Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0122000-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:1150138:1152196:1 gene:Os07g0122000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1719, Oryza sativa family protein. (Os07t0122000-01)
Sequence	ATGGAAGAGATAGTCGGTTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGG TTGATTGACCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATG GCACAAATCAAGTTGGAGTTCGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGC CCGTTGTTACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTA CGGAAGTGCAGGCAACATATCCAGGAAGAAGATGAGGTGGAACAACAAGTAAGGAATTCT TCCTTTCCTAGGCGAATTGCCCATGCCACCAAGACACTGGTATCTTCCATCTTTCACAGC AATAGTGATGAGCTGGGTAGATCTTCTGTCCAAAGATTCGAGTGGTTTGCAGATGGAGCT AATGATTTTCTAAGATCTGTGGAATTTGGAGGCACACCACGCCGTTACTTGTTCTTTGAC CCTCTTATCGGGCACCTTATTTCAGGTGAAACGTTAGAGTACAAATCAATACAGGGAAAC AAGCAGCATTGGTTTTGGGTACGGCCCAATAACTCTGCAGAGCGAGGAATAGAAGCTAAG TTGTTCTTTGCTTTCAATGATGGCAGTGCACCTGAGGACAACTTTTACATTGATATTATT CTACAACTTTCAGAGAGTACAAACATAGTTGGTACTACAATTAAGTGCTTGCAGTTGTTT ACTCCTTATTTTGAGTCTACAGCTGAAACTGTTAGGAAAGAACTTATTCAACTACCTACA CAAGACTTCTCCAGGGTGTCACATTCTCACTCATACGGTTGGGAGAACATTCATAGTATA GCTACTGAATGGTTCCGCCCAAATCCACTGTGTTGCAAGCATCATGGTCAGAAAGTATGT GGTAGTGGGAACTTGCACAAGGTAGAATTAACAGATATTTCTCTAGAACCCATCATTGAA GTGAGTTTACTGTGCCAAGTTTCACCTCCTGGGTTCAGAGAACAGGGAACAATTGTTGAG GGTAAATCTTCACTTAAAGAATTTCCGCATCTGAATGTTATCCTTGTCTATACGCCCCAT GGCTCTTCAGAAGACCTATTCCCAGCAGTTGATAGTACTGTGATTGAGGTGATTAATGGT AACGAGCAACATTGCTTGCACACAAATGTTCATGCTGCCAAGGGCTGTAGATTGTTTTCG TCAGAATGCAAAAGCAACAGCGTATCAGATGCTTTGGAAGTCTAA

Peptide Sequence

PEP ID	Os07t0122000-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:1150138:1152196:1 gene:Os07g0122000 transcript:Os07t0122000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1719, Oryza sativa family protein. (Os07t0122000-01)
Sequence	MEEIVGSAIVQETVNRIISGLIDRCERKSSARDHLERLEMAQIKLEFALETSNKWQITSG PLLRWQKKLKRATEECDDTLRKCRQHIQEEDEVEQQVRNSSFPRRIAHATKTLVSSIFHS NSDELGRSSVQRFEWFADGANDFLRSVEFGGTPRRYLFFDPLIGHLISGETLEYKSIQGN KQHWFWVRPNNSAERGIEAKLFFAFNDGSAPEDNFYIDIILQLSESTNIVGTTIKCLQLF TPYFESTAETVRKELIQLPTQDFSRVSHSHSYGWENIHSIATEWFRPNPLCCKHHGQKVC GSGNLHKVELTDISLEPIIEVSLLCQVSPPGFREQGTIVEGKSSLKEFPHLNVILVYTPH GSSEDLFPAVDSTVIEVINGNEQHCLHTNVHAAKGCRLFSSECKSNSVSDALEV

Transcript Sequence

Transcript ID	Os07t0122000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:1150138:1152196:1 gene:Os07g0122000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1719, Oryza sativa family protein. (Os07t0122000-01)
Sequence	AGCGAAGGCTGACTGGCTGAGTAGAGCTCGAGCATGACTGTACTGGTGGAGCTTGAGCTC TATCTCTACTAAAACCAACTAGCCAGGTATGTGAATCTCAATCTGAAGGTAGAGAGAGTG AGGAAGCAGAGCTGGAAGAAGAACACTAGGTCCTAAGTGTAACATTTTGTAAAAATTACT AGCCCAAAGTGAAAATAATAGCTTGTTCCTAGTCCAAGCTGCGACCATGGGAAGGATTAC TGAAGATGGAAGAGATAGTCGGTTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATAT CTGGGTTGATTGACCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGG AGATGGCACAAATCAAGTTGGAGTTCGCACTTGAGACATCCAATAAATGGCAGATCACTA GTGGCCCGTTGTTACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACA CACTACGGAAGTGCAGGCAACATATCCAGGAAGAAGATGAGGTGGAACAACAAGTAAGGA ATTCTTCCTTTCCTAGGCGAATTGCCCATGCCACCAAGACACTGGTATCTTCCATCTTTC ACAGCAATAGTGATGAGCTGGGTAGATCTTCTGTCCAAAGATTCGAGTGGTTTGCAGATG GAGCTAATGATTTTCTAAGATCTGTGGAATTTGGAGGCACACCACGCCGTTACTTGTTCT TTGACCCTCTTATCGGGCACCTTATTTCAGGTGAAACGTTAGAGTACAAATCAATACAGG GAAACAAGCAGCATTGGTTTTGGGTACGGCCCAATAACTCTGCAGAGCGAGGAATAGAAG CTAAGTTGTTCTTTGCTTTCAATGATGGCAGTGCACCTGAGGACAACTTTTACATTGATA TTATTCTACAACTTTCAGAGAGTACAAACATAGTTGGTACTACAATTAAGTGCTTGCAGT TGTTTACTCCTTATTTTGAGTCTACAGCTGAAACTGTTAGGAAAGAACTTATTCAACTAC CTACACAAGACTTCTCCAGGGTGTCACATTCTCACTCATACGGTTGGGAGAACATTCATA GTATAGCTACTGAATGGTTCCGCCCAAATCCACTGTGTTGCAAGCATCATGGTCAGAAAG TATGTGGTAGTGGGAACTTGCACAAGGTAGAATTAACAGATATTTCTCTAGAACCCATCA TTGAAGTGAGTTTACTGTGCCAAGTTTCACCTCCTGGGTTCAGAGAACAGGGAACAATTG TTGAGGGTAAATCTTCACTTAAAGAATTTCCGCATCTGAATGTTATCCTTGTCTATACGC CCCATGGCTCTTCAGAAGACCTATTCCCAGCAGTTGATAGTACTGTGATTGAGGTGATTA ATGGTAACGAGCAACATTGCTTGCACACAAATGTTCATGCTGCCAAGGGCTGTAGATTGT TTTCGTCAGAATGCAAAAGCAACAGCGTATCAGATGCTTTGGAAGTCTAAACATGGTGGT GCATTTCTTCAGGCTGTGAAGGCAACAATGAACATGCGGAGCACACGGAGAACCATTCGA GGAGCCAGGAAAGCAAAGATGTTGCGACGACATGATCGCCGGACACACAATCACAGACAT GAGGTCGCTGACTTCCTCAGCCTTTGGGCTGTGCATGCACCTGTCCGGCTTCAGGGCTCA CTCCTTGACTGGATTCGGAAGGAGAAGAAAGTAGCAGGTCCTCTACTGACATTTTAGATG ATGTAATAGGGACTAGAAGGGAAACAGGGATAATTAAAATTAAAAGAATGGGGGAGAAAA GTAACATGTAGGGAGTTGGTTTCTAAGTACTTAGGAGTGTATTCATCTGAAATGTTCTAC ATATACTGCTGTTGTTTGTCTCGTCAGTTATGTTGGCAAATGGTGATAACATGATGTTCT TGCCCTAGAAGTCTAATGTACCAGCCTTGCTCATTCGATGTGTCTGGTTTCATTTG