Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0143200-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:2207362:2209018:1 gene:Os07g0143200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIL14 description:Phytochrome-interacting bHLH factor, Cross-talk between light and stress signaling (Os07t0143200-01);Cold-induced alternative splicing variant of OsPIF14 (Os07t0143200-02)
Sequence	ATGGTTCTTGATCGATGTAAAGATTGGAGGATTTCGTTCTGTTTGCTTGCGTGGCGTAGC TCGGATGGCGAGCTGGTGGAGCTCCTGTGGCAGGACGGGGGCGTCGTCGCGCACGCGCAG ACGCGCCACCGATCGTCCGACGTCCTCGCCCGGAGCGGCGTCACCGGCGAGGAGGAGACG GCGTCCGCGTGGTTCGCGGATGGCGGTGGCGGCGGCGGCGGCGACGACGACGCGCTGGGC CTGGGCATGGGCAGGGACATCTACTCGCAGCTCTGGCACAGCTTCGCCAATGTCGACGGG CACGCGGCGGGCGCGCTCGCGCTCGCGACGCCGACGCCGACGCCGCGGGCGGCGGCGAGG AGCGACGACGTGTCGAGCCGTCTCGACGAGGCCGACCTGAGCATCTGCGGCAGCAACGCG GTCGTGGCGCCGGCGCTGCCCGCGGACGACGACGACGACATCGACGCCGCCGCGCCGCGC GAGGAGGAGGAGGAGGAGGAGGAGGGGCCGGGCGCCGCGCGCGCCGCCGGCGCGTCGTCG TCGGGCGGGTCGGGGAGCGGGAGCGGGAGCTACCCGCTGTTCAAGCGGGGGAGGGAGGAG CTGGTTGACAGCCTTAGCGAGGTCGCCGACGAGACCCGGCCGTCGAAGCGGCCGGCGGCG AAGCGCCGGACTCGCGCCGCCGAGGTCCACAACCTGTCAGAGCGTGTAAGACCTCAAGAA CACCAACCAACCATTGATGGATAG

Peptide Sequence

PEP ID	Os07t0143200-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:2207362:2209018:1 gene:Os07g0143200 transcript:Os07t0143200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIL14 description:Phytochrome-interacting bHLH factor, Cross-talk between light and stress signaling (Os07t0143200-01);Cold-induced alternative splicing variant of OsPIF14 (Os07t0143200-02)
Sequence	MVLDRCKDWRISFCLLAWRSSDGELVELLWQDGGVVAHAQTRHRSSDVLARSGVTGEEET ASAWFADGGGGGGGDDDALGLGMGRDIYSQLWHSFANVDGHAAGALALATPTPTPRAAAR SDDVSSRLDEADLSICGSNAVVAPALPADDDDDIDAAAPREEEEEEEEGPGAARAAGASS SGGSGSGSGSYPLFKRGREELVDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERVRPQE HQPTIDG

Transcript Sequence

Transcript ID	Os07t0143200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:2207362:2209018:1 gene:Os07g0143200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIL14 description:Phytochrome-interacting bHLH factor, Cross-talk between light and stress signaling (Os07t0143200-01);Cold-induced alternative splicing variant of OsPIF14 (Os07t0143200-02)
Sequence	ATGGTTCTTGATCGATGTAAAGATTGGAGGATTTCGTTCTGTTTGCTTGCGTGGCGTAGC TCGGATGGCGAGCTGGTGGAGCTCCTGTGGCAGGACGGGGGCGTCGTCGCGCACGCGCAG ACGCGCCACCGATCGTCCGACGTCCTCGCCCGGAGCGGCGTCACCGGCGAGGAGGAGACG GCGTCCGCGTGGTTCGCGGATGGCGGTGGCGGCGGCGGCGGCGACGACGACGCGCTGGGC CTGGGCATGGGCAGGGACATCTACTCGCAGCTCTGGCACAGCTTCGCCAATGTCGACGGG CACGCGGCGGGCGCGCTCGCGCTCGCGACGCCGACGCCGACGCCGCGGGCGGCGGCGAGG AGCGACGACGTGTCGAGCCGTCTCGACGAGGCCGACCTGAGCATCTGCGGCAGCAACGCG GTCGTGGCGCCGGCGCTGCCCGCGGACGACGACGACGACATCGACGCCGCCGCGCCGCGC GAGGAGGAGGAGGAGGAGGAGGAGGGGCCGGGCGCCGCGCGCGCCGCCGGCGCGTCGTCG TCGGGCGGGTCGGGGAGCGGGAGCGGGAGCTACCCGCTGTTCAAGCGGGGGAGGGAGGAG CTGGTTGACAGCCTTAGCGAGGTCGCCGACGAGACCCGGCCGTCGAAGCGGCCGGCGGCG AAGCGCCGGACTCGCGCCGCCGAGGTCCACAACCTGTCAGAGCGTGTAAGACCTCAAGAA CACCAACCAACCATTGATGGATAGATGGTGTTGCATCATTTGCAACAAGGTGAATGTTCT TGATTTTTTTTGCTGTTCTTGCTGCAGAGAAGAAGGGATAGGATCAATGAGAAGTTGAGA GCATTGCAAGAACTGGTACCTCATTGCAACAAGACTGACAAAGCATCCATACTAGATGAA GCAATTGAGTACTTGAAGTCCCTGCAAATGCAAGTTCAGATCATGTGGATGACTACCGGG ATTGTGCCGATGATGTTCCCCGGTACCCACCAGCTCATGCCACCGATGGGCATGGGATTG AACACGGCATGCATGCCTGGGGCTCAAGCTCAAGGCCTGAATCAGATGCAAAGAACAACA TATTACATGAACAATTCTCTGCCAAACCAGATGCCTCAGATCCCTTCTCCAGCTATGAAT GCACCCAGTGTTCCAGACGATATGCAGAATGATAATCGCATCCGCGGGCCAAGAAATCCT TTTCTTCATTGCAATGATACACTGACAGCAACAGCTCAGGTGCCAGGTTTGTTTACCTAT GGATCTCAAATTGCAGAACAAAATGAGATTCAGGAGTTACTCTCTGGCGCTGTCATTCCA TCCTCATCTGATGGGACCATAAAATAA