Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0142700-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:2187512:2188973:-1 gene:Os07g0142700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os07t0142700-00)
Sequence	ATGCCGCCGCCGCCGCCGACGCCGCCGCCATCGCCACCGGTGCGCGTGGTGTCGACGCGC ACGGTGAAGCCATCGCGGCCACGGCCGCGGGAGCGCATCCCGCTCACCACCTGGGACGTG TCCCTCCTCGCCGCCGACTACATCCAGAAGGGCCTCCTCTTCCGGCCACCGCCCGCCACT CTCCACCTCGTCGAACATCTCGCCGCCGCCCTCGCCGACGCGCTCCACGTGTACTACCCC GTCGCCGGCCGCTTCGCCACCGACAAGCACCCCGGCGGCGGCTGCTCCGTCTCCATCGAC TGCGACGGCCAGGGCGCCCAGATCGTCCACGCCGTCGCCGATGGCGTCTCCACCGCTGAC ATCCTCCCTCCCGACGTCGATGTCCCGAGTGGCATCGTCCGCTCCTTCTTCCCTCTCGAT GAGGCTGTCAACTACGATGGCCATGAGCTCCCGCTCTTCGTCGTCCAGGTCACCGAGCTC GTCGATGGCGGCGTCTTCCTTGGGTTCGTGTACAACCACGCGCTCTCCGATGGCACCGCC TTCTGGGACTTCCTCAACGCCTGGGCCGAGATCGCGCGCGCTAAGCTCGAGAACGCGGTG GCGACGTCGCGCGCGCCTCTCCTGGAGCGTTGGTCGCCCGACGGCGGCGCGGCGGCGCCG GTGGTGCTCCCTTACGACGACCTGGCGGGGCTCATCGCGAGGACAACGACGACGACACCT CCGCTGCTGCGCGAGCGGATGCTGCACTTCTCGGCGGAGTCACTGGCGGCGCTCAAGGAG CGCGCGCGGTGGGAGCTCCTCGCCGCCGGGGACGCAGCCGGCGCGGCCGCCGTGACGAGG TTCCAGGCGCTGAGCTCGCTGCTATGGCGGTGCGTCACCCGCGCGCGGCGGCTGGCGCCG GGCCGGGAGGTGGTGTTCCGCGCGTCGGTCAACAGCCGCGGCCGCCTCCGCCCGCCGCTG CCACCGGAGTACTTCGGGAACAGCATCCTCCCCGCGTCGACGGAGGCGGTGCCGGCGTCG GAGCTCCTGGCGCGCGGGCACGGGTGGGCGGCCGCCGCCGTGGGCCGCGCGGTGGCCGCG CACACCGACGAGCGCATCCGCGCGCGCTCGGCGGCGGCGCCGTCGGTGTCGGCGTTCAGG CTGTTCGACGCGAGCGGCGTGTTCGTGAGCAGCTCGCCGCGGTTCGACATGTACGGGTGC GACTTCGGGTGGGGGAAGGCGGTGGCGGCGAGGAGCGGCAAGGGGAACAAGTACGACGGG AAGGTGTCGCTGTTCCCGGGGCGGGACGGCGGCGGCGGCGGCGGCATCGACGCCGAGGTG GAGCTGGCGCCGGAGCACATGGCGGCGCTGGAGGAGGACGGCGAGTTCTGGGCCGCCGTC ACGCCGGACCACCTGCTGCTGGTCAACGACAACAACGACAAAGCTTGA

Peptide Sequence

PEP ID	Os07t0142700-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:2187512:2188973:-1 gene:Os07g0142700 transcript:Os07t0142700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os07t0142700-00)
Sequence	MPPPPPTPPPSPPVRVVSTRTVKPSRPRPRERIPLTTWDVSLLAADYIQKGLLFRPPPAT LHLVEHLAAALADALHVYYPVAGRFATDKHPGGGCSVSIDCDGQGAQIVHAVADGVSTAD ILPPDVDVPSGIVRSFFPLDEAVNYDGHELPLFVVQVTELVDGGVFLGFVYNHALSDGTA FWDFLNAWAEIARAKLENAVATSRAPLLERWSPDGGAAAPVVLPYDDLAGLIARTTTTTP PLLRERMLHFSAESLAALKERARWELLAAGDAAGAAAVTRFQALSSLLWRCVTRARRLAP GREVVFRASVNSRGRLRPPLPPEYFGNSILPASTEAVPASELLARGHGWAAAAVGRAVAA HTDERIRARSAAAPSVSAFRLFDASGVFVSSSPRFDMYGCDFGWGKAVAARSGKGNKYDG KVSLFPGRDGGGGGGIDAEVELAPEHMAALEEDGEFWAAVTPDHLLLVNDNNDKA

Transcript Sequence

Transcript ID	Os07t0142700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:2187512:2188973:-1 gene:Os07g0142700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os07t0142700-00)
Sequence	AAGAAGAGCACCCAACGCTCGCAATCTCCTCAGGATGCCGCCGCCGCCGCCGACGCCGCC GCCATCGCCACCGGTGCGCGTGGTGTCGACGCGCACGGTGAAGCCATCGCGGCCACGGCC GCGGGAGCGCATCCCGCTCACCACCTGGGACGTGTCCCTCCTCGCCGCCGACTACATCCA GAAGGGCCTCCTCTTCCGGCCACCGCCCGCCACTCTCCACCTCGTCGAACATCTCGCCGC CGCCCTCGCCGACGCGCTCCACGTGTACTACCCCGTCGCCGGCCGCTTCGCCACCGACAA GCACCCCGGCGGCGGCTGCTCCGTCTCCATCGACTGCGACGGCCAGGGCGCCCAGATCGT CCACGCCGTCGCCGATGGCGTCTCCACCGCTGACATCCTCCCTCCCGACGTCGATGTCCC GAGTGGCATCGTCCGCTCCTTCTTCCCTCTCGATGAGGCTGTCAACTACGATGGCCATGA GCTCCCGCTCTTCGTCGTCCAGGTCACCGAGCTCGTCGATGGCGGCGTCTTCCTTGGGTT CGTGTACAACCACGCGCTCTCCGATGGCACCGCCTTCTGGGACTTCCTCAACGCCTGGGC CGAGATCGCGCGCGCTAAGCTCGAGAACGCGGTGGCGACGTCGCGCGCGCCTCTCCTGGA GCGTTGGTCGCCCGACGGCGGCGCGGCGGCGCCGGTGGTGCTCCCTTACGACGACCTGGC GGGGCTCATCGCGAGGACAACGACGACGACACCTCCGCTGCTGCGCGAGCGGATGCTGCA CTTCTCGGCGGAGTCACTGGCGGCGCTCAAGGAGCGCGCGCGGTGGGAGCTCCTCGCCGC CGGGGACGCAGCCGGCGCGGCCGCCGTGACGAGGTTCCAGGCGCTGAGCTCGCTGCTATG GCGGTGCGTCACCCGCGCGCGGCGGCTGGCGCCGGGCCGGGAGGTGGTGTTCCGCGCGTC GGTCAACAGCCGCGGCCGCCTCCGCCCGCCGCTGCCACCGGAGTACTTCGGGAACAGCAT CCTCCCCGCGTCGACGGAGGCGGTGCCGGCGTCGGAGCTCCTGGCGCGCGGGCACGGGTG GGCGGCCGCCGCCGTGGGCCGCGCGGTGGCCGCGCACACCGACGAGCGCATCCGCGCGCG CTCGGCGGCGGCGCCGTCGGTGTCGGCGTTCAGGCTGTTCGACGCGAGCGGCGTGTTCGT GAGCAGCTCGCCGCGGTTCGACATGTACGGGTGCGACTTCGGGTGGGGGAAGGCGGTGGC GGCGAGGAGCGGCAAGGGGAACAAGTACGACGGGAAGGTGTCGCTGTTCCCGGGGCGGGA CGGCGGCGGCGGCGGCGGCATCGACGCCGAGGTGGAGCTGGCGCCGGAGCACATGGCGGC GCTGGAGGAGGACGGCGAGTTCTGGGCCGCCGTCACGCCGGACCACCTGCTGCTGGTCAA CGACAACAACGACAAAGCTTGA