Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0127600-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:1437292:1438147:1 gene:Os07g0127600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 1-73 description:Allergen V5/Tpx-1 related family protein. (Os07t0127600-01)
Sequence

ATGGAGAGAGGAGCGAGCTTTGCAGTGGTGATGGCGGCCATGGCGGTGGTTCTGGCCACC
ACATCGACGGCGCAGGCCCAGACCACGGCGACCGACATCGTCAACATCCACAACGCCGCC
CGGAGCGCCGTCGGCGTCCCGGCGCTGTCGTGGGACGACAACCTGGCGGCGTACGCGCAG
GGCTACGCGAACCAGCGCGCCGGCGACTGCGCGCTGCGGCACTCCGATCGCAACAACTAT
CAGTACGGCGAGAACCTGTCGTGGAACCCCTCCGTGCAGGCGTGGACGGCGGCGAGCTCC
GTCGACCAGTGGGTGGCGGAGAAGGGCTCCTACGACTACGCCAGCAACAGCTGCGTCGGC
GGCGCCATGTGCGGCCACTACACGCAGGTCGTGTGGCGCGACACCACCGCCGTCGGATGC
GCCGCCGTCGCCTGCAACGCCAACCGAGGCGTCTTCTTCATCTGCACCTACTTCCCCGCC
GGCAACGTCCAAAACCAGAGGCCGTACTAG

Peptide Sequence

PEP ID

Os07t0127600-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:1437292:1438147:1 gene:Os07g0127600 transcript:Os07t0127600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 1-73 description:Allergen V5/Tpx-1 related family protein. (Os07t0127600-01)
Sequence

MERGASFAVVMAAMAVVLATTSTAQAQTTATDIVNIHNAARSAVGVPALSWDDNLAAYAQ
GYANQRAGDCALRHSDRNNYQYGENLSWNPSVQAWTAASSVDQWVAEKGSYDYASNSCVG
GAMCGHYTQVVWRDTTAVGCAAVACNANRGVFFICTYFPAGNVQNQRPY

Transcript Sequence

Transcript ID

Os07t0127600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:1437292:1438147:1 gene:Os07g0127600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 1-73 description:Allergen V5/Tpx-1 related family protein. (Os07t0127600-01)
Sequence

ATCACCTCTACTAGCTAGCTATAGCTCTAGTTCTACTCTAATTGCGCAGTCGATCGAACG
TACACTGCCAATCAAATCAACTGCGAGCTTGCAATGGAGAGAGGAGCGAGCTTTGCAGTG
GTGATGGCGGCCATGGCGGTGGTTCTGGCCACCACATCGACGGCGCAGGCCCAGACCACG
GCGACCGACATCGTCAACATCCACAACGCCGCCCGGAGCGCCGTCGGCGTCCCGGCGCTG
TCGTGGGACGACAACCTGGCGGCGTACGCGCAGGGCTACGCGAACCAGCGCGCCGGCGAC
TGCGCGCTGCGGCACTCCGATCGCAACAACTATCAGTACGGCGAGAACCTGTCGTGGAAC
CCCTCCGTGCAGGCGTGGACGGCGGCGAGCTCCGTCGACCAGTGGGTGGCGGAGAAGGGC
TCCTACGACTACGCCAGCAACAGCTGCGTCGGCGGCGCCATGTGCGGCCACTACACGCAG
GTCGTGTGGCGCGACACCACCGCCGTCGGATGCGCCGCCGTCGCCTGCAACGCCAACCGA
GGCGTCTTCTTCATCTGCACCTACTTCCCCGCCGGCAACGTCCAAAACCAGAGGCCGTAC
TAGCTACCGTATACGTATACGTACGTAACGTATTACGTATATGCTATGGTATATATATTT
TGCTACTATACTTATATATTGTTTGTACGTAATCGATCTATAGATATATATGCGCATATA
TGTGCGAACTATATTATATATGTATGTTCGTATGTATGTATGCATATCTGCATGCGTATA
TAAGTGTGTGTCGGATGGAATAAGTACATCATGATGCAAGCGTATTGAGTATATCTATAC
AGATACAAATATATGT