Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0126500-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:1401708:1402384:1 gene:Os07g0126500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allergen V5/Tpx-1 related family protein. (Os07t0126500-00)
Sequence

ATGGCGTCGAAAGCCTTTGCACTCGTGCTGCTGGCGGCGGCGACGCTGGCCATGGCGGCC
AGCACGGCGGCGGCGCAGAGCTCGCCGCAGGACTTCGTCGACGCCCACAACGACGCCCGC
CGCGGCGAGGGCGTCGGCCTCCCCGACGTGGTGTGGAACACGACGCTGCAGGCGTTCGCG
GAGAGCTACGTGGCGGTGCTCGCCGCCACCTGCAGCCTCGACCACTCGAACAGCGTGCAG
CTGGGCTACGGCGAGAACCTGTACATGGGCGGCGCCGGCAGCGCGTCGACGGCGGCGGAC
GCGGTCGGCTTGTGGATGGAGGAGAAGGCGGACTACGTGTACAGCAGCAACACGTGCACG
AGGGGGGCGCTGCTCGACTGCGGCCACTACACGCAGGTGGTGTGGCGGAGCACGACGTCG
ATCGGCTGCGCGCGCGCCGCCTGCAGCAACGGCGGCGGTGTCATCATCAGCTGCAACTAT
TTCCCGCCCGGCAACTTCCCCGATCAGCGCCCTTACTAG

Peptide Sequence

PEP ID

Os07t0126500-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:1401708:1402384:1 gene:Os07g0126500 transcript:Os07t0126500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allergen V5/Tpx-1 related family protein. (Os07t0126500-00)
Sequence

MASKAFALVLLAAATLAMAASTAAAQSSPQDFVDAHNDARRGEGVGLPDVVWNTTLQAFA
ESYVAVLAATCSLDHSNSVQLGYGENLYMGGAGSASTAADAVGLWMEEKADYVYSSNTCT
RGALLDCGHYTQVVWRSTTSIGCARAACSNGGGVIISCNYFPPGNFPDQRPY

Transcript Sequence

Transcript ID

Os07t0126500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:1401708:1402384:1 gene:Os07g0126500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allergen V5/Tpx-1 related family protein. (Os07t0126500-00)
Sequence

ATGGCGTCGAAAGCCTTTGCACTCGTGCTGCTGGCGGCGGCGACGCTGGCCATGGCGGCC
AGCACGGCGGCGGCGCAGAGCTCGCCGCAGGACTTCGTCGACGCCCACAACGACGCCCGC
CGCGGCGAGGGCGTCGGCCTCCCCGACGTGGTGTGGAACACGACGCTGCAGGCGTTCGCG
GAGAGCTACGTGGCGGTGCTCGCCGCCACCTGCAGCCTCGACCACTCGAACAGCGTGCAG
CTGGGCTACGGCGAGAACCTGTACATGGGCGGCGCCGGCAGCGCGTCGACGGCGGCGGAC
GCGGTCGGCTTGTGGATGGAGGAGAAGGCGGACTACGTGTACAGCAGCAACACGTGCACG
AGGGGGGCGCTGCTCGACTGCGGCCACTACACGCAGGTGGTGTGGCGGAGCACGACGTCG
ATCGGCTGCGCGCGCGCCGCCTGCAGCAACGGCGGCGGTGTCATCATCAGCTGCAACTAT
TTCCCGCCCGGCAACTTCCCCGATCAGCGCCCTTACTAGTACACTATACTTACTACTACA
TGAATGTACGCATCAGATATATATTTATATGAATAAATTAATCACGTTCATGTATGTATA
ACATATACAGTACCATATTCGTACTTACTATAATAAGTAAGGCAAATTTTTCTACGCGGC
ATCGCAGTTGTGTGGTT