Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0134800-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:1860739:1866531:-1 gene:Os07g0134800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 1 description:Similar to Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II). (Os07t0134800-01);Similar to Succinate dehydrogenase. (Os07t0134800-04)
Sequence	ATGTGGCGCGGCTGCGTCTCGCGTGGCCTCAGGAGCCTCTCCAAGGGCAAGGGCTCCTCC TCCTCCGCCCCCGTCTCCGCCGCCGCTAGGCTCTTCTCCACCGCCTCGTCGTCGTACACG GTGGTGGATCACTCGTATGACGCGGTCGTGGTGGGAGCCGGCGGCGCGGGGCTCCGTGCG GCGATCGGGCTCTCCGAGCACGGGTTCAACACGGCTTGCATCACCAAGCTCTTCCCCACG CGGTCGCACACCGTCGCGGCGCAGGGTGGCATAAATGCTGCTCTTGGAAACATGACGGAA GATGACTGGAGATGGCATATGTATGACACTGTCAAGGGTAGTGATTGGCTTGGTGACCAG GATTCTATTCAGTATATGTGCAGAGAAGCACCAAAAGCAGTTATAGAACTTGAAAACTAT GGGTTGCCATTTTCAAGAACTGAAGATGGAAAGATATACCAACGGGCCTTTGGAGGCCAG AGCTTAGATTTTGGGAAAGGTGGGCAGGCCTATCGATGTGCATGTGCTGCTGACAGAACA GGACATGCTATGTTACACACTCTGTATGGTCAAGCAATGAAGCATAATACTCAGTTCTTT GTAGAATATTTTGCGCTAGACCTTATCATGGACAGTGAAGGCACCTGTCAGGGGGTTATT GCTTTGAACATGGAGGATGGCACTCTTCACCGTTTCCGTGCTACAAATACAATTCTGGCC ACAGGAGGTTATGGCAGAGCCTACTTCTCAGCAACCTCAGCTCACACATGCACTGGAGAT GGCAACGCTATGGTTGCACGTGCTGGTTTACCACTTCAGGACCTTGAGTTTGTGCAGTTC CATCCTACAGGCATTTATGGTGCTGGATGCCTTATCACTGAAGGTTCCCGTGGTGAAGGT GGTATCCTTAGGAACAGTGAAGGCGAGCGTTTCATGGAACGATATGCTCCTACTGCAAAA GATCTTGCTTCTCGAGATGTTGTTTCAAGATCTATGACAATGGAAATCAGAGAAGGCCGT GGTGTTGGGCCATTGAAGGACCACATCTATCTGCATCTTAACCATCTGCCTCCAGAAGTT CTTAAGGAGAGGCTTCCTGGTATTTCTGAAACTGCTGCTATTTTTGCTGGTGTTGATGTC ACCAAGGAGCCCATTCCTGTCTTGCCTACTGTGCACTATAATATGGGTGGGATCCCAACA AATTACCATGGAGAGGTAGTGACTATGAAGGGTGACAATCCTGATTCTGTTGTTCCTGGT TTGATGGCTGCGGGAGAAGCAGCATGTGCATCTGTTCATGGTGCAAATCGTCTGGGTGCA AATTCACTTCTTGACATAGTTGTTTTTGGCAGAGCTTGTGCAAACAGGGTAGCTGAAACC GCTAAGCCAGGTGAGAAGCAGAAACCTCTTCAAAAAAGTGCTGGAGAAAAGACCATAGCC TGGTTAGACAAGCTGAGAAATGCAAATGGATCATTGCCAACTTCCAAGATCCGTCTAAAC ATGCAACGTGTTATGCAAAATAATGCTGCTGTCTTCCGTACGCAAGAAACACTCGAGGAA GGTTGCAAATTGATTACCAAGGCATGGGAAAGTTATCATGATGTGAAGATCAGTGACCGG AGTCTCATATGGAATTCAGATTTGATAGAGACCATTGAGTTGGAAAATCTCTTGATAAAT GCATGCATAACCATGCACTCAGCAGAGGCTCGGAAGGAAAGCAGAGGAGCTCATGCTCGT GAAGATTTCACGAAAAGAGATGATGAGCAATGGATGAAGCACTCGCTGGGGTACTGGGAG AATGAGAAGGTTCGCTTGGCATACAGGCCAGTCCACATGAACACATTGGACAGTGAAGTT GAGTCGTTCCCACCCAAGGCGCGTGTTTATTAG

Peptide Sequence

PEP ID	Os07t0134800-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:1860739:1866531:-1 gene:Os07g0134800 transcript:Os07t0134800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 1 description:Similar to Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II). (Os07t0134800-01);Similar to Succinate dehydrogenase. (Os07t0134800-04)
Sequence	MWRGCVSRGLRSLSKGKGSSSSAPVSAAARLFSTASSSYTVVDHSYDAVVVGAGGAGLRA AIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQ DSIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRT GHAMLHTLYGQAMKHNTQFFVEYFALDLIMDSEGTCQGVIALNMEDGTLHRFRATNTILA TGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEG GILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEV LKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTMKGDNPDSVVPG LMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAETAKPGEKQKPLQKSAGEKTIA WLDKLRNANGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLITKAWESYHDVKISDR SLIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEQWMKHSLGYWE NEKVRLAYRPVHMNTLDSEVESFPPKARVY

Transcript Sequence

Transcript ID	Os07t0134800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:1860739:1866531:-1 gene:Os07g0134800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 1 description:Similar to Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II). (Os07t0134800-01);Similar to Succinate dehydrogenase. (Os07t0134800-04)
Sequence	GTCGTCTTCCGCGCCGCCCTCTCCCTCCTCCACCGCCTCCGCCTCCGCCTTCTCTCGTGC CGCCGATCTCCATCGCCGGCGTGCGGTGCACCGAGATCCACCCGAGATGTGGCGCGGCTG CGTCTCGCGTGGCCTCAGGAGCCTCTCCAAGGGCAAGGGCTCCTCCTCCTCCGCCCCCGT CTCCGCCGCCGCTAGGCTCTTCTCCACCGCCTCGTCGTCGTACACGGTGGTGGATCACTC GTATGACGCGGTCGTGGTGGGAGCCGGCGGCGCGGGGCTCCGTGCGGCGATCGGGCTCTC CGAGCACGGGTTCAACACGGCTTGCATCACCAAGCTCTTCCCCACGCGGTCGCACACCGT CGCGGCGCAGGGTGGCATAAATGCTGCTCTTGGAAACATGACGGAAGATGACTGGAGATG GCATATGTATGACACTGTCAAGGGTAGTGATTGGCTTGGTGACCAGGATTCTATTCAGTA TATGTGCAGAGAAGCACCAAAAGCAGTTATAGAACTTGAAAACTATGGGTTGCCATTTTC AAGAACTGAAGATGGAAAGATATACCAACGGGCCTTTGGAGGCCAGAGCTTAGATTTTGG GAAAGGTGGGCAGGCCTATCGATGTGCATGTGCTGCTGACAGAACAGGACATGCTATGTT ACACACTCTGTATGGTCAAGCAATGAAGCATAATACTCAGTTCTTTGTAGAATATTTTGC GCTAGACCTTATCATGGACAGTGAAGGCACCTGTCAGGGGGTTATTGCTTTGAACATGGA GGATGGCACTCTTCACCGTTTCCGTGCTACAAATACAATTCTGGCCACAGGAGGTTATGG CAGAGCCTACTTCTCAGCAACCTCAGCTCACACATGCACTGGAGATGGCAACGCTATGGT TGCACGTGCTGGTTTACCACTTCAGGACCTTGAGTTTGTGCAGTTCCATCCTACAGGCAT TTATGGTGCTGGATGCCTTATCACTGAAGGTTCCCGTGGTGAAGGTGGTATCCTTAGGAA CAGTGAAGGCGAGCGTTTCATGGAACGATATGCTCCTACTGCAAAAGATCTTGCTTCTCG AGATGTTGTTTCAAGATCTATGACAATGGAAATCAGAGAAGGCCGTGGTGTTGGGCCATT GAAGGACCACATCTATCTGCATCTTAACCATCTGCCTCCAGAAGTTCTTAAGGAGAGGCT TCCTGGTATTTCTGAAACTGCTGCTATTTTTGCTGGTGTTGATGTCACCAAGGAGCCCAT TCCTGTCTTGCCTACTGTGCACTATAATATGGGTGGGATCCCAACAAATTACCATGGAGA GGTAGTGACTATGAAGGGTGACAATCCTGATTCTGTTGTTCCTGGTTTGATGGCTGCGGG AGAAGCAGCATGTGCATCTGTTCATGGTGCAAATCGTCTGGGTGCAAATTCACTTCTTGA CATAGTTGTTTTTGGCAGAGCTTGTGCAAACAGGGTAGCTGAAACCGCTAAGCCAGGTGA GAAGCAGAAACCTCTTCAAAAAAGTGCTGGAGAAAAGACCATAGCCTGGTTAGACAAGCT GAGAAATGCAAATGGATCATTGCCAACTTCCAAGATCCGTCTAAACATGCAACGTGTTAT GCAAAATAATGCTGCTGTCTTCCGTACGCAAGAAACACTCGAGGAAGGTTGCAAATTGAT TACCAAGGCATGGGAAAGTTATCATGATGTGAAGATCAGTGACCGGAGTCTCATATGGAA TTCAGATTTGATAGAGACCATTGAGTTGGAAAATCTCTTGATAAATGCATGCATAACCAT GCACTCAGCAGAGGCTCGGAAGGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTCACGAA AAGAGATGATGAGCAATGGATGAAGCACTCGCTGGGGTACTGGGAGAATGAGAAGGTTCG CTTGGCATACAGGCCAGTCCACATGAACACATTGGACAGTGAAGTTGAGTCGTTCCCACC CAAGGCGCGTGTTTATTAGTTCGGGATTCACGCAGCGCCGTAATTCTGTGTGGTGTTAAT AATTCAGGGGCTGGGCATTCCTAGCTGAAAGTGCGACCTGAATTCCATCCTCCTTTTTCC CTCGGTATTTTGTGTAATTTGCTAGAAAAATAAAGGACAAACTCATGCTAATGCTAGTGC CTAACTGGTCCCTTCTGGGCAACTTGT