Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0152000-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:2751213:2756586:1 gene:Os07g0152000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 21 description:Transcription factor , Cold tolerance (Os07t0152000-01)
Sequence	ATGGAGCTCGCCGGCAGCAACAACAAGCGGGGGAGGGTGAGGGGGCCCAACGACGACGAC GACGACGCCGGGGAGCCGGACGCCAAGCGCCATCACCACCAGCTGCTGTTGCCGTGGCCG CAGCAGCAGCAGCAGCAGCATCCGGCGTCGCGGATCTACCGGGTGTCGCGGGCCTCCGGC GGGAAGGACCGCCACAGCAAGGTGTACACGGCCAAGGGCATCCGCGACCGCCGCGTCCGC CTCTCCGTCTCCACCGCCATCCAGTTCTACGACCTCCAGGATCGTCTCGGGTATGACCAG CCGAGCAAGGCCATCGAGTGGCTCATTAAGGCCGCCGCCGCCGCCATCGACAAGCTCCCT TCGCTTGATACCGCTTCCTTCCCCACCAACCCCGCCTCCTCCGCCGCTGTTGCTGCTGCT GCTGCTCCTCCTCTTCCCCATGCCGAACGCGAGCAGCAGCAGCAGCTCACCAAGTCCGGA TGCAGTAGCACGTCGGAGACCAGCAAGGGCTCCGTCCTCTCCCTCTCCCGCTCCGAGAGC CGCGTCAAGGCCAGGGAGCGCGCCAGGGAGCGGAGCAGCGCGGCCGCCGCCGCGGCATCC AAGGACGCCGGGGACGACGCCGCCACCCCCACCGCGCCCACCGCCGCGCCCGCCTCCTCG CAGGCGGCTTCCTTCACCGAGCTACTCACCGGGATGGCCGCAGCCAACGCCTCACCCGCT GACCACAAGCAGCAGCAGGCGTGGCAGCCGATGACCGTCGCCGCGGCCACCGCCGACTAC ATCGGCTTCGCCGCCGCCGCCGCGCCGCATACGCAGCCGCGGAAATCCGCCGCGGGCCAT CACTCCGCGATGCCGCACACCTTCGCATCACCCGCTCCCCACCTCGCCAACATCACCCCC ATCGCCATGGCGCCCGCGCAGCACTTCACCCTCACACCCGCCGCCGCCGAGCACCACGCG GAGATGACGCACTACTCGTTCGACCACTTCATGCCCGTCCACGCGGCAGCAGCGGCGGCG GCGGCGGCCTCCACCCCGGCCGGCGGCGACTACAACCTCAACTTCTCCATGTCCTCGGGT CTTGTGGGTGTCCACAGTAGGGGGACCCTTCAGTCCAATTCGCAGTCTCACCTCTCCAGC CATCACCACCACCATCACCAGCAACAGCAGCAGCAGCAGCAGCTGCAGAGGCTGTCTGCT CCGCTGGATGCGCCCAACATTCCGTTCCTCTTCAGCCCGGCCGCCGCGCCCACCGCCGCG GACACCCAGTTCGCCGCCGCATTGCAGCTCTGGGACGGGTTCCGGCACGCCGACATCAAG GAGAAGGGCAAGCACTGA

Peptide Sequence

PEP ID	Os07t0152000-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:2751213:2756586:1 gene:Os07g0152000 transcript:Os07t0152000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 21 description:Transcription factor , Cold tolerance (Os07t0152000-01)
Sequence	MELAGSNNKRGRVRGPNDDDDDAGEPDAKRHHHQLLLPWPQQQQQQHPASRIYRVSRASG GKDRHSKVYTAKGIRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAIEWLIKAAAAAIDKLP SLDTASFPTNPASSAAVAAAAAPPLPHAEREQQQQLTKSGCSSTSETSKGSVLSLSRSES RVKARERARERSSAAAAAASKDAGDDAATPTAPTAAPASSQAASFTELLTGMAAANASPA DHKQQQAWQPMTVAAATADYIGFAAAAAPHTQPRKSAAGHHSAMPHTFASPAPHLANITP IAMAPAQHFTLTPAAAEHHAEMTHYSFDHFMPVHAAAAAAAAASTPAGGDYNLNFSMSSG LVGVHSRGTLQSNSQSHLSSHHHHHHQQQQQQQQLQRLSAPLDAPNIPFLFSPAAAPTAA DTQFAAALQLWDGFRHADIKEKGKH

Transcript Sequence

Transcript ID	Os07t0152000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:2751213:2756586:1 gene:Os07g0152000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 21 description:Transcription factor , Cold tolerance (Os07t0152000-01)
Sequence	ATTTCAATTTTCCTTTTCCCCTCATAAAATCACTCTCCCTCTTCTCTCTTCCTCTTCTCC CCCCAAAAACCTCGCCTCCGCCCGATCGCCTCGCCGCCTTAACCCCCACCCCCGATCTCC TTCCTCACCGACGACGCGCGCCCCACTCCCCCCACCTCAATGCGCGCTTCCTAGGGCATA TGACCGGTACTACGACAACCATCACCTCTCGCCGTCACCGTCATCGTCGGGATGGAGCTC GCCGGCAGCAACAACAAGCGGGGGAGGGTGAGGGGGCCCAACGACGACGACGACGACGCC GGGGAGCCGGACGCCAAGCGCCATCACCACCAGCTGCTGTTGCCGTGGCCGCAGCAGCAG CAGCAGCAGCATCCGGCGTCGCGGATCTACCGGGTGTCGCGGGCCTCCGGCGGGAAGGAC CGCCACAGCAAGGTGTACACGGCCAAGGGCATCCGCGACCGCCGCGTCCGCCTCTCCGTC TCCACCGCCATCCAGTTCTACGACCTCCAGGATCGTCTCGGGTATGACCAGCCGAGCAAG GCCATCGAGTGGCTCATTAAGGCCGCCGCCGCCGCCATCGACAAGCTCCCTTCGCTTGAT ACCGCTTCCTTCCCCACCAACCCCGCCTCCTCCGCCGCTGTTGCTGCTGCTGCTGCTCCT CCTCTTCCCCATGCCGAACGCGAGCAGCAGCAGCAGCTCACCAAGTCCGGATGCAGTAGC ACGTCGGAGACCAGCAAGGGCTCCGTCCTCTCCCTCTCCCGCTCCGAGAGCCGCGTCAAG GCCAGGGAGCGCGCCAGGGAGCGGAGCAGCGCGGCCGCCGCCGCGGCATCCAAGGACGCC GGGGACGACGCCGCCACCCCCACCGCGCCCACCGCCGCGCCCGCCTCCTCGCAGGCGGCT TCCTTCACCGAGCTACTCACCGGGATGGCCGCAGCCAACGCCTCACCCGCTGACCACAAG CAGCAGCAGGCGTGGCAGCCGATGACCGTCGCCGCGGCCACCGCCGACTACATCGGCTTC GCCGCCGCCGCCGCGCCGCATACGCAGCCGCGGAAATCCGCCGCGGGCCATCACTCCGCG ATGCCGCACACCTTCGCATCACCCGCTCCCCACCTCGCCAACATCACCCCCATCGCCATG GCGCCCGCGCAGCACTTCACCCTCACACCCGCCGCCGCCGAGCACCACGCGGAGATGACG CACTACTCGTTCGACCACTTCATGCCCGTCCACGCGGCAGCAGCGGCGGCGGCGGCGGCC TCCACCCCGGCCGGCGGCGACTACAACCTCAACTTCTCCATGTCCTCGGGTCTTGTGGGT GTCCACAGTAGGGGGACCCTTCAGTCCAATTCGCAGTCTCACCTCTCCAGCCATCACCAC CACCATCACCAGCAACAGCAGCAGCAGCAGCAGCTGCAGAGGCTGTCTGCTCCGCTGGAT GCGCCCAACATTCCGTTCCTCTTCAGCCCGGCCGCCGCGCCCACCGCCGCGGACACCCAG TTCGCCGCCGCATTGCAGCTCTGGGACGGGTTCCGGCACGCCGACATCAAGGAGAAGGGC AAGCACTGATCAGATCAGCAGCCGCGGGCATCGACGGCGACGTCTCTTCTTGGATGGAAG TGAAAACATCAAAACGTTGCAAGCCATTCCTGTGAGCAACATCCACAGCTTGAAGCTGCC ATAAGTGAATGCTGGATGCATTCTCGGAAGTAGAGCATCAACTGCACATCTACCTTGGTC ACGGGAGGACCTCATCATCGCTATTCAGATGATCTTGTGCTTTTCTCTGCCTGTTGTTGT ATTCATTTTGTTGAGTTGAGAATTTGGGAGCATTACTCGCCGGAGTGCCCTGAGGAGGGG ACGCCCTTGTAATCCTTTCTGTTGTAAACTATGTCAATGGATGCATGCGGCTCTGGACTG GATTGGTTCTTTGCCTCTTTTGACACTGTGAGATCGGTTGCCTGTCAATTTTATTGTTCT CGGTTGTGAGAGAAG