Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0133100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:1753791:1756075:1 gene:Os07g0133100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Concanavalin A-like lectin/glucanase, subgroup domain containing protein. (Os07t0133100-01)
Sequence	ATGCCCAGTCTCGTCTTGCTCTTGATGATGAATTTCGTGATGATGGTAATTGCCACCTTT CCTGAATTCACATACAACGGATTCAGCGGCGCCAGGAACCTCCTCCTCGACGGCGCCGCT TCCGTGGGAGAAGATGGGATCCTCTCCCTGACGAATGGCAGCAGCGGCGCCCAGCAGCAG GGGCGCTGCTTCTATCCCTACCCTATTCCCCTGCAGTACACCGGTGGTGAGACCCGCTCC TTCACCTCCACCTTCGTCTTCGCCGTCACATGCTCCGGCTCCGGCAGCTGCGGGGATGGG ATGACATTTGTCATCTCCTCGACCGCCGACTTCCCGGCCGCCTCTTCGCCGGCGTACCTG GGCCTTGCCAACCCGCACGATGCATCGTCAAACCCTTTCGTCGCCATAGAGCTCGACACC GTCGCAGACCCGGACGCGACGAACGGCAACCATGTCGCCATTGATTTCAACAGCCTGACG TCCAACTTGTCTAGACCTGCAGGGTACATCTACGACGACGAAGGAGCCGTCGGCAACTCT AGCTTTCAGGCGCTCAAGCTTTCCAGCGGCGACCCGATGCAGGCGTGGGTGAGCTACGAC GCCGGAGCAGCCCGGCTCGACGTCACGCTTGCGCTCGTCCCCATGTTCATGCCCTCCGTG CCGCTACTGTCTTACAACGTCAGCCTCTCGCGATTGCTGTCGGCGGCCGACGATTCTCCC ATGGCGACCAAAGCATATTTCGGCTTCACCGCTTCGACGGGTGGTGATCCCGGTGGCGCT GGCGCCACCCATCAAGTTCTTGGCTGGAGCTTTAGCAACGGTGGATTGCCACTCGACTAC TCGCTGCTGCCCCTGAAACGAGCTCATCAGGGTCAGGATTATAGCAGAAGTAGACGAGCC AACAGGAAGAGCTTCGTCACATGGTTGCCTGCAGCTGCATCAGTGCTCGCCGTGCTTGCA GCCATGGCAGCGTGTCTTGTGCTCCGGTGGTGCTGGAAGAAGAACGCCCGGAGTCGGGAA AACTGGGAAGCAGAGCTGGGACCTCGCCGCTTCGCTTACCGAGACCTCCGCCGCGCCACC GACGGGTTCAAGCATCTGCTGGGGAAGGGTGGCTTTGGCCGCGTCTACGGAGGCGTTCTC TCCGCGTCCGGCATGCCCATCGCCGTCAAGCGTGTCTCGTCTGAGTCCAGGCATGGTATG ACGCAATTCACGGCCGAGATCATCATCCTCGGCCGCCTCCGCCACCGCAACCTCGTTCGC CTCCTCGGCTACTGCCGCCACAAGGAGGAGCTGCTGCTGGTCTACGAGCACATGCCCAAC GGCAGCCTAGATAAGTACTTGCACGAGCACACGTACTCCAGCAACTGCAGGACGCTGGGT TGGCCTCAGAGGCTTCACGTCATCAAGTGCGTCGCGGCGGGGCTGCTCTACCTGCACGAC GACTGGGAGCAGGTCATCGTCCACCGCGACGTCAAGGCCAGCAACGTGCTCCTCGACGCC GACATGAACGGCCGCCTGGGCGACTTCGGCCTCGCGCGGCTGCACGACCACGGCGCCGAC GCGCACACCACCCACGTCGCCGGCACCAGGGGCTACCTCGCCCCGGAGCTCACCAGGTTC GGCAAGGCCACCAAGGCCACCGACGTGTTCGCGTTCGGCGCCTTCGTCCTCGAGGTGGCG TGCGGGCGCCGGCCGATGGGGCACAACGCCCGCGGCGAGCTGCTCGTGCTCGTCGAGTGG GTGCGCGACGCGTGGGCGGCGGGCGGCGGCGGCTCCGTCGTCGACACCATGGACCCGAGG CTGGAGGAGTACTCCGGCGAGGAGGCGGAGCTGGTGCTCAAGCTCGGGCTGCTCTGCTCG CACCCGCTCCCCGCCGCGAGGCCCGGTATGCGCCTCGTCATGCAGTACCTCGACGGCGAC GTGCCGCTGCCGGAGTTCTCGCCGGATTATCTCTGCATCAAAGACGTCGACCAGGTCCAA GTTGGAGACTACTCTCCCTCGGTGGTCACCACGATCACAGGTCTGTCCGGAGGAAGATGA

Peptide Sequence

PEP ID	Os07t0133100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:1753791:1756075:1 gene:Os07g0133100 transcript:Os07t0133100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Concanavalin A-like lectin/glucanase, subgroup domain containing protein. (Os07t0133100-01)
Sequence	MPSLVLLLMMNFVMMVIATFPEFTYNGFSGARNLLLDGAASVGEDGILSLTNGSSGAQQQ GRCFYPYPIPLQYTGGETRSFTSTFVFAVTCSGSGSCGDGMTFVISSTADFPAASSPAYL GLANPHDASSNPFVAIELDTVADPDATNGNHVAIDFNSLTSNLSRPAGYIYDDEGAVGNS SFQALKLSSGDPMQAWVSYDAGAARLDVTLALVPMFMPSVPLLSYNVSLSRLLSAADDSP MATKAYFGFTASTGGDPGGAGATHQVLGWSFSNGGLPLDYSLLPLKRAHQGQDYSRSRRA NRKSFVTWLPAAASVLAVLAAMAACLVLRWCWKKNARSRENWEAELGPRRFAYRDLRRAT DGFKHLLGKGGFGRVYGGVLSASGMPIAVKRVSSESRHGMTQFTAEIIILGRLRHRNLVR LLGYCRHKEELLLVYEHMPNGSLDKYLHEHTYSSNCRTLGWPQRLHVIKCVAAGLLYLHD DWEQVIVHRDVKASNVLLDADMNGRLGDFGLARLHDHGADAHTTHVAGTRGYLAPELTRF GKATKATDVFAFGAFVLEVACGRRPMGHNARGELLVLVEWVRDAWAAGGGGSVVDTMDPR LEEYSGEEAELVLKLGLLCSHPLPAARPGMRLVMQYLDGDVPLPEFSPDYLCIKDVDQVQ VGDYSPSVVTTITGLSGGR

Transcript Sequence

Transcript ID	Os07t0133100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:1753791:1756075:1 gene:Os07g0133100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Concanavalin A-like lectin/glucanase, subgroup domain containing protein. (Os07t0133100-01)
Sequence	GTGCACTAGAAAGTTAAGTTTCAAGATCCAGCAATAACAGAATTAAGGCAAGGCTGCAGC ACCACCATGCCCAGTCTCGTCTTGCTCTTGATGATGAATTTCGTGATGATGGTAATTGCC ACCTTTCCTGAATTCACATACAACGGATTCAGCGGCGCCAGGAACCTCCTCCTCGACGGC GCCGCTTCCGTGGGAGAAGATGGGATCCTCTCCCTGACGAATGGCAGCAGCGGCGCCCAG CAGCAGGGGCGCTGCTTCTATCCCTACCCTATTCCCCTGCAGTACACCGGTGGTGAGACC CGCTCCTTCACCTCCACCTTCGTCTTCGCCGTCACATGCTCCGGCTCCGGCAGCTGCGGG GATGGGATGACATTTGTCATCTCCTCGACCGCCGACTTCCCGGCCGCCTCTTCGCCGGCG TACCTGGGCCTTGCCAACCCGCACGATGCATCGTCAAACCCTTTCGTCGCCATAGAGCTC GACACCGTCGCAGACCCGGACGCGACGAACGGCAACCATGTCGCCATTGATTTCAACAGC CTGACGTCCAACTTGTCTAGACCTGCAGGGTACATCTACGACGACGAAGGAGCCGTCGGC AACTCTAGCTTTCAGGCGCTCAAGCTTTCCAGCGGCGACCCGATGCAGGCGTGGGTGAGC TACGACGCCGGAGCAGCCCGGCTCGACGTCACGCTTGCGCTCGTCCCCATGTTCATGCCC TCCGTGCCGCTACTGTCTTACAACGTCAGCCTCTCGCGATTGCTGTCGGCGGCCGACGAT TCTCCCATGGCGACCAAAGCATATTTCGGCTTCACCGCTTCGACGGGTGGTGATCCCGGT GGCGCTGGCGCCACCCATCAAGTTCTTGGCTGGAGCTTTAGCAACGGTGGATTGCCACTC GACTACTCGCTGCTGCCCCTGAAACGAGCTCATCAGGGTCAGGATTATAGCAGAAGTAGA CGAGCCAACAGGAAGAGCTTCGTCACATGGTTGCCTGCAGCTGCATCAGTGCTCGCCGTG CTTGCAGCCATGGCAGCGTGTCTTGTGCTCCGGTGGTGCTGGAAGAAGAACGCCCGGAGT CGGGAAAACTGGGAAGCAGAGCTGGGACCTCGCCGCTTCGCTTACCGAGACCTCCGCCGC GCCACCGACGGGTTCAAGCATCTGCTGGGGAAGGGTGGCTTTGGCCGCGTCTACGGAGGC GTTCTCTCCGCGTCCGGCATGCCCATCGCCGTCAAGCGTGTCTCGTCTGAGTCCAGGCAT GGTATGACGCAATTCACGGCCGAGATCATCATCCTCGGCCGCCTCCGCCACCGCAACCTC GTTCGCCTCCTCGGCTACTGCCGCCACAAGGAGGAGCTGCTGCTGGTCTACGAGCACATG CCCAACGGCAGCCTAGATAAGTACTTGCACGAGCACACGTACTCCAGCAACTGCAGGACG CTGGGTTGGCCTCAGAGGCTTCACGTCATCAAGTGCGTCGCGGCGGGGCTGCTCTACCTG CACGACGACTGGGAGCAGGTCATCGTCCACCGCGACGTCAAGGCCAGCAACGTGCTCCTC GACGCCGACATGAACGGCCGCCTGGGCGACTTCGGCCTCGCGCGGCTGCACGACCACGGC GCCGACGCGCACACCACCCACGTCGCCGGCACCAGGGGCTACCTCGCCCCGGAGCTCACC AGGTTCGGCAAGGCCACCAAGGCCACCGACGTGTTCGCGTTCGGCGCCTTCGTCCTCGAG GTGGCGTGCGGGCGCCGGCCGATGGGGCACAACGCCCGCGGCGAGCTGCTCGTGCTCGTC GAGTGGGTGCGCGACGCGTGGGCGGCGGGCGGCGGCGGCTCCGTCGTCGACACCATGGAC CCGAGGCTGGAGGAGTACTCCGGCGAGGAGGCGGAGCTGGTGCTCAAGCTCGGGCTGCTC TGCTCGCACCCGCTCCCCGCCGCGAGGCCCGGTATGCGCCTCGTCATGCAGTACCTCGAC GGCGACGTGCCGCTGCCGGAGTTCTCGCCGGATTATCTCTGCATCAAAGACGTCGACCAG GTCCAAGTTGGAGACTACTCTCCCTCGGTGGTCACCACGATCACAGGTCTGTCCGGAGGA AGATGACGGCCAATTTAGGCGCCACCATGCCTCATCCTTGACCACGCTACATACTTACAT AGTAGGCAAAAGTAATGCATGGTTCCTAAAGGTGAGATGGATGGGTAGCTAGTAAGTTTT CTTCTTCGTTTGTGTTCAAATGTTCTTTAAAGTTGTTGGATTTCTTACATGAGATTTGCT TCGGT