Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0123500-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:1213610:1217544:-1 gene:Os07g0123500 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ fold domain containing protein. (Os07t0123500-01)
Sequence

ATGGAAGAATTCAGGTTTGGAAGGCTTGATGGTCAGCCAGCAAAGATCAGAAATGTCCCC
ATTGCTGTCACACCTGAAGGATTCTGGTGCTGCCCGTCGCAGGCCATCCTCCAGAAGTCG
ATGAAGAACCAAAATCAGCATGCCAGACCAAAGGGAGGAGCATCCCCATCTGTGTCCAAG
GCATCCTCAGTTCAGAGGACTCCAACTATTTCTTTGGAGAAAAGAACACACTCTACTCCT
ACTAGGTCTAGAACCAATTCAGATGAGCAGGTACTGCCTCCAGCAGATGATGCTATCCCT
GATCAACCAAAGGTATCACCAGTGCCAGACAAGAGACATAATAAGCAACACAAGATATCG
GTCGGATTCGGTCAGCTTCACACGAGTGATTTGAAGGTTATGCTTTATGGCAGGGAAGGG
GTTGCTGTAAAAATGATTGTTCACAAGAACATCCTTGCTGAAAATAGTACTTTCTTTGCT
GATAAGCTCTCTAGGCAATCTCCAGTGTCATGCATTGAGGTATCGGATTGCGAGGATGTG
GAGATTTTTGTTGAGACTGTTGGGTTGATGTATTGCAAGGATGTTAAGCAGAGACTGATC
AAGCAAGCTGTTGCGCGGGTTCTTCGAATCTTGAAGGTTGCAGAATCACTAGGTTTCCCA
ACATGCATCATGTCATGCTTAAATTATTTGGAAGCAGTGCCTTGGGTTGGTGATGAGGAA
GAAAATGTGTTATCATCGATACGGCAACTTCACTGTGAGAATTATGGAGTTAGCCCCCTC
CTGAAAAGAGTAGCATCTGACCTAACAAATCCACCTAGTGACACCCTTGCACATATCATT
GAGTTGGTGCTGAAAAGCAGCGATGACAGAGGGCGGCGCGAGATGAAATCTTTGGTCCTG
AAGCTTTTGAAGGAGAATAACATCTGGACCAACGGTTCATCGGATTCCTGTGTAGTGACA
TTCTACAGTTCTTGCCGGAATTGCTTGGAATCACTATCGAACTTGTTTCGCCAAGCTTCT
GAACCTGAATTTTCTGAGCAATCTTCAGACAGTAAAGAGGTGATCTTTAGACAGATCACT
CTAGAGGCTGATAACCTCCTCTGGTTAGCTGAGATCTTAGCTGACAGAAATGCAGCTGAT
GAGCTGACATCAATTTGGGCAAGCCAGGGAGAGCTGGCCAAGCTGCATTGCAGGATACCA
GTGATGCACCGGCATCTCATCAGCTGTGTCACTGCAAGGCTCTTCGTCGCGGTAGGGAAA
GGCGAGGCGTTACCGTCTAAGGAGACGAGGCAGCTCCTCCTTGATGTGTGGCTCCAGCCT
CTGATGGATGATTACAACTGGTTGCAGCATGGCTGCAGGTGGTTTGATCGGAAGGTCATC
GAGGAAGGGATAGGGCAGACCATCCTGACGCTGCCATTGGAGGATCAGCAGAGCATTCTG
CTCACCTGGCTTGGAAGATTTCTCAAGGTTGGAGATAGCTGCCCAAATCTTCAGAGAGCA
TTCGAGGTGTGGTGGAGGAGAACCTTTGTCAGGCCTTACACTGATCAGCAAGCGAGTTCT
TCGTCGCAATCGCGATGGAGCTGA

Peptide Sequence

PEP ID

Os07t0123500-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:1213610:1217544:-1 gene:Os07g0123500 transcript:Os07t0123500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ fold domain containing protein. (Os07t0123500-01)
Sequence

MEEFRFGRLDGQPAKIRNVPIAVTPEGFWCCPSQAILQKSMKNQNQHARPKGGASPSVSK
ASSVQRTPTISLEKRTHSTPTRSRTNSDEQVLPPADDAIPDQPKVSPVPDKRHNKQHKIS
VGFGQLHTSDLKVMLYGREGVAVKMIVHKNILAENSTFFADKLSRQSPVSCIEVSDCEDV
EIFVETVGLMYCKDVKQRLIKQAVARVLRILKVAESLGFPTCIMSCLNYLEAVPWVGDEE
ENVLSSIRQLHCENYGVSPLLKRVASDLTNPPSDTLAHIIELVLKSSDDRGRREMKSLVL
KLLKENNIWTNGSSDSCVVTFYSSCRNCLESLSNLFRQASEPEFSEQSSDSKEVIFRQIT
LEADNLLWLAEILADRNAADELTSIWASQGELAKLHCRIPVMHRHLISCVTARLFVAVGK
GEALPSKETRQLLLDVWLQPLMDDYNWLQHGCRWFDRKVIEEGIGQTILTLPLEDQQSIL
LTWLGRFLKVGDSCPNLQRAFEVWWRRTFVRPYTDQQASSSSQSRWS

Transcript Sequence

Transcript ID

Os07t0123500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:1213610:1217544:-1 gene:Os07g0123500 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ fold domain containing protein. (Os07t0123500-01)
Sequence

GGTGCTCTTTACTTTGCCCTTCTTGGCTTCTTGCTTGCTTGCTTGCTTCTCCTCTTTGCC
ACCAGCTCTGGGAAGAAGAATGGTGTGTGTGATTGTGAGGCTGCCCTTCTTCTTGAATCT
TGATTGATTGTTTGGTGCAGCATGAGCAAGGTTGTAATGTGAGGGGTGTGCAATAGTGCC
AATCATAAGGTCAAAAGAAGATCACATAGTTGTTAAAAAACTTTCTGAATCAATCTTCTC
TGAAGATACAGGCTTCTTCTGAAGACAAGCATGGAAGAATTCAGGTTTGGAAGGCTTGAT
GGTCAGCCAGCAAAGATCAGAAATGTCCCCATTGCTGTCACACCTGAAGGATTCTGGTGC
TGCCCGTCGCAGGCCATCCTCCAGAAGTCGATGAAGAACCAAAATCAGCATGCCAGACCA
AAGGGAGGAGCATCCCCATCTGTGTCCAAGGCATCCTCAGTTCAGAGGACTCCAACTATT
TCTTTGGAGAAAAGAACACACTCTACTCCTACTAGGTCTAGAACCAATTCAGATGAGCAG
GTACTGCCTCCAGCAGATGATGCTATCCCTGATCAACCAAAGGTATCACCAGTGCCAGAC
AAGAGACATAATAAGCAACACAAGATATCGGTCGGATTCGGTCAGCTTCACACGAGTGAT
TTGAAGGTTATGCTTTATGGCAGGGAAGGGGTTGCTGTAAAAATGATTGTTCACAAGAAC
ATCCTTGCTGAAAATAGTACTTTCTTTGCTGATAAGCTCTCTAGGCAATCTCCAGTGTCA
TGCATTGAGGTATCGGATTGCGAGGATGTGGAGATTTTTGTTGAGACTGTTGGGTTGATG
TATTGCAAGGATGTTAAGCAGAGACTGATCAAGCAAGCTGTTGCGCGGGTTCTTCGAATC
TTGAAGGTTGCAGAATCACTAGGTTTCCCAACATGCATCATGTCATGCTTAAATTATTTG
GAAGCAGTGCCTTGGGTTGGTGATGAGGAAGAAAATGTGTTATCATCGATACGGCAACTT
CACTGTGAGAATTATGGAGTTAGCCCCCTCCTGAAAAGAGTAGCATCTGACCTAACAAAT
CCACCTAGTGACACCCTTGCACATATCATTGAGTTGGTGCTGAAAAGCAGCGATGACAGA
GGGCGGCGCGAGATGAAATCTTTGGTCCTGAAGCTTTTGAAGGAGAATAACATCTGGACC
AACGGTTCATCGGATTCCTGTGTAGTGACATTCTACAGTTCTTGCCGGAATTGCTTGGAA
TCACTATCGAACTTGTTTCGCCAAGCTTCTGAACCTGAATTTTCTGAGCAATCTTCAGAC
AGTAAAGAGGTGATCTTTAGACAGATCACTCTAGAGGCTGATAACCTCCTCTGGTTAGCT
GAGATCTTAGCTGACAGAAATGCAGCTGATGAGCTGACATCAATTTGGGCAAGCCAGGGA
GAGCTGGCCAAGCTGCATTGCAGGATACCAGTGATGCACCGGCATCTCATCAGCTGTGTC
ACTGCAAGGCTCTTCGTCGCGGTAGGGAAAGGCGAGGCGTTACCGTCTAAGGAGACGAGG
CAGCTCCTCCTTGATGTGTGGCTCCAGCCTCTGATGGATGATTACAACTGGTTGCAGCAT
GGCTGCAGGTGGTTTGATCGGAAGGTCATCGAGGAAGGGATAGGGCAGACCATCCTGACG
CTGCCATTGGAGGATCAGCAGAGCATTCTGCTCACCTGGCTTGGAAGATTTCTCAAGGTT
GGAGATAGCTGCCCAAATCTTCAGAGAGCATTCGAGGTGTGGTGGAGGAGAACCTTTGTC
AGGCCTTACACTGATCAGCAAGCGAGTTCTTCGTCGCAATCGCGATGGAGCTGATGAAAA
ATGGAGGGTGATGTTGCTTACACGTTGCATAATATGTGTAAGAACTTGGTGGTATTGTTA
GTTAGGAGAACATCAGTAAGGGAAGAAGAAAAATTGTGTAGGATTAGTAGTAGTGCAGGT
GCTCTTTTAACTGAACTGAGGGTGTGTGTGCTGAATTGCTGATTGTTCTTGTGTTGTAAT
GCCTTGAAATGTGACAGCTCTCTGATTTCTTTGTTACAGGAATAAATCCTGTATGATTTA
CT