Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0142000-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:2170647:2172805:1 gene:Os07g0142000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os07t0142000-01)
Sequence

ATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATT
GCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAA
GCTAAGAGACTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCC
GCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACG
GCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTT
CTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGG
TCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCT
GCAATTGGCACCCAAGTGAACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGA
GACCTGAAGAATTTTCTCCTGGTGATTGCCGGGTTCTTCGCGGCCGCTATCATTGGGAGC
TGGTGCAATCTCCTCACTGTCATTTACATTGGATTTGTGTGTGCTCACACTCTCCCGGTG
CTGTATGAGAAGAACCAAGAAAAAGTGGACGAGTTCCTGTACAACACACTTGGCCTGCTT
CAGAATCAGTATCAGAAACTTGACAAGGGTGTCCTGGGCAAGGTGCCCAAAGGGATCATC
AAGCTTAAGAAGAGCGATTAG

Peptide Sequence

PEP ID

Os07t0142000-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:2170647:2172805:1 gene:Os07g0142000 transcript:Os07t0142000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os07t0142000-01)
Sequence

MPEHSENAAANIVDSIVDAIADNLPKQKSVRFEDGSISDQAKRLFGGQKSVHHVLGGGKS
ADVLLWRNKKISSSVLAVATAVWVFFEWLDYHFLTIACFVLVLGMVVQFAWSTFAGMLNG
SPSKVPRVELPDELFANIGSAIGTQVNKFLGTLQDVSCGRDLKNFLLVIAGFFAAAIIGS
WCNLLTVIYIGFVCAHTLPVLYEKNQEKVDEFLYNTLGLLQNQYQKLDKGVLGKVPKGII
KLKKSD

Transcript Sequence

Transcript ID

Os07t0142000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:2170647:2172805:1 gene:Os07g0142000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os07t0142000-01)
Sequence

AATTCCAGTAACTTTCCTCTCATCTCTCACAGAAAAAACATTCCTCTCATCTCCAATCAG
CAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTC
TGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACA
TTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGAT
TTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGACTCTTCGGTGGTCAGAAGTCTGTCC
ATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATAT
CTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACC
ACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGT
CCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGG
ATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGAACAAGTTCTTGGGCA
CTCTTCAGGATGTGTCTTGTGGAAGAGACCTGAAGAATTTTCTCCTGGTGATTGCCGGGT
TCTTCGCGGCCGCTATCATTGGGAGCTGGTGCAATCTCCTCACTGTCATTTACATTGGAT
TTGTGTGTGCTCACACTCTCCCGGTGCTGTATGAGAAGAACCAAGAAAAAGTGGACGAGT
TCCTGTACAACACACTTGGCCTGCTTCAGAATCAGTATCAGAAACTTGACAAGGGTGTCC
TGGGCAAGGTGCCCAAAGGGATCATCAAGCTTAAGAAGAGCGATTAGTTTCACTAGCTGC
TGCTGCTGCTAATGCTGCGTACAGTCAATCAGAATACTGCGTAATTTGGACAGATGTTAG
CTTCCCCTGAACAGTTAATTGTGTACAGTATTGGAAAACACCGTGTCAGTGATGCTAGTG
GTATACTCCTATATTGTAGGCCAAATTCATCAGTGGCAGATTGTTTCAGCTAGTCTCATG
TGTTTTGCCCATGAGAGAAATTGGGAAAAAAAATAAAAGGTGATTTGTG