Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0129300-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:1523654:1524512:1 gene:Os07g0129300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGEN RESPONSE GENE 1, PATHOGENESIS-RELATED 1a description:Similar to PR1a protein. (Os07t0129300-00)
Sequence

ATGGCAACCTCCAGCTTGCTAGTAGCTGCAGTGCTCGCGGCGGCGGCCATGGCGGCGACG
GCGCAGAACTCGGCGCAGGACTACGTGGACGCGCACAACGCGGCGAGGTCCGACGTCGGG
GTGGGGCCGGTGAGCTGGGACGACACGGTGGCGGCGTACGCGGAGAGCTACGCGGCGCAG
CGGCAGGGCGACTGCGCGCTGGAGCACTCGGACTCCGGCGGGAAGTACGGCGAGAACATC
TTCTGGGGCTCCGCCGGCGGGGACTGGACGGCGGCGAGCGCGGTGTCGTCGTGGGTGGCG
GAGAAGCAGTGGTACGACCACGACAGCAACAGCTGCTCGGCGCCGGCGGGGAGCTCGTGC
GGGCACTACACGCAGGTGGTGTGGAGCAACTCGACGGCGATCGGCTGCGCCCGCGTCGTC
TGCGACAACAGCCTCGGCGTCTTCATCACCTGCAACTACTCGCCGCCGGGCAACGTCGAC
GGCGAATCTCCCTACTAG

Peptide Sequence

PEP ID

Os07t0129300-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:1523654:1524512:1 gene:Os07g0129300 transcript:Os07t0129300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGEN RESPONSE GENE 1, PATHOGENESIS-RELATED 1a description:Similar to PR1a protein. (Os07t0129300-00)
Sequence

MATSSLLVAAVLAAAAMAATAQNSAQDYVDAHNAARSDVGVGPVSWDDTVAAYAESYAAQ
RQGDCALEHSDSGGKYGENIFWGSAGGDWTAASAVSSWVAEKQWYDHDSNSCSAPAGSSC
GHYTQVVWSNSTAIGCARVVCDNSLGVFITCNYSPPGNVDGESPY

Transcript Sequence

Transcript ID

Os07t0129300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:1523654:1524512:1 gene:Os07g0129300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGEN RESPONSE GENE 1, PATHOGENESIS-RELATED 1a description:Similar to PR1a protein. (Os07t0129300-00)
Sequence

ACACCAGCAACAAGCTAATCATACATACATACAAATCAATTCCCTTTTTAATTAGCAATT
AGAGAGCTTAATTAATTTTGCATCGAAAATGGCAACCTCCAGCTTGCTAGTAGCTGCAGT
GCTCGCGGCGGCGGCCATGGCGGCGACGGCGCAGAACTCGGCGCAGGACTACGTGGACGC
GCACAACGCGGCGAGGTCCGACGTCGGGGTGGGGCCGGTGAGCTGGGACGACACGGTGGC
GGCGTACGCGGAGAGCTACGCGGCGCAGCGGCAGGGCGACTGCGCGCTGGAGCACTCGGA
CTCCGGCGGGAAGTACGGCGAGAACATCTTCTGGGGCTCCGCCGGCGGGGACTGGACGGC
GGCGAGCGCGGTGTCGTCGTGGGTGGCGGAGAAGCAGTGGTACGACCACGACAGCAACAG
CTGCTCGGCGCCGGCGGGGAGCTCGTGCGGGCACTACACGCAGGTGGTGTGGAGCAACTC
GACGGCGATCGGCTGCGCCCGCGTCGTCTGCGACAACAGCCTCGGCGTCTTCATCACCTG
CAACTACTCGCCGCCGGGCAACGTCGACGGCGAATCTCCCTACTAGCTACTAGTAAGTAT
ACGTACGGCTACTTTATATACTACTATCGTACGCTGATCCGGCCAGCGCTGCAGGAGGAC
TACGTACGTACGTGTACGTAGTAAGTAGTCCTTGTTTTTACTGTATTTTACAATATTTTT
ACACACACAGTTCGCATGCTTAATTATACGTGGATGTACGTATAAGCATGTGTGCGTGTA
TATATATATATATATGAGTGTTTGTACTTGTGCCGGTGGGAATAAAGCCGTCAGCCGTAC
GTGCGTGATAT