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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0150200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:2613935:2616323:1 gene:Os07g0150200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S12-1. (Os07t0150200-01)
Sequence

ATGGCGGAGGAGACCCCAGTTGAGACTCCAGCTGCCCCGGTTCTTGGGGAGCCCATGGAT
CTGATGACTGCTCTGCAGCTTGTGATGAAGAAGTCAAGTGCTCATGATGGGCTTGTGAAG
GGTCTCCGTGAGGCTGCCAAGGCCATCGAGAAGCATGCTGCTCAGCTTTGTGTGCTTGCT
GAGGACTGCGACCAACCTGATTATGTCAAGTTGGTTAAGGCTCTGTGTGCTGAGCACAAC
GTTCACCTTGTTACCGTGCCTAGTGCTAAGACTCTTGGCGAGTGGGCAGGGCTTTGCAAG
ATTGACTCTGAGGGCAAGGCAAGGAAGGTTGTGGGCTGCTCCTGCGTCGTTGTCAAGGAC
TATGGTGAAGAGTCTGAGGGCCTTAACATAGTGCAGGACTATGTCAAATCGCACTAG

Peptide Sequence

PEP ID

Os07t0150200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:2613935:2616323:1 gene:Os07g0150200 transcript:Os07t0150200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S12-1. (Os07t0150200-01)
Sequence

MAEETPVETPAAPVLGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLA
EDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKD
YGEESEGLNIVQDYVKSH

Transcript Sequence

Transcript ID

Os07t0150200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:2613935:2616323:1 gene:Os07g0150200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S12-1. (Os07t0150200-01)
Sequence

CTCACCCTCCTCGCGAAAACCCTAACCCCGCCGCCGCCGCCGCTCTTCGCCACAAGATCG
TTTCGTCGCAGTCGGTGTTCCGGTCTTTTGAGCGCGGAGATGGCGGAGGAGACCCCAGTT
GAGACTCCAGCTGCCCCGGTTCTTGGGGAGCCCATGGATCTGATGACTGCTCTGCAGCTT
GTGATGAAGAAGTCAAGTGCTCATGATGGGCTTGTGAAGGGTCTCCGTGAGGCTGCCAAG
GCCATCGAGAAGCATGCTGCTCAGCTTTGTGTGCTTGCTGAGGACTGCGACCAACCTGAT
TATGTCAAGTTGGTTAAGGCTCTGTGTGCTGAGCACAACGTTCACCTTGTTACCGTGCCT
AGTGCTAAGACTCTTGGCGAGTGGGCAGGGCTTTGCAAGATTGACTCTGAGGGCAAGGCA
AGGAAGGTTGTGGGCTGCTCCTGCGTCGTTGTCAAGGACTATGGTGAAGAGTCTGAGGGC
CTTAACATAGTGCAGGACTATGTCAAATCGCACTAGATATAGCATTCTTATATCCAGAAC
GTGTGCTCGACATTCTGTACCTTTTGTTTTAATTTATGCTTGGTTCTAGGGCTTGCTAGG
AGATAAGAATTCTTTTCAAGTGCGAGCCAGGGAGATATGAGCAAAATTTGAACCTCTGAA
TTTATGTTTACCGTGCTGAAAATCGTCTGCTTTTAATACAAATCATCATCCGAAGCTGAG
GATCTGTTTGCCC