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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0118250-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:976321:976749:1 gene:Os07g0118250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os07t0118250-00)
Sequence

ATGGCTTCACAGATCGAGAGCCACCGCGCCGGCGCGGAGATCGTCAACGGCGATGACATC
TGCAGGAAGAAGTCCATCGAGCTTCTGGGAGAGCTCGGCCTCCCCATGGGGCTCCTGCCA
TTGGAGGACATCGAGGAGTTCGGCTACAACCGGGAGACCGGGTTCATCTGGATGGTGCAG
AGGAAGAAGAAGATCGAGCACGTCTTCAAGAAGATCAAGCAGAACGTGTCCTACGCCGGT
GAGGTGACGGCGTTCGTCGAGAAGGGGAAGCTGAAGAAGATCACCGGCGTGAAGACCAAG
GAGCTGATGCTCTGGCTCAGCATCGTCGAGGTGTACGCCGCCGAGGCGTCGCCGGAGAAG
GTGACCTTCAAGAGTGGCGCCGGAATCTGCAAGACCTTTGACGCCGCTGCATTTGCACCT
GGGGAGTAA

Peptide Sequence

PEP ID

Os07t0118250-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:976321:976749:1 gene:Os07g0118250 transcript:Os07t0118250-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os07t0118250-00)
Sequence

MASQIESHRAGAEIVNGDDICRKKSIELLGELGLPMGLLPLEDIEEFGYNRETGFIWMVQ
RKKKIEHVFKKIKQNVSYAGEVTAFVEKGKLKKITGVKTKELMLWLSIVEVYAAEASPEK
VTFKSGAGICKTFDAAAFAPGE

Transcript Sequence

Transcript ID

Os07t0118250-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:976321:976749:1 gene:Os07g0118250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os07t0118250-00)
Sequence

ATGGCTTCACAGATCGAGAGCCACCGCGCCGGCGCGGAGATCGTCAACGGCGATGACATC
TGCAGGAAGAAGTCCATCGAGCTTCTGGGAGAGCTCGGCCTCCCCATGGGGCTCCTGCCA
TTGGAGGACATCGAGGAGTTCGGCTACAACCGGGAGACCGGGTTCATCTGGATGGTGCAG
AGGAAGAAGAAGATCGAGCACGTCTTCAAGAAGATCAAGCAGAACGTGTCCTACGCCGGT
GAGGTGACGGCGTTCGTCGAGAAGGGGAAGCTGAAGAAGATCACCGGCGTGAAGACCAAG
GAGCTGATGCTCTGGCTCAGCATCGTCGAGGTGTACGCCGCCGAGGCGTCGCCGGAGAAG
GTGACCTTCAAGAGTGGCGCCGGAATCTGCAAGACCTTTGACGCCGCTGCATTTGCACCT
GGGGAGTAA