Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0119400-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:1055475:1058127:1 gene:Os07g0119400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE OXIDASE 3 description:Similar to Pectinesterase like protein. (Os07t0119400-01)
Sequence

ATGGCGCCTCCTCCGGCTGCAGCTGCGGCGTTGGCGGCGTGCATTCTCGCCGTCGCCGCC
ACCCTCGCCGGCGCCGACGACCCCTACCGCTTCTTCACCTGGAACGTCACCTACGGCAGC
ATCAACCCTCTCGGCTCCACCCCGCAGCAGGGCATCTTGATCAATGGCCAGTTTCCTGGG
CCGCGAATCGACTGCGTGACGAACGACAACATCATCGTGAACGTGTTCAACAACCTGGAC
GAGCCGTTCCTCCTGACATGGAATGGCATCAAGCAGCGCAAGAACTCGTGGCAGGACGGC
GTGCTGGGCACCAACTGCCCAATCCCCCCTGGCGCCAACTACACCTACAAGTTCCAGGCC
AAGGACCAGATCGGCACCTTCGTCTACTTCCCCTCCGTCGCCATGCACCGCGCCGCCGGC
GGCTTCGGCGCGCTCAACGTCTACCAGCGCCCGGCCATCCCCGTCCCGTACCCGCCGCCC
GCCGGCGACTTCACGCTCCTCGTCGGCGACTGGTACAAGGCCGGGCATAAGCAGCTGAGG
CAGGCGCTCGACGCCGGCGGCGGTGGCGCGCTCCCGCCGCCCGACGCGCTGCTCATCAAT
GGCATGCCGTCGGCGGCGGCGTTCGTCGGCGACCAGGGGAGGACGTACCTGTTCAGGGTG
TCCAATGTCGGGGTGAAGACGTCCGTCAATGTCAGGATCCAGGGGCACTCGCTGAGGTTG
GTGGAGGTGGAGGGGACGCACCCGGTGCAGAACGTGTACGACTCGCTCGACGTCCATGTC
GGCCAGTCGGTGGCGTTCCTCGTCACGCTCGACAAGGCGGCGCAGGACTACGCCGTCGTG
GCGTCCGCGCGGTTCAGCCCGGGCGCGTCGCCGCTGATGGCGACGGGGACGCTGCACTAC
AGCAGCGCCGTGTCCAGGGCGCCCGGCCCGCTCCCGGCGCCGCCGCCGGAGCAGGCGGAG
TGGTCGATGAACCAGGCGAGGTCGTTCCGGTGGAACCTGACGGCGAGCGCGGCGAGGCCC
AACCCGCAGGGGTCGTTCCACTACGGCACCATCGCGACGTCGAGGACGCTGGTGCTCGCC
AACTCCGCGCCGGTGCTCGCCGGGCAGCGCCGGTACGCCGTCAACGGCGTGTCGTTCGTC
GTCCCCGACACGCCGCTCAAGCTCGTGGACAACTACAACATCGCCAATGTCATCGGCTGG
GACAGCGTCCCGGCGAGGCCCGACGGCGCGGCGCCGCGGTCGGGGACGCCGGTGGTGAGG
CTCAACCTGCACGAGTTCATCGAGGTGGTGTTCCAGAACACGGAGAACGAGCTGCAGTCT
TGGCATCTCGATGGATATGACTTCTGGGTTGTTGGGTATGGCAATGGTCAGTGGACTGAG
AATCAGCGGACAACCTACAACTTGGTTGATGCGCAAGCGAGGCATACAGTTCAGGTTTAC
CCGAATGGATGGTCGGCAATCTTGGTGTCATTGGACAACCAGGGGATGTGGAACCTGAGG
TCGGCGAACTGGGACCGGCAATACCTCGGCCAGCAGCTGTACATGAGAGTGTGGACGCCG
CAGCAGAGCTTCTCCAATGAGTACAGTATCCCGACCAACGCCATACTCTGCGGTAGAGCT
GCCGGCCTTGGACACTGA

Peptide Sequence

PEP ID

Os07t0119400-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:1055475:1058127:1 gene:Os07g0119400 transcript:Os07t0119400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE OXIDASE 3 description:Similar to Pectinesterase like protein. (Os07t0119400-01)
Sequence

MAPPPAAAAALAACILAVAATLAGADDPYRFFTWNVTYGSINPLGSTPQQGILINGQFPG
PRIDCVTNDNIIVNVFNNLDEPFLLTWNGIKQRKNSWQDGVLGTNCPIPPGANYTYKFQA
KDQIGTFVYFPSVAMHRAAGGFGALNVYQRPAIPVPYPPPAGDFTLLVGDWYKAGHKQLR
QALDAGGGGALPPPDALLINGMPSAAAFVGDQGRTYLFRVSNVGVKTSVNVRIQGHSLRL
VEVEGTHPVQNVYDSLDVHVGQSVAFLVTLDKAAQDYAVVASARFSPGASPLMATGTLHY
SSAVSRAPGPLPAPPPEQAEWSMNQARSFRWNLTASAARPNPQGSFHYGTIATSRTLVLA
NSAPVLAGQRRYAVNGVSFVVPDTPLKLVDNYNIANVIGWDSVPARPDGAAPRSGTPVVR
LNLHEFIEVVFQNTENELQSWHLDGYDFWVVGYGNGQWTENQRTTYNLVDAQARHTVQVY
PNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILCGRA
AGLGH

Transcript Sequence

Transcript ID

Os07t0119400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:1055475:1058127:1 gene:Os07g0119400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE OXIDASE 3 description:Similar to Pectinesterase like protein. (Os07t0119400-01)
Sequence

GCTCAGCTCTAGATCCAGCAATGGCGCCTCCTCCGGCTGCAGCTGCGGCGTTGGCGGCGT
GCATTCTCGCCGTCGCCGCCACCCTCGCCGGCGCCGACGACCCCTACCGCTTCTTCACCT
GGAACGTCACCTACGGCAGCATCAACCCTCTCGGCTCCACCCCGCAGCAGGGCATCTTGA
TCAATGGCCAGTTTCCTGGGCCGCGAATCGACTGCGTGACGAACGACAACATCATCGTGA
ACGTGTTCAACAACCTGGACGAGCCGTTCCTCCTGACATGGAATGGCATCAAGCAGCGCA
AGAACTCGTGGCAGGACGGCGTGCTGGGCACCAACTGCCCAATCCCCCCTGGCGCCAACT
ACACCTACAAGTTCCAGGCCAAGGACCAGATCGGCACCTTCGTCTACTTCCCCTCCGTCG
CCATGCACCGCGCCGCCGGCGGCTTCGGCGCGCTCAACGTCTACCAGCGCCCGGCCATCC
CCGTCCCGTACCCGCCGCCCGCCGGCGACTTCACGCTCCTCGTCGGCGACTGGTACAAGG
CCGGGCATAAGCAGCTGAGGCAGGCGCTCGACGCCGGCGGCGGTGGCGCGCTCCCGCCGC
CCGACGCGCTGCTCATCAATGGCATGCCGTCGGCGGCGGCGTTCGTCGGCGACCAGGGGA
GGACGTACCTGTTCAGGGTGTCCAATGTCGGGGTGAAGACGTCCGTCAATGTCAGGATCC
AGGGGCACTCGCTGAGGTTGGTGGAGGTGGAGGGGACGCACCCGGTGCAGAACGTGTACG
ACTCGCTCGACGTCCATGTCGGCCAGTCGGTGGCGTTCCTCGTCACGCTCGACAAGGCGG
CGCAGGACTACGCCGTCGTGGCGTCCGCGCGGTTCAGCCCGGGCGCGTCGCCGCTGATGG
CGACGGGGACGCTGCACTACAGCAGCGCCGTGTCCAGGGCGCCCGGCCCGCTCCCGGCGC
CGCCGCCGGAGCAGGCGGAGTGGTCGATGAACCAGGCGAGGTCGTTCCGGTGGAACCTGA
CGGCGAGCGCGGCGAGGCCCAACCCGCAGGGGTCGTTCCACTACGGCACCATCGCGACGT
CGAGGACGCTGGTGCTCGCCAACTCCGCGCCGGTGCTCGCCGGGCAGCGCCGGTACGCCG
TCAACGGCGTGTCGTTCGTCGTCCCCGACACGCCGCTCAAGCTCGTGGACAACTACAACA
TCGCCAATGTCATCGGCTGGGACAGCGTCCCGGCGAGGCCCGACGGCGCGGCGCCGCGGT
CGGGGACGCCGGTGGTGAGGCTCAACCTGCACGAGTTCATCGAGGTGGTGTTCCAGAACA
CGGAGAACGAGCTGCAGTCTTGGCATCTCGATGGATATGACTTCTGGGTTGTTGGGTATG
GCAATGGTCAGTGGACTGAGAATCAGCGGACAACCTACAACTTGGTTGATGCGCAAGCGA
GGCATACAGTTCAGGTTTACCCGAATGGATGGTCGGCAATCTTGGTGTCATTGGACAACC
AGGGGATGTGGAACCTGAGGTCGGCGAACTGGGACCGGCAATACCTCGGCCAGCAGCTGT
ACATGAGAGTGTGGACGCCGCAGCAGAGCTTCTCCAATGAGTACAGTATCCCGACCAACG
CCATACTCTGCGGTAGAGCTGCCGGCCTTGGACACTGAGGAAGATGATGAAGAAGAAATT
CAGAGTTGCATAGTTCGATCCATCCTTCGTCGTTTGGTATATGTCTAGTAGAATAAGTCA
TACTACTACTACTATAGGTGAAAGTGAAGATGAGAATTCAGAATTACGATTTCGGATATA
TGTTTGTTGTAGCTAAAACTGATGTGCTATTCTTTGATCATATGTCAGTGTTTTTCTCTT
GAGTTTGTAGCCTGTGGACAAGGCCTCAGGCTTAATGGTGCAGAGTGCTCTGTTTCTGAT
GCCGCATCAATCTATTATTATGCTATTCAGTGATGTTTTTACG