTCGTCGTCGGCGGCGGCGGTGGCGGCGTTGATGGAGTTCAAGACC AAGCTGGACGACGTGGACGGGCGCCTCTCGAGCTGGGACGCGGCGGGCGGCAGCGGCGGC GGCGACCCGTGCGGGTGGCCCGGCATTGCCTGCTCCGCCGCGATGGAGGTCACCGCGGTG ACGCTCCACGGCCTCAACCTCCACGGCGAGCTCTCCGCCGCCGTGTGCGCGCTCCCGCGC CTCGCCGTCCTCAACGTGTCCAAGAACGCGCTCGCCGGCGCGCTCCCGCCCGGCCTCGCC GCGTGCCGCGCCCTCGAGGTGCTCGACCTCAGCACCAACTCCCTCCACGGCGGCATCCCG CCGTCGCTCTGCTCCCTCCCGTCCCTCCGCCAGCTGTTCCTCAGCGAGAACTTCCTGTCC GGCGAGATCCCGGCGGCCATCGGCAACCTCACCGCCCTCGAGGAGCTCGAAATCTACAGC AACAACCTCACCGGCGGGATCCCGACCACCATCGCGGCGCTCCAGCGCCTCCGCATCATC CGCGCAGGGCTCAACGACCTCTCCGGCCCGATCCCCGTCGAGATCAGCGCGTGCGCCAGC CTCGCCGTGCTCGGCCTCGCCCAGAACAACCTCGCCGGCGAGCTCCCCGGCGAGCTCTCC CGCCTCAAGAACCTCACCACATTGATCCTCTGGCAGAACGCCCTCTCCGGCGAGATCCCG CCGGAGCTCGGCGACATCCCCAGCCTCGAGATGCTCGCCCTCAACGACAACGCCTTCACC GGCGGCGTCCCCAGGGAGCTCGGCGCGCTGCCATCCCTCGCCAAGCTCTACATTTACCGG AACCAGCTCGACGGCACCATCCCAAGGGAGCTCGGCGACCTCCAGAGCGCCGTCGAGATC GACCTCTCGGAGAACAAGCTCACCGGCGTCATCCCCGGCGAGCTCGGCCGGATTCCGACG CTCCGGCTGCTCTACCTCTTCGAGAACAGGTTGCAAGGAAGCATCCCACCGGAGCTCGGC GAGCTCACCGTCATCAGGAGGATTGATCTGTCCATCAACAACCTCACCGGCACAATTCCA ATGGAGTTTCAGAACCTCACCGATTTGGAGTACCTGCAGCTGTTCGACAACCAAATCCAT GGTGTCATCCCTCCTATGCTTGGTGCAGGCAGCAACCTTTCGGTGCTCGATTTGTCGGAT AATCGGCTGACGGGGAGCATCCCACCTCACCTTTGCAAGTTCCAGAAGCTCATCTTCTTG AGCCTCGGATCGAACCGCCTCATCGGCAACATCCCCCCGGGCGTGAAGGCTTGTAGGACA TTGACACAGCTCCAATTGGGGGGGAACATGCTCACCGGGAGCCTCCCCGTCGAGCTTTCG CTGCTGCGGAACCTGTCGTCGCTTGACATGAACCGGAACCGGTTCTCGGGACCGATACCA CCCGAGATCGGCAAGTTCAGGAGCATAGAGAGGCTGATTTTGTCGGAGAATTACTTTGTT GGGCAGATCCCTCCTGGCATTGGCAACCTCACCAAGCTTGTCGCCTTCAATATATCGTCG AACCAGCTCACCGGACCGATTCCTCGGGAGCTGGCGCGGTGTACAAAGCTCCAGAGGCTT GATCTGAGTAAGAACTCCCTCACTGGAGTCATTCCTCAGGAGCTTGGCACACTGGTGAAC CTGGAGCAACTGAAGCTATCTGACAATAGTCTGAATGGAACCGTACCAAGCAGTTTCGGA GGCCTTTCCCGGCTCACCGAGCTGCAGATGGGAGGCAACCGCTTGTCCGGCCAATTGCCG GTCGAGCTTGGCCAGCTCACTGCGCTCCAGATTGCGCTGAATGTCAGTTACAACATGCTA TCTGGTGAGATCCCGACTCAACTAGGAAACTTGCACATGCTGGAGTTCCTTTACTTGAAC AACAATGAGCTAGAAGGTGAAGTCCCTTCCTCATTCGGAGAGCTCTCGAGTCTGCTGGAG TGCAACCTTTCTTACAACAATCTTGCCGGGCCGCTTCCCAGCACCACGCTGTTCCAGCAC ATGGACAGCAGCAATTTCCTGGGAAACAATGGCCTTTGTGGTATCAAAGGGAAATCATGT TCAGGATTATCAGGGTCAGCCTATGCAAGCAGGGAAGCAGCGGTGCAGAAGAAGCGGCTT CTCAGGGAGAAGATCATCAGCATTTCCTCCATTGTTATCGCGTTTGTCTCATTGGTGTTG ATCGCAGTCGTTTGCTGGTCCTTGAAATCCAAGATACCTGATCTTGTATCGAACGAAGAG CGCAAGACTGGGTTTTCAGGTCCTCACTACTTCCTGAAGGAACGGATAACCTTTCAGGAG CTTATGAAGGTGACCGACAGCTTCTCAGAGAGTGCCGTAATTGGAAGGGGTGCTTGTGGC ACTGTCTATAAGGCTATCATGCCTGATGGGAGAAGGGTTGCAGTGAAGAAGCTGAAGTGC CAGGGAGAAGGTTCCAATGTCGATAGAAGCTTTCGAGCTGAGATAACCACACTCGGAAAT GTCAGGCACCGGAACATTGTCAAGCTGTATGGTTTCTGCTCCAATCAGGACTGCAATCTT ATCCTGTATGAGTACATGGCAAATGGTAGCCTTGGAGAGTTGCTTCATGGTAGCAAGGAT GTGTGTCTACTGGACTGGGACACCCGTTATCGGATCGCTCTCGGGGCTGCGGAAGGTCTG AGGTATCTTCACAGTGACTGCAAACCGAAGGTGATTCACCGTGACATAAAATCGAACAAC ATATTGCTTGATGAAATGATGGAGGCTCATGTAGGGGACTTTGGCTTGGCAAAACTGATT GATATTTCCAACTCCAGAACAATGTCTGCTATTGCCGGTTCATATGGCTACATTGCACCA GAGTATGCTTTTACCATGAAGGTGACTGAAAAATGTGACATTTATAGCTTCGGGGTAGTC TTGTTGGAGCTAGTGACGGGACAATCTCCGATTCAACCTCTTGAGCAAGGAGGGGATCTT GTCAATCTAGTGAGGCGGATGACAAACAGTTCGACAACAAATTCTGAAATTTTTGACAGC AGGCTGAATCTGAACTCAAGGAGGGTTCTGGAAGAAATTTCACTGGTTCTGAAGATTGCA TTGTTCTGCACCAGCGAGTCGCCACTAGATAGGCCTAGCATGCGTGAAGTAATATCAATG CTGATGGATGCCAGAGCCTCTGCTTATGATTCTTTTTCGTCTCCAGCATCGGAGGCGCCT ATAGAAGATGATTCTTCTCTTAAACATTAG

Peptide Sequence

PEP ID	Os07t0152200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:2757336:2761925:-1 gene:Os07g0152200 transcript:Os07t0152200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0152200-01)
Sequence	MAASVARVLLAAAVFFAAVAAAAAASSSAAAVAALMEFKTKLDDVDGRLSSWDAAGGSGG GDPCGWPGIACSAAMEVTAVTLHGLNLHGELSAAVCALPRLAVLNVSKNALAGALPPGLA ACRALEVLDLSTNSLHGGIPPSLCSLPSLRQLFLSENFLSGEIPAAIGNLTALEELEIYS NNLTGGIPTTIAALQRLRIIRAGLNDLSGPIPVEISACASLAVLGLAQNNLAGELPGELS RLKNLTTLILWQNALSGEIPPELGDIPSLEMLALNDNAFTGGVPRELGALPSLAKLYIYR NQLDGTIPRELGDLQSAVEIDLSENKLTGVIPGELGRIPTLRLLYLFENRLQGSIPPELG ELTVIRRIDLSINNLTGTIPMEFQNLTDLEYLQLFDNQIHGVIPPMLGAGSNLSVLDLSD NRLTGSIPPHLCKFQKLIFLSLGSNRLIGNIPPGVKACRTLTQLQLGGNMLTGSLPVELS LLRNLSSLDMNRNRFSGPIPPEIGKFRSIERLILSENYFVGQIPPGIGNLTKLVAFNISS NQLTGPIPRELARCTKLQRLDLSKNSLTGVIPQELGTLVNLEQLKLSDNSLNGTVPSSFG GLSRLTELQMGGNRLSGQLPVELGQLTALQIALNVSYNMLSGEIPTQLGNLHMLEFLYLN NNELEGEVPSSFGELSSLLECNLSYNNLAGPLPSTTLFQHMDSSNFLGNNGLCGIKGKSC SGLSGSAYASREAAVQKKRLLREKIISISSIVIAFVSLVLIAVVCWSLKSKIPDLVSNEE RKTGFSGPHYFLKERITFQELMKVTDSFSESAVIGRGACGTVYKAIMPDGRRVAVKKLKC QGEGSNVDRSFRAEITTLGNVRHRNIVKLYGFCSNQDCNLILYEYMANGSLGELLHGSKD VCLLDWDTRYRIALGAAEGLRYLHSDCKPKVIHRDIKSNNILLDEMMEAHVGDFGLAKLI DISNSRTMSAIAGSYGYIAPEYAFTMKVTEKCDIYSFGVVLLELVTGQSPIQPLEQGGDL VNLVRRMTNSSTTNSEIFDSRLNLNSRRVLEEISLVLKIALFCTSESPLDRPSMREVISM LMDARASAYDSFSSPASEAPIEDDSSLKH

Transcript Sequence

Transcript ID	Os07t0152200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:2757336:2761925:-1 gene:Os07g0152200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os07t0152200-01)
Sequence	CTCTCTCTCTCCCCTGCAGCGCCCACTCACTTCAGTCGCCGCCACCACCACCACCATCGT GTTGTGCATCCCGATTGCGCGGGCGACTAGTGCCACCACCCATGGCTGGGTGAGACTGTC CCCGCTTGCTGGGTGGTGGTGGCCTAGTGGGGTTGGGGGGGTGGGGGCGCTCGCCTTCTT GGCTGCTGCTCTCTGTGCGTGTGCGTCCATCCATGGCGCGCTGTTTCTTGGCGTAGAGGC GGTGCGCGTGTTTTGCTCGTTTTTCGTTCGAGGTTGAGCTCGGTTGTTGCGGCAATGGCG GCATCCGTGGCGAGGGTGTTGCTCGCGGCGGCGGTCTTCTTTGCCGCTGTCGCTGCCGCC GCCGCGGCGTCGTCGTCGGCGGCGGCGGTGGCGGCGTTGATGGAGTTCAAGACCAAGCTG GACGACGTGGACGGGCGCCTCTCGAGCTGGGACGCGGCGGGCGGCAGCGGCGGCGGCGAC CCGTGCGGGTGGCCCGGCATTGCCTGCTCCGCCGCGATGGAGGTCACCGCGGTGACGCTC CACGGCCTCAACCTCCACGGCGAGCTCTCCGCCGCCGTGTGCGCGCTCCCGCGCCTCGCC GTCCTCAACGTGTCCAAGAACGCGCTCGCCGGCGCGCTCCCGCCCGGCCTCGCCGCGTGC CGCGCCCTCGAGGTGCTCGACCTCAGCACCAACTCCCTCCACGGCGGCATCCCGCCGTCG CTCTGCTCCCTCCCGTCCCTCCGCCAGCTGTTCCTCAGCGAGAACTTCCTGTCCGGCGAG ATCCCGGCGGCCATCGGCAACCTCACCGCCCTCGAGGAGCTCGAAATCTACAGCAACAAC CTCACCGGCGGGATCCCGACCACCATCGCGGCGCTCCAGCGCCTCCGCATCATCCGCGCA GGGCTCAACGACCTCTCCGGCCCGATCCCCGTCGAGATCAGCGCGTGCGCCAGCCTCGCC GTGCTCGGCCTCGCCCAGAACAACCTCGCCGGCGAGCTCCCCGGCGAGCTCTCCCGCCTC AAGAACCTCACCACATTGATCCTCTGGCAGAACGCCCTCTCCGGCGAGATCCCGCCGGAG CTCGGCGACATCCCCAGCCTCGAGATGCTCGCCCTCAACGACAACGCCTTCACCGGCGGC GTCCCCAGGGAGCTCGGCGCGCTGCCATCCCTCGCCAAGCTCTACATTTACCGGAACCAG CTCGACGGCACCATCCCAAGGGAGCTCGGCGACCTCCAGAGCGCCGTCGAGATCGACCTC TCGGAGAACAAGCTCACCGGCGTCATCCCCGGCGAGCTCGGCCGGATTCCGACGCTCCGG CTGCTCTACCTCTTCGAGAACAGGTTGCAAGGAAGCATCCCACCGGAGCTCGGCGAGCTC ACCGTCATCAGGAGGATTGATCTGTCCATCAACAACCTCACCGGCACAATTCCAATGGAG TTTCAGAACCTCACCGATTTGGAGTACCTGCAGCTGTTCGACAACCAAATCCATGGTGTC ATCCCTCCTATGCTTGGTGCAGGCAGCAACCTTTCGGTGCTCGATTTGTCGGATAATCGG CTGACGGGGAGCATCCCACCTCACCTTTGCAAGTTCCAGAAGCTCATCTTCTTGAGCCTC GGATCGAACCGCCTCATCGGCAACATCCCCCCGGGCGTGAAGGCTTGTAGGACATTGACA CAGCTCCAATTGGGGGGGAACATGCTCACCGGGAGCCTCCCCGTCGAGCTTTCGCTGCTG CGGAACCTGTCGTCGCTTGACATGAACCGGAACCGGTTCTCGGGACCGATACCACCCGAG ATCGGCAAGTTCAGGAGCATAGAGAGGCTGATTTTGTCGGAGAATTACTTTGTTGGGCAG ATCCCTCCTGGCATTGGCAACCTCACCAAGCTTGTCGCCTTCAATATATCGTCGAACCAG CTCACCGGACCGATTCCTCGGGAGCTGGCGCGGTGTACAAAGCTCCAGAGGCTTGATCTG AGTAAGAACTCCCTCACTGGAGTCATTCCTCAGGAGCTTGGCACACTGGTGAACCTGGAG CAACTGAAGCTATCTGACAATAGTCTGAATGGAACCGTACCAAGCAGTTTCGGAGGCCTT TCCCGGCTCACCGAGCTGCAGATGGGAGGCAACCGCTTGTCCGGCCAATTGCCGGTCGAG CTTGGCCAGCTCACTGCGCTCCAGATTGCGCTGAATGTCAGTTACAACATGCTATCTGGT GAGATCCCGACTCAACTAGGAAACTTGCACATGCTGGAGTTCCTTTACTTGAACAACAAT GAGCTAGAAGGTGAAGTCCCTTCCTCATTCGGAGAGCTCTCGAGTCTGCTGGAGTGCAAC CTTTCTTACAACAATCTTGCCGGGCCGCTTCCCAGCACCACGCTGTTCCAGCACATGGAC AGCAGCAATTTCCTGGGAAACAATGGCCTTTGTGGTATCAAAGGGAAATCATGTTCAGGA TTATCAGGGTCAGCCTATGCAAGCAGGGAAGCAGCGGTGCAGAAGAAGCGGCTTCTCAGG GAGAAGATCATCAGCATTTCCTCCATTGTTATCGCGTTTGTCTCATTGGTGTTGATCGCA GTCGTTTGCTGGTCCTTGAAATCCAAGATACCTGATCTTGTATCGAACGAAGAGCGCAAG ACTGGGTTTTCAGGTCCTCACTACTTCCTGAAGGAACGGATAACCTTTCAGGAGCTTATG AAGGTGACCGACAGCTTCTCAGAGAGTGCCGTAATTGGAAGGGGTGCTTGTGGCACTGTC TATAAGGCTATCATGCCTGATGGGAGAAGGGTTGCAGTGAAGAAGCTGAAGTGCCAGGGA GAAGGTTCCAATGTCGATAGAAGCTTTCGAGCTGAGATAACCACACTCGGAAATGTCAGG CACCGGAACATTGTCAAGCTGTATGGTTTCTGCTCCAATCAGGACTGCAATCTTATCCTG TATGAGTACATGGCAAATGGTAGCCTTGGAGAGTTGCTTCATGGTAGCAAGGATGTGTGT CTACTGGACTGGGACACCCGTTATCGGATCGCTCTCGGGGCTGCGGAAGGTCTGAGGTAT CTTCACAGTGACTGCAAACCGAAGGTGATTCACCGTGACATAAAATCGAACAACATATTG CTTGATGAAATGATGGAGGCTCATGTAGGGGACTTTGGCTTGGCAAAACTGATTGATATT TCCAACTCCAGAACAATGTCTGCTATTGCCGGTTCATATGGCTACATTGCACCAGAGTAT GCTTTTACCATGAAGGTGACTGAAAAATGTGACATTTATAGCTTCGGGGTAGTCTTGTTG GAGCTAGTGACGGGACAATCTCCGATTCAACCTCTTGAGCAAGGAGGGGATCTTGTCAAT CTAGTGAGGCGGATGACAAACAGTTCGACAACAAATTCTGAAATTTTTGACAGCAGGCTG AATCTGAACTCAAGGAGGGTTCTGGAAGAAATTTCACTGGTTCTGAAGATTGCATTGTTC TGCACCAGCGAGTCGCCACTAGATAGGCCTAGCATGCGTGAAGTAATATCAATGCTGATG GATGCCAGAGCCTCTGCTTATGATTCTTTTTCGTCTCCAGCATCGGAGGCGCCTATAGAA GATGATTCTTCTCTTAAACATTAGAGGTGAGATGAGAATTATTGAATAAGCAGCCTGTCA TTGATCTTGCCTATGATTTATTTTCATTCTATAGTTAACGATAGTATCAGGTAGCGGCTA CATTGTTTTAGCGCAAAATACAATTATACTATTATTTTTTTCAGTTCCAACAGATCAACC TTGTCAAGTAATTGGTTGTGCATGAAACTGAAACATTACTACAGAAAAATTGCATATTGT CAGTCCATAGGCTCATAGGACGTCTTGTAAGAGCTACAAAATATATGCATCATCACCAAG TTTTCAGCCACTTATACCAGAAATAATTTTCGGCGCATTAATTTACTACCAGTTGGACAA CATTATATGCTAACCAGTTGCTTGTTTTCTTGTTTGGCAGGCTAGTGTCTTCAATTCTTT TTTACCAGCTGAGTATAAACTAGCAAGGGAGCATCCACAACTTAACTGAGATCTTAGTTG AGGAACCTCTAGGTTATGTGTTATTGTTGTGCTCCAAGAAGCTGTGGATATAATCTAACC TCAGTTTGAACAAGAAATCTGTCGTTCTGACCAAGATTAACCATCGGTTAAAGGATCTGA AGTAGTCCAGTTAACTTCAGTGACTACCCTGCAGTGGAGGAAGATATTTCAGAGTTTGGA GTGTTCCCTTTATGAAACACTCCAAATAGGCAGAGATAGGTTCAGTTCATCAGTCCACAA AGATCTACTTTACTACCCTGATAAAGTTCAGTAGCAACACACTGCATTGTACATACTTAA ACAGTATATATATTGAGCTCATAATAAATATAACAAATTAATC