Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0141600-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:2144184:2151799:1 gene:Os07g0141600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serologically defined breast cancer antigen NY-BR-99. (Os07t0141600-01)
Sequence	ATGGCAAGCCTTGCTGATTCTTTCTTAGCAGATCTTGATGAACTGTCAGACAATGAAGCC TATCCTGAAGAAGAAAATGCTGAGGCAGTGGGTATGGATGAGGATGGCGGTGAAGATATG CTTGACCTTGAGTCTCTTAATTATGATGATCTTGACAGTGTCTCAAAGCTGCAGAAGACA CAGTGTTATAATGACATAATGCAGAAAGTTGAGGATGCACTTCAGAAAGGCACAGACTTC TCCAATCAAGGGTCCATCTTGGAGGAGGATCCAGAATACCAGCTTATTGTTGATTTCAAT GCTTTGTCAGTAGATATTGAGAATGAAATCATTATAATACATAATTTCATACGCGACAAG TATAGACTGAAGTTTCCTGAACTGGAATCCCTTGTTCATCATCCTATTGACTATGCCCGT GTTGTTCAGAAGATTGGAAATGAGATTGATTTGACACTCGTAGACCTGGAAGGGCTTTTA CCTTCTGCAATTATAATGGTTGTGTCAGTGACAGCATCAACAACTAACGGGAAGCCTCTT TCTGAGGAGAATCTGGCAAAAACCATTGAAGCATGTGAGAGAGCCCTTACTCTTGATGCT GCAAAGAAGAAGGTGCTTGATTTTGTCGAGAGCAGAATGGGTCGCATTGCACCAAACCTT TCTGCTATTGTTGGCAGCGCTGTTGCCTCAAAACTAATGGGAACTGCTGGTGGTTTGGGA GCACTTGCAAAAATGCCTGCTTGCAATGTTCAGTTACTTGGGGCAAAGAAGAAGAATCTT GCTGGATTTTCTAGTGCCACATCTCAGTTTCGTGTTGGCTATCTTGAACAAACTGAAGTA TTTCAGAGCACACCTCCAGCTCTGAGAACTAGTGCTTGCAGACTTATAGCTGCAAAATCA ACTCTAGCTGCAAGAATCAATTCAATCAGAGGTGATCCAACTGGAAAAGCTGGCCGGAAC TTGTTAGAAGAAATTCGTAAGAAGATTGAGAAGTGGCAAGAACCGCCTCCTGCAAAGCTT CCAAAACCACTTCCTGTTCCAGACTCTGAGCCTAAAAAGAAGAGAGGAGGCCGTCGGCTT CGGAAAATGAAAGAAAGATATGCGCAGACTGACATGATGAAGCTTGCGAACCGAATGCAG TTTGGGGTACCAGAAGAAAGCTCATTAGGTGATGGCTTGGGGGAAGGCTATGGCATGCTT GGACAGGCAGGAAGCGGGAAACTACGTGTATCAGCTGCGCAAAGCAAACTTGCTGCTAAA GTGGCCAAAAAATTCAAGGAGAAGAGCTATGGTAGCAGTGGTGCAACATCTGGACTGACG TCTAGTTTGGCCTTTACACCAGTTCAGGGAATAGAACTATCAAATCCCCAGTCCCATGGG AACCTGCTAGGCAGTGGAACACAAAGCACTTACTTTTCTGAGACTGGAACATTTTCAAAG ATCAAGAGGAACTGA

Peptide Sequence

PEP ID	Os07t0141600-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:2144184:2151799:1 gene:Os07g0141600 transcript:Os07t0141600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serologically defined breast cancer antigen NY-BR-99. (Os07t0141600-01)
Sequence	MASLADSFLADLDELSDNEAYPEEENAEAVGMDEDGGEDMLDLESLNYDDLDSVSKLQKT QCYNDIMQKVEDALQKGTDFSNQGSILEEDPEYQLIVDFNALSVDIENEIIIIHNFIRDK YRLKFPELESLVHHPIDYARVVQKIGNEIDLTLVDLEGLLPSAIIMVVSVTASTTNGKPL SEENLAKTIEACERALTLDAAKKKVLDFVESRMGRIAPNLSAIVGSAVASKLMGTAGGLG ALAKMPACNVQLLGAKKKNLAGFSSATSQFRVGYLEQTEVFQSTPPALRTSACRLIAAKS TLAARINSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRL RKMKERYAQTDMMKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK VAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQSHGNLLGSGTQSTYFSETGTFSK IKRN

Transcript Sequence

Transcript ID	Os07t0141600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:2144184:2151799:1 gene:Os07g0141600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Serologically defined breast cancer antigen NY-BR-99. (Os07t0141600-01)
Sequence	ATCCTCGCTACGGGGCGGCGCGGCTGCGGCGGCAGCGGCGGCGGCGGAGAGGCGATCAAT CGACGCAGACGAAGGTGTACTGATCCTCCTCAATAAGTTGGAGCAGGAGTTATCATGGCA AGCCTTGCTGATTCTTTCTTAGCAGATCTTGATGAACTGTCAGACAATGAAGCCTATCCT GAAGAAGAAAATGCTGAGGCAGTGGGTATGGATGAGGATGGCGGTGAAGATATGCTTGAC CTTGAGTCTCTTAATTATGATGATCTTGACAGTGTCTCAAAGCTGCAGAAGACACAGTGT TATAATGACATAATGCAGAAAGTTGAGGATGCACTTCAGAAAGGCACAGACTTCTCCAAT CAAGGGTCCATCTTGGAGGAGGATCCAGAATACCAGCTTATTGTTGATTTCAATGCTTTG TCAGTAGATATTGAGAATGAAATCATTATAATACATAATTTCATACGCGACAAGTATAGA CTGAAGTTTCCTGAACTGGAATCCCTTGTTCATCATCCTATTGACTATGCCCGTGTTGTT CAGAAGATTGGAAATGAGATTGATTTGACACTCGTAGACCTGGAAGGGCTTTTACCTTCT GCAATTATAATGGTTGTGTCAGTGACAGCATCAACAACTAACGGGAAGCCTCTTTCTGAG GAGAATCTGGCAAAAACCATTGAAGCATGTGAGAGAGCCCTTACTCTTGATGCTGCAAAG AAGAAGGTGCTTGATTTTGTCGAGAGCAGAATGGGTCGCATTGCACCAAACCTTTCTGCT ATTGTTGGCAGCGCTGTTGCCTCAAAACTAATGGGAACTGCTGGTGGTTTGGGAGCACTT GCAAAAATGCCTGCTTGCAATGTTCAGTTACTTGGGGCAAAGAAGAAGAATCTTGCTGGA TTTTCTAGTGCCACATCTCAGTTTCGTGTTGGCTATCTTGAACAAACTGAAGTATTTCAG AGCACACCTCCAGCTCTGAGAACTAGTGCTTGCAGACTTATAGCTGCAAAATCAACTCTA GCTGCAAGAATCAATTCAATCAGAGGTGATCCAACTGGAAAAGCTGGCCGGAACTTGTTA GAAGAAATTCGTAAGAAGATTGAGAAGTGGCAAGAACCGCCTCCTGCAAAGCTTCCAAAA CCACTTCCTGTTCCAGACTCTGAGCCTAAAAAGAAGAGAGGAGGCCGTCGGCTTCGGAAA ATGAAAGAAAGATATGCGCAGACTGACATGATGAAGCTTGCGAACCGAATGCAGTTTGGG GTACCAGAAGAAAGCTCATTAGGTGATGGCTTGGGGGAAGGCTATGGCATGCTTGGACAG GCAGGAAGCGGGAAACTACGTGTATCAGCTGCGCAAAGCAAACTTGCTGCTAAAGTGGCC AAAAAATTCAAGGAGAAGAGCTATGGTAGCAGTGGTGCAACATCTGGACTGACGTCTAGT TTGGCCTTTACACCAGTTCAGGGAATAGAACTATCAAATCCCCAGTCCCATGGGAACCTG CTAGGCAGTGGAACACAAAGCACTTACTTTTCTGAGACTGGAACATTTTCAAAGATCAAG AGGAACTGAGCAGAGAAGTTGGTCTCTTCATCCCACCCACTGCATCCGTTTTACCCACAG GAAAGGCCAACGGATTGACACTAGAAGGAATTCATCAAACTCGGTGAGCTGGCACTTGAG ATAGGACGAAGATGACAAGGATTTTATCCACAGATGCATCTTGATTTGAGGATAAATTAA TGAATCAATCAAGTAATACTCTGGATGTGTTTGGGAGCTGATGCTGAGGCAGAGGCAGAG GTCGAGGCAGCAGAATCATCTCCATGGCCTTGACGGTTATCAGGATGCTTCACATCTGGA TGGTTGGGAGCTGAGACTGAGGCACAGGTTGAGGCAGCATCAGCATCCAAGCTTCCAGCA GCGTCTCCCTGGCCTTGACGGTTACCATGATGCTCCAAATCTGGATGGTTGGGGTGATCT TTTAGAGCAATTTCCACCTTATCTGGGTTGCAGTCACCATGAAGCTCAAATGATCGCAAG CTCGGAAGACGCTCAATTCCAGAAATGGATTTCATCTCCCTGAAACTCCAAACAATTTTT TCCAACTTAGGATTCTTGCTGAAGCTGATATCGGTAATGTCTTCGCCGTGGATGAGAAGA ACCTTGAGATGCTGGAACTGTTTTTCCCCAAGGGTGAGCTTGCTTTGGACATATGACCTG CACCGGAGCCGGAGATACCGCAGTGCTTTGAGATTGCCAACAACTGCCATATCTTGTTCT CCTAGATGAGTGTCGCAAAGAGTTAACTTCGCAAGTCGGCTGAGCTCCTTGATCCAACGA GGCAGCCCACATCTTATGCCGCATATGTTCAGGCTCTCAAGAAGCTTTGGATATGAGAAT GCTGTAGGCTCTGCCATGTTCATGTCAGGAAAATTCTCGCATCCATCTGGTACTTCAACA CGGATTGACAGAGAGATGAGACTTTTATGCAACTTCTCAATTGCCTGGACTAAGTGCTTG AAGCTGTTTTGGTCACCATGGAAGACCACACCTAGCTTCCTAAGTTGTAGTAGCTTCCCA ATGTCCATCAGCTCATCTTCTATGCCAGAAACAACAACATGGCACAATACCTGCAGATTT GTCATGCTTCCGATCCCACGTGGCATACGCACTGTGGAAAATTTTTCGGTCTGTTCATTT TGTTGTTGGGTGTATCCAGAGAGCAAATGTTTTAGCATTGGAAGAACTAAAGATTTTGTA GCGAATGAGCTCACGGTTGTTTCTCTGATGTCCAGTGTCTCCAGCTGCTGGAGATTTTGA ATTTTCTTGGGAAGTTTGGTGAGCTTACTTCTTCGAAGGTTCAGATACCTGAGCTGAAAT AGTTTGCAGATGTTCTCCAGATGATGGTCCTTTAAGCCATCACAGCCTTCTAGATCCAGC ACTTTGAGCAATCCCAGCCGAGAGAATGCTGGCAATGACTTCAGAAAAATTGTGAGGTCA TCCAAGGGCTGATCATAATGCTTGCGCATGTTCCAGCATGAGGAAGAACTGGGGCGTGGA GAAGCCTGAAGCTCTGCTAGGACCTGTTGCAGCTGACTCCTGTTCCAAATCGAAACACGG TGTGCAAAATCTGGCTGAAGATCTGCATCCACAAAGTTATCCTCTCTAGCAACCTTGGTG ATGAACTTTGAGATCAAGCCATTCACTGCACAGCTCTTGATCTTCCCAGAAGCGCCGATG TCTCTCTCAAGAACAAATCTTTTTGCTAAGAGCACACCAAAGCATCGCTCGGCTTCATCC AGCGCTGTCTGCCCGTTTCGTTCTGTGTTTATGCTCTCAGCAGCCCATCTTCTGACTAAG CTTGTTCTCCTGATCATCATAGTACTGTTGCTACTGCTTCCATCATCTTGGATAAATAGA GAGAGATACGTCAAGCAGCTCTTGTAATGGACAGGCAGGTCGTTGTACCAGAACATCAGG ATTTGCTGCATGTTTTCATCCAGCATTAAACCATGTGAATCATGCAGGCTATCACACAAG CCCTGAAGTTCTTCCCTGTTCCTGTTAGGATTGGCATAAAGGACATGGAGGAATGCTCTG ATGCACATGTCAGTGGAGTTGGAGGCACATTTTGACAGTATGGATCTAATCACTTCATCC AGGTTACCGTTGCTGGGATAGTTTTCAACCAGGGAGACAGCCTTGGCATGGAAGAAGTCG ATGAGATGATCCAGAGGAGGGAAGACTCTGTCATGTGGTGAACAGGAGTAGGCTACGGCA GGTGACCGGGTTGTCAGCAGGATGGCACTGTGAGCCGTGTTGCCGGGGAAAGCTGATTCG ATGCCACGCCATAGCGATTCATCAGGAACATCATCAAGAACAATTAGGTAGCTCTTATCT TTCAGGAAGTTCTCCATCATCTCCTGAAATGTCATTCCTTGATGAAATCCCATCTCGGAT GCCATCGTTTCTG