Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0113700-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:753673:763372:-1 gene:Os07g0113700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os07t0113700-01)
Sequence	ATGGGGTCGGAGCGCGCGGAGCTGGCGAGGGTATGCGGGGGGCGCAACTGGTCCAAGGCC ATCCGCATCCTCGACGCGCACCTCGCCCGCTCCCCGTCCTCCATCCACGACCTCTGCAAC CGGGCCTTCTGCTACTCCCAGCTCGAGCTCCACAAGCACGTCGTCAAGGATTGCGACCGC GCGCTGGAGCTGGACCCGGCGCTGCTCCAGGCCTACGTGCTCAAAGGCAAGGCATTGTCT GCATTAGGGAAAAGAGAGGAAGCTTTGGCTGTTTGGGAGCAAGGACATGAGGTTGCTGTT CGTGATACAATGGACCTGAAACAATTGCTTGAGTTGGAAGAATTGGTTTCCTCTGTTAAA ATCTGTGAGACGATCGAGTGTGAAGACCGTGTCGTGGATGCATCACCATGTGATACCAAA GTTGTTATATCCGAAGATCGTGTTGTTGACACATCATGCACTGCAACTACAATGGCTGAT ACAAAAACTGTTGTTTGTGAAGAAAACATCGGGAACTCTGGAGTTATATCGAATGGTGCT GTGATATTGGCTAATGATAATAAAGCGGACAACAATAAAGAATGCAGCAGTCCAACAAAA GATACAACAGGGACACATCATACTCCCAAGAAAACAACAAAGCCAGATAAGAAAAGCAAA GCAAAAGGTAGAAAAGAAATAAACAGCCAAATCGAAGATGTGGCAGATAGCATAAGTTCC GGTGAAACTGTAGCAGTAGATCAAACACTATTTGCTTCAAAAATATCAAAATCATCAAAA TCCATAAGCTTGGATTTCCGCCTTTCCAGAGGCATTGCACAGGTGAATGAAGGAAGGTAT GACCAAGCAATATCCATTTTTGATCAGATACTGCGAGAAACTCCAACATATCCAGAGGCA CTGATTGGAAGAGGAACAGCTTATGCATTTCAAAGAGAATTGGATTCTGCTATTTCTGAC TTCACCAAGGCTATACAATCAAACCCATCAGCTGGTGAGGCATGGAAGCGGCGGGGACAA GCTCGTGCTGCTTTAGGAGAGTTCACCGAGGCTGTTGAAGACTTGACTAAAGCATTGGAA TTTGAACCAAATTCTCCTGATATTTTACATGAAAGAGGAATTGTGAACTTCAAATTCAAG GACTACAATGCGGCAGTGGAAGATCTCTCAACATGCGTGAAGCGTGACAAGAAAAACAGT TCTGCACACACCTACTTAGGACTAACTCTTTCGGCACTTGGGGAGTACAAACGTGCTGAA GATGAGCATCTCCTTGGCATAAAATATGATGAGAACTTCCTTGACAGTTGGGCTCACCTA TCTCAGCTTTACCTTGATATAGGTTGTCCAGAGAAGATGTTGAATAATGTTGAGAAAGTT CTTCAAATTGATGTCAGCTTTGGAAAAGCATACCATCTACGTGGAATTCTCTACCATGGA ATGGGTAGACATAGGAGTGCTATCAAAGATCTGTCGGTTGCTTTAAAACATGAGAGTTCA AATATAGAGTGCCTATACTTGCGTGCCTCTTGTCATCATGCGATTGGAGAGTACAAGGCC GCGATCAAAGATTATGATGATGTCCTCGACTTGGAGCTTGACTCCATGGATAAATTTGTG CTACAATGTTTGGCCTTCTATCAGAAGGAAATCGCTCTGTATACTGCTTCAAAGGCCAAT TTAGAGTTCTCTCAGTTTAACATTGATGATGATGTTGACCCACTGTTCAAGGAATATTGG TGCAAACGACTGCATCCTAAAAATGTGGCTGAAAAGGTCTATCGGCAACCACCGTTACGG ATCTCACTGAGAAGTGGACGCCTTAACAAGCAAGACTTCAAATTCACAAAGCATCAGACA ACTCTTATCCTAGCTGCAGATTCAATTGGGAAGAAGATACAATATAATTGTCGTGGCTTC TTGCCGAATCAACGCCAGTACCGAATGGCTGGGTTGGCTGCTATTGAGATTGCCCAGAAA GTTTCCAAAGCATGGCGCTTTCTGAGAAATCCAAAGAACAATGCAAAGTTAGTTAGGAGA AGGGATAAGCTTAACGCGTGCCAGAACAGGGGAGGGTATTGCAGCACAAGTACTTTGTCT GGATCACCAACATCCAGTCCAAATGAAGACAGGATTTCCTCTGGAATTTCTCTCTCCTGG CATGATGTCTATAATATTGCTGTTAAATGGAGACAAATTTCTGAACCTTGTGACCCAGTT GTTTGGATCAATAAGCTAAGTGAAGAGTTCAATTCTGGATTTGGTTCTCATACCCCGATG CTTCTAGGCCAAGCAAAAATAATTCGTTACTATCCATATTACCAAAGTGTTTTGGAAGCT GCAAAGAATATCATGCTTGACTTGAAATATGTCAATAATGCGGAGGATCGTGCAATCTTC CTTACAGATATTGAAAAGTTGAAGAAGATAGAAGTTGCATCGTCGTGCTCGGAGTTGTAC CATATAGTTGGTGAGACCTACTGGGTCTCTACTAGATGCGACAGCATTGCATTTCAGGGG AGGCGTCTTGAAGGGACAAGAATTACCACTCAAAACATGGGCAAGACAGGATTCGACTTT GCAATACGAACACCTTGTACACCATCAAGGTGGGAGGAATATGATGAAGAAATGTCTGCA GCTTGGGAGGCCATTTGCGAGGCATATTGTAGTGACACGAACCCGACGCGTGACCCTGAT ATGCTTGATGCTGTGAAGGCAGCAATATTGCGTATGACATATTACTGGTACAACTTCATG CCGCTTTCAAGAGGTTCAGCTGTCGTTGGTTACGTGGTGTTGCTTGGCTTATTTCTGGCA GCAAACATGGATGTCACTGCTAGCATCCCTCATGGGGTTCAGGTAGATTGGGAGGCCATT CTGTCTCAAGATCCTGACACATTTGTTGATAAAATCAAGCCCTGGCTGTATCCATCAATA AAAACAAGCAGGAACCTGAAAGACTATGCAGATGTCAGCGTGGCATTCAGCACCACAGGA TCGGTTGTAGCGGCCTTAACTTGTGTTGACACATGA

Peptide Sequence

PEP ID	Os07t0113700-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:753673:763372:-1 gene:Os07g0113700 transcript:Os07t0113700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os07t0113700-01)
Sequence	MGSERAELARVCGGRNWSKAIRILDAHLARSPSSIHDLCNRAFCYSQLELHKHVVKDCDR ALELDPALLQAYVLKGKALSALGKREEALAVWEQGHEVAVRDTMDLKQLLELEELVSSVK ICETIECEDRVVDASPCDTKVVISEDRVVDTSCTATTMADTKTVVCEENIGNSGVISNGA VILANDNKADNNKECSSPTKDTTGTHHTPKKTTKPDKKSKAKGRKEINSQIEDVADSISS GETVAVDQTLFASKISKSSKSISLDFRLSRGIAQVNEGRYDQAISIFDQILRETPTYPEA LIGRGTAYAFQRELDSAISDFTKAIQSNPSAGEAWKRRGQARAALGEFTEAVEDLTKALE FEPNSPDILHERGIVNFKFKDYNAAVEDLSTCVKRDKKNSSAHTYLGLTLSALGEYKRAE DEHLLGIKYDENFLDSWAHLSQLYLDIGCPEKMLNNVEKVLQIDVSFGKAYHLRGILYHG MGRHRSAIKDLSVALKHESSNIECLYLRASCHHAIGEYKAAIKDYDDVLDLELDSMDKFV LQCLAFYQKEIALYTASKANLEFSQFNIDDDVDPLFKEYWCKRLHPKNVAEKVYRQPPLR ISLRSGRLNKQDFKFTKHQTTLILAADSIGKKIQYNCRGFLPNQRQYRMAGLAAIEIAQK VSKAWRFLRNPKNNAKLVRRRDKLNACQNRGGYCSTSTLSGSPTSSPNEDRISSGISLSW HDVYNIAVKWRQISEPCDPVVWINKLSEEFNSGFGSHTPMLLGQAKIIRYYPYYQSVLEA AKNIMLDLKYVNNAEDRAIFLTDIEKLKKIEVASSCSELYHIVGETYWVSTRCDSIAFQG RRLEGTRITTQNMGKTGFDFAIRTPCTPSRWEEYDEEMSAAWEAICEAYCSDTNPTRDPD MLDAVKAAILRMTYYWYNFMPLSRGSAVVGYVVLLGLFLAANMDVTASIPHGVQVDWEAI LSQDPDTFVDKIKPWLYPSIKTSRNLKDYADVSVAFSTTGSVVAALTCVDT

Transcript Sequence

Transcript ID	Os07t0113700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:753673:763372:-1 gene:Os07g0113700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os07t0113700-01)
Sequence	ACAAATTCACAAATCCATCCTCGCCTCGCCTCCCACCTCTCGTTCCCCTCCCCTTCCCCG GCGACCGGCCGCCGCCGCCGCGCGCCGCCGTCATGGGGTCGGAGCGCGCGGAGCTGGCGA GGGTATGCGGGGGGCGCAACTGGTCCAAGGCCATCCGCATCCTCGACGCGCACCTCGCCC GCTCCCCGTCCTCCATCCACGACCTCTGCAACCGGGCCTTCTGCTACTCCCAGCTCGAGC TCCACAAGCACGTCGTCAAGGATTGCGACCGCGCGCTGGAGCTGGACCCGGCGCTGCTCC AGGCCTACGTGCTCAAAGGCAAGGCATTGTCTGCATTAGGGAAAAGAGAGGAAGCTTTGG CTGTTTGGGAGCAAGGACATGAGGTTGCTGTTCGTGATACAATGGACCTGAAACAATTGC TTGAGTTGGAAGAATTGGTTTCCTCTGTTAAAATCTGTGAGACGATCGAGTGTGAAGACC GTGTCGTGGATGCATCACCATGTGATACCAAAGTTGTTATATCCGAAGATCGTGTTGTTG ACACATCATGCACTGCAACTACAATGGCTGATACAAAAACTGTTGTTTGTGAAGAAAACA TCGGGAACTCTGGAGTTATATCGAATGGTGCTGTGATATTGGCTAATGATAATAAAGCGG ACAACAATAAAGAATGCAGCAGTCCAACAAAAGATACAACAGGGACACATCATACTCCCA AGAAAACAACAAAGCCAGATAAGAAAAGCAAAGCAAAAGGTAGAAAAGAAATAAACAGCC AAATCGAAGATGTGGCAGATAGCATAAGTTCCGGTGAAACTGTAGCAGTAGATCAAACAC TATTTGCTTCAAAAATATCAAAATCATCAAAATCCATAAGCTTGGATTTCCGCCTTTCCA GAGGCATTGCACAGGTGAATGAAGGAAGGTATGACCAAGCAATATCCATTTTTGATCAGA TACTGCGAGAAACTCCAACATATCCAGAGGCACTGATTGGAAGAGGAACAGCTTATGCAT TTCAAAGAGAATTGGATTCTGCTATTTCTGACTTCACCAAGGCTATACAATCAAACCCAT CAGCTGGTGAGGCATGGAAGCGGCGGGGACAAGCTCGTGCTGCTTTAGGAGAGTTCACCG AGGCTGTTGAAGACTTGACTAAAGCATTGGAATTTGAACCAAATTCTCCTGATATTTTAC ATGAAAGAGGAATTGTGAACTTCAAATTCAAGGACTACAATGCGGCAGTGGAAGATCTCT CAACATGCGTGAAGCGTGACAAGAAAAACAGTTCTGCACACACCTACTTAGGACTAACTC TTTCGGCACTTGGGGAGTACAAACGTGCTGAAGATGAGCATCTCCTTGGCATAAAATATG ATGAGAACTTCCTTGACAGTTGGGCTCACCTATCTCAGCTTTACCTTGATATAGGTTGTC CAGAGAAGATGTTGAATAATGTTGAGAAAGTTCTTCAAATTGATGTCAGCTTTGGAAAAG CATACCATCTACGTGGAATTCTCTACCATGGAATGGGTAGACATAGGAGTGCTATCAAAG ATCTGTCGGTTGCTTTAAAACATGAGAGTTCAAATATAGAGTGCCTATACTTGCGTGCCT CTTGTCATCATGCGATTGGAGAGTACAAGGCCGCGATCAAAGATTATGATGATGTCCTCG ACTTGGAGCTTGACTCCATGGATAAATTTGTGCTACAATGTTTGGCCTTCTATCAGAAGG AAATCGCTCTGTATACTGCTTCAAAGGCCAATTTAGAGTTCTCTCAGTTTAACATTGATG ATGATGTTGACCCACTGTTCAAGGAATATTGGTGCAAACGACTGCATCCTAAAAATGTGG CTGAAAAGGTCTATCGGCAACCACCGTTACGGATCTCACTGAGAAGTGGACGCCTTAACA AGCAAGACTTCAAATTCACAAAGCATCAGACAACTCTTATCCTAGCTGCAGATTCAATTG GGAAGAAGATACAATATAATTGTCGTGGCTTCTTGCCGAATCAACGCCAGTACCGAATGG CTGGGTTGGCTGCTATTGAGATTGCCCAGAAAGTTTCCAAAGCATGGCGCTTTCTGAGAA ATCCAAAGAACAATGCAAAGTTAGTTAGGAGAAGGGATAAGCTTAACGCGTGCCAGAACA GGGGAGGGTATTGCAGCACAAGTACTTTGTCTGGATCACCAACATCCAGTCCAAATGAAG ACAGGATTTCCTCTGGAATTTCTCTCTCCTGGCATGATGTCTATAATATTGCTGTTAAAT GGAGACAAATTTCTGAACCTTGTGACCCAGTTGTTTGGATCAATAAGCTAAGTGAAGAGT TCAATTCTGGATTTGGTTCTCATACCCCGATGCTTCTAGGCCAAGCAAAAATAATTCGTT ACTATCCATATTACCAAAGTGTTTTGGAAGCTGCAAAGAATATCATGCTTGACTTGAAAT ATGTCAATAATGCGGAGGATCGTGCAATCTTCCTTACAGATATTGAAAAGTTGAAGAAGA TAGAAGTTGCATCGTCGTGCTCGGAGTTGTACCATATAGTTGGTGAGACCTACTGGGTCT CTACTAGATGCGACAGCATTGCATTTCAGGGGAGGCGTCTTGAAGGGACAAGAATTACCA CTCAAAACATGGGCAAGACAGGATTCGACTTTGCAATACGAACACCTTGTACACCATCAA GGTGGGAGGAATATGATGAAGAAATGTCTGCAGCTTGGGAGGCCATTTGCGAGGCATATT GTAGTGACACGAACCCGACGCGTGACCCTGATATGCTTGATGCTGTGAAGGCAGCAATAT TGCGTATGACATATTACTGGTACAACTTCATGCCGCTTTCAAGAGGTTCAGCTGTCGTTG GTTACGTGGTGTTGCTTGGCTTATTTCTGGCAGCAAACATGGATGTCACTGCTAGCATCC CTCATGGGGTTCAGGTAGATTGGGAGGCCATTCTGTCTCAAGATCCTGACACATTTGTTG ATAAAATCAAGCCCTGGCTGTATCCATCAATAAAAACAAGCAGGAACCTGAAAGACTATG CAGATGTCAGCGTGGCATTCAGCACCACAGGATCGGTTGTAGCGGCCTTAACTTGTGTTG ACACATGAGTTTGATATTGATTTCAGCGGATACTATAGGTTGGCTGAATTGTTAGCGTCT TTGTTTCACCATAATACCCCCATGAACTGTTAAAACAGCTTTGTCTAGATTGTCGAGCAT TTTTCGGTTTGCTACAGTTTTTCAGTTGCTTCATAGAGCTGTATACCTGTATGTTGTAAT GCTGTTTGTTTGACACAATAATGTCATTCTTTTTCCCTTGAACGATGGCTTTGTAATAAT AATTACCAATAATTCATGAAAACGTTTGAC