Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0116600-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:909597:911056:-1 gene:Os07g0116600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HLS1 (HOOKLESS 1); N-acetyltransferase. (Os07t0116600-00)
Sequence

ATGGCGGTGGCTTGTTTGCCGGAGGACGGCGGCGAGGTGGTCCTGGTGCGGGAGTTCGAC
GGCGGCCGCGACCGTCCCGGCGTCGAACTGGTTGAGCGCGCCTGCGAGGTGGGTCCGAGC
GGCGGCAAGCTCTGCCTCTTCACCGACCTCCTCGGCGACCCGCTCTGCCGCGTCCGCCAC
TCGCCGGCCTACCTCATGCTCGTCGCGGAGGCTGTGGGTGGCCCGCTCGGCACGGAGATC
GTCGGCGTCGTGCGCGGCTGCGTCAAGACCGTGGCGTGCGGGCGCAGCCAGCTCTTCTCC
AAGGTGGCGTACCTGCTCGGCCTCCGGGTCTCGCCGCGCCACCGGCGGCGAGGGATCGGG
AGGAGGCTGGTGGAGAGGATGGAGGAGTGGTTCCGGGAGATGGGCGCCGAGTACGCCTAC
GTCGCCACCGACCGCGACAACGAGCCCTCGGTGCGCCTCTTCACCGGCGCCTGCGGCTAC
GCCAAGTTCCGCACGCCGTCGGTGCTCGTGCACCCGGTGTTCGGCCACGACCTCGCGCCG
TCGCGGCGCGCCGCCGTCGTCCGCCTCGACGCGCGCGAGGCCGAGCTGCTGTACCGCCGC
CGCCTCGGCTCCGTGGAGTTCTTCCCGCGGGACATCGACGCCGTGCTCTCCAACGCCCTG
TCGCTCGGCACGTTCCTGGCCGTGCCGCGCGGGACGCGGTGGCGCGGCGTGGAGGGGTTC
CTGGCCTCGCCGCCGGCGTCGTGGGCGGTGGCCAGCCTGTGGAACTGCAAAGACGCGTTC
CGCCTCGAGGTGCGCGGCGCGCCGCGGCTGTGGCGCGCGGCCGCCCGCGCGACGCGCGCC
GCCGACCGCGCCGCGCCGTGGCTGGGCATCCCGTCCATCCCGAACCTGTTCGAGCCGTTC
GGCCTCCACTTCGTCTACGGCCTCGGCGGCGGCGGCCCCGCGGCGGCGCGCATGGCGCGG
GCGCTGTTCCGGCACGCCCACAACGTGGCGCGGCGCGGCGGGGCGCGCGTGGTGGCCACC
GAGGTGGGCGCGTGCGAGCCGCTCCGCGCCGGCGTGCCGCACTGGCCGCGCCTCGGCGCC
GACGACCTCTGGTGCATCAAGCGGCTGGCCGACGGCTACGGCGACGGCGCGCTCGGCGAC
TGGAGCAAGGCGCCGCCGGGAACCTCCATCTTCGTAGACCCAAGGGAGTTTTAG

Peptide Sequence

PEP ID

Os07t0116600-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:909597:911056:-1 gene:Os07g0116600 transcript:Os07t0116600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HLS1 (HOOKLESS 1); N-acetyltransferase. (Os07t0116600-00)
Sequence

MAVACLPEDGGEVVLVREFDGGRDRPGVELVERACEVGPSGGKLCLFTDLLGDPLCRVRH
SPAYLMLVAEAVGGPLGTEIVGVVRGCVKTVACGRSQLFSKVAYLLGLRVSPRHRRRGIG
RRLVERMEEWFREMGAEYAYVATDRDNEPSVRLFTGACGYAKFRTPSVLVHPVFGHDLAP
SRRAAVVRLDAREAELLYRRRLGSVEFFPRDIDAVLSNALSLGTFLAVPRGTRWRGVEGF
LASPPASWAVASLWNCKDAFRLEVRGAPRLWRAAARATRAADRAAPWLGIPSIPNLFEPF
GLHFVYGLGGGGPAAARMARALFRHAHNVARRGGARVVATEVGACEPLRAGVPHWPRLGA
DDLWCIKRLADGYGDGALGDWSKAPPGTSIFVDPREF

Transcript Sequence

Transcript ID

Os07t0116600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:909597:911056:-1 gene:Os07g0116600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HLS1 (HOOKLESS 1); N-acetyltransferase. (Os07t0116600-00)
Sequence

CCCCCATCCTATCACTCCCCCACTCCTCCACTCGCGCCACTACCTCCATCTCCATCGATC
GCGCGCGCCTTCTCCTCTCCCGCCACTCCATCGCCGCTATAAATTGCAACGCACCGCTCG
ATCGATCAAGAAGAAGAAGGGGATTTGATTGATTGATTGATCGGAGCAAGGATGGCGGTG
GCTTGTTTGCCGGAGGACGGCGGCGAGGTGGTCCTGGTGCGGGAGTTCGACGGCGGCCGC
GACCGTCCCGGCGTCGAACTGGTTGAGCGCGCCTGCGAGGTGGGTCCGAGCGGCGGCAAG
CTCTGCCTCTTCACCGACCTCCTCGGCGACCCGCTCTGCCGCGTCCGCCACTCGCCGGCC
TACCTCATGCTCGTCGCGGAGGCTGTGGGTGGCCCGCTCGGCACGGAGATCGTCGGCGTC
GTGCGCGGCTGCGTCAAGACCGTGGCGTGCGGGCGCAGCCAGCTCTTCTCCAAGGTGGCG
TACCTGCTCGGCCTCCGGGTCTCGCCGCGCCACCGGCGGCGAGGGATCGGGAGGAGGCTG
GTGGAGAGGATGGAGGAGTGGTTCCGGGAGATGGGCGCCGAGTACGCCTACGTCGCCACC
GACCGCGACAACGAGCCCTCGGTGCGCCTCTTCACCGGCGCCTGCGGCTACGCCAAGTTC
CGCACGCCGTCGGTGCTCGTGCACCCGGTGTTCGGCCACGACCTCGCGCCGTCGCGGCGC
GCCGCCGTCGTCCGCCTCGACGCGCGCGAGGCCGAGCTGCTGTACCGCCGCCGCCTCGGC
TCCGTGGAGTTCTTCCCGCGGGACATCGACGCCGTGCTCTCCAACGCCCTGTCGCTCGGC
ACGTTCCTGGCCGTGCCGCGCGGGACGCGGTGGCGCGGCGTGGAGGGGTTCCTGGCCTCG
CCGCCGGCGTCGTGGGCGGTGGCCAGCCTGTGGAACTGCAAAGACGCGTTCCGCCTCGAG
GTGCGCGGCGCGCCGCGGCTGTGGCGCGCGGCCGCCCGCGCGACGCGCGCCGCCGACCGC
GCCGCGCCGTGGCTGGGCATCCCGTCCATCCCGAACCTGTTCGAGCCGTTCGGCCTCCAC
TTCGTCTACGGCCTCGGCGGCGGCGGCCCCGCGGCGGCGCGCATGGCGCGGGCGCTGTTC
CGGCACGCCCACAACGTGGCGCGGCGCGGCGGGGCGCGCGTGGTGGCCACCGAGGTGGGC
GCGTGCGAGCCGCTCCGCGCCGGCGTGCCGCACTGGCCGCGCCTCGGCGCCGACGACCTC
TGGTGCATCAAGCGGCTGGCCGACGGCTACGGCGACGGCGCGCTCGGCGACTGGAGCAAG
GCGCCGCCGGGAACCTCCATCTTCGTAGACCCAAGGGAGTTTTAGCTT