Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0126301-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:1385340:1386095:1 gene:Os07g0126301 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allergen V5/Tpx-1 related family protein. (Os07t0126301-01)
Sequence

ATGGAGACACCAAAGATATCGGGAGTAGCACTTGCGGCAGCCATTGCCGTCGTTCTGGCC
ATGGCGACCACGCCGGCGGTGGCGCAGAACTCGCCGCAGGACTTCGTGGACCTCCACAAC
GCGGCGCGACGCGTGGAGGGCGTCGGCGAGGTGGTCTGGGACGACGCCGTGGCGGCGTAC
GCGGAGAACTACGCGGCGGAGCGCGCCGGCGACTGCGCGCTCATCCACTCCGGCAGCTGG
GAGAAGGCCGGCTACGGCGAGAACCTCTTCGGAGGCTCCGGCAGCGAGTGGACGGCAGCG
GACGCCGTCAACAGCTGGGTGGGGGAGAAGGATCTGTACGACTACGACAGCAACAGCTGC
CTGGGGTCGTGGGACTCGTGCCTCCACTACACGCAGGTGATGTGGAGCCGCACGACGGCG
ATCGGCTGCGCCCGCGTGGACTGCGACAACGGCGGCGTCTTCATCACCTGCAACTACAAC
CCCGCCGGCAACTTCCAGGGAGAGCGCCCCTTCGAGCGTGGCCTCACTCTCTCTGCTTAA

Peptide Sequence

PEP ID

Os07t0126301-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:1385340:1386095:1 gene:Os07g0126301 transcript:Os07t0126301-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allergen V5/Tpx-1 related family protein. (Os07t0126301-01)
Sequence

METPKISGVALAAAIAVVLAMATTPAVAQNSPQDFVDLHNAARRVEGVGEVVWDDAVAAY
AENYAAERAGDCALIHSGSWEKAGYGENLFGGSGSEWTAADAVNSWVGEKDLYDYDSNSC
LGSWDSCLHYTQVMWSRTTAIGCARVDCDNGGVFITCNYNPAGNFQGERPFERGLTLSA

Transcript Sequence

Transcript ID

Os07t0126301-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:1385340:1386095:1 gene:Os07g0126301 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allergen V5/Tpx-1 related family protein. (Os07t0126301-01)
Sequence

ATCGCATCAGCATTCAACGAACACACACACAATCGGAATCGATTAAGAGAGCAAATTGTG
TAGTAGTGTTGCATATGGAGACACCAAAGATATCGGGAGTAGCACTTGCGGCAGCCATTG
CCGTCGTTCTGGCCATGGCGACCACGCCGGCGGTGGCGCAGAACTCGCCGCAGGACTTCG
TGGACCTCCACAACGCGGCGCGACGCGTGGAGGGCGTCGGCGAGGTGGTCTGGGACGACG
CCGTGGCGGCGTACGCGGAGAACTACGCGGCGGAGCGCGCCGGCGACTGCGCGCTCATCC
ACTCCGGCAGCTGGGAGAAGGCCGGCTACGGCGAGAACCTCTTCGGAGGCTCCGGCAGCG
AGTGGACGGCAGCGGACGCCGTCAACAGCTGGGTGGGGGAGAAGGATCTGTACGACTACG
ACAGCAACAGCTGCCTGGGGTCGTGGGACTCGTGCCTCCACTACACGCAGGTGATGTGGA
GCCGCACGACGGCGATCGGCTGCGCCCGCGTGGACTGCGACAACGGCGGCGTCTTCATCA
CCTGCAACTACAACCCCGCCGGCAACTTCCAGGGAGAGCGCCCCTTCGAGCGTGGCCTCA
CTCTCTCTGCTTAATAAGTTATTAATACAGTATTTACTTTAACTATGTATGGAGTATGAT
ATAAATGTGCGAAATAATAATTACGGGGATCTTATTATATATATATGTACGTTGTCGTTC
GAATAAAAGAAGAAAATAAATGAGAAAATTAATTCC