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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0128800-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:1500540:1501058:1 gene:Os07g0128800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PR1a protein. (Os07t0128800-00)
Sequence

ATGGCGTGGTCATCATCAAGAAGCCCAGTAGCGTGGCTGTCACTCGCTGCAGTTCTTGCG
CTGGCGGCGGCGCCGTCCATGGCGCAGAACTCGCCGCAGGACTTCGTGAGCCCGCACAAC
GCGGCGAGGGCCAACGTCAGCGCGGCGGCGGCGGCGTGGAACGACACGGTGGCGGCGTAC
GCGCAGAGCTACGCGGCGCAGCGGCAGGGCGACTGCAAGCTGGTCCACTCGGACTCCGGC
GGGAGGTACGGCGAGAACCTCTTCTGGGGCTCCGCCGGCGGAAACTGGACGGCGGCGAGC
GCCGTGTCGGCGTGGGTGTCGGAGAAGCAGTGGTACAACCACACCAGCAACAGCTGCTCG
GCGCCGTCGGGGCAGTCGTGCGGGCACTACACGCAGGTGGTGTGGCGCAGCTCGACGGCG
ATCGGATGCGCCCGCGTCGTGTGCAACGGCAGCCTCGGCGTGTTCATCACCTGCAACTAC
TCGCCGCCGGGCAACTACATTGGCCAATCCCCCTACTAA

Peptide Sequence

PEP ID

Os07t0128800-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:1500540:1501058:1 gene:Os07g0128800 transcript:Os07t0128800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PR1a protein. (Os07t0128800-00)
Sequence

MAWSSSRSPVAWLSLAAVLALAAAPSMAQNSPQDFVSPHNAARANVSAAAAAWNDTVAAY
AQSYAAQRQGDCKLVHSDSGGRYGENLFWGSAGGNWTAASAVSAWVSEKQWYNHTSNSCS
APSGQSCGHYTQVVWRSSTAIGCARVVCNGSLGVFITCNYSPPGNYIGQSPY

Transcript Sequence

Transcript ID

Os07t0128800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:1500540:1501058:1 gene:Os07g0128800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PR1a protein. (Os07t0128800-00)
Sequence

ATGGCGTGGTCATCATCAAGAAGCCCAGTAGCGTGGCTGTCACTCGCTGCAGTTCTTGCG
CTGGCGGCGGCGCCGTCCATGGCGCAGAACTCGCCGCAGGACTTCGTGAGCCCGCACAAC
GCGGCGAGGGCCAACGTCAGCGCGGCGGCGGCGGCGTGGAACGACACGGTGGCGGCGTAC
GCGCAGAGCTACGCGGCGCAGCGGCAGGGCGACTGCAAGCTGGTCCACTCGGACTCCGGC
GGGAGGTACGGCGAGAACCTCTTCTGGGGCTCCGCCGGCGGAAACTGGACGGCGGCGAGC
GCCGTGTCGGCGTGGGTGTCGGAGAAGCAGTGGTACAACCACACCAGCAACAGCTGCTCG
GCGCCGTCGGGGCAGTCGTGCGGGCACTACACGCAGGTGGTGTGGCGCAGCTCGACGGCG
ATCGGATGCGCCCGCGTCGTGTGCAACGGCAGCCTCGGCGTGTTCATCACCTGCAACTAC
TCGCCGCCGGGCAACTACATTGGCCAATCCCCCTACTAA