Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0113500-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:742920:744853:1 gene:Os07g0113500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0113500-00)
Sequence	ATGTCCACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGCAGCCCGTGCTCCCCTCCTCC TCCGCCTCAACCGGAGGCCAGCAGCATGGTGTACTCACGGCTGACCGCGTGGCGGGGCTG CTCACCGGCTGCGCGACCCTCCGCCGAACCGGCGAGCTCCACGCCGCGGCGGTCCGCGCC GGCGTCGACGGCGACCGGGCGGTGGGCTTCCGCCTCCAGCGCGCCTACGCCGCATCCGAC CGCCTCGACCTCACCGTCACGCTCCTCCGCCTCACGCCCGACCCCACCACCGTGTTCTAC ACCTCCGCCATCCACGCCCACTCCTCCCGCGGCCTCCACCTCGCCGCGCTCGCGCTGCTC TCCGAGATGCTGGGTAGGGGGCTCATCCCCACCTCGCACACCCTCTCCTCCTCCCTCCCC GCCTGCCACGGCCTCGCCCTTGGCCGCGCCCTTCACGCCTACGCCTTCAAGCTGGCGCTC GCCGGCGACTCCTACGTCGCCACCGCGCTGCTCGGCATGTACGCGCGCGGGGGCGACGCC GACGCCGCGCGCGCGCTGTTCGACGAAATGCCCGATCCGCACGTCGTGCCAGTCACGGCG ATGCTCACCTGCTACGCCAAGATGGGGGCACTCGACGACGCGCGCGAGCTGTTCGACGGG ATGCCCAGCAAGGACTTCATCTGCTGGAACGCCATGATCGATGGCTACACGCAGCACGGG AGGCCGAACGAGGCGCTCCGGTTGTTCCGGTGGATGCTGCGGTCAGGTGTCGATCCCGAT GAGGTGGCCATCATTCTTGCGCTCTCTGCAGTCGCGCAGCTCGGCACAGCAGAGTCCGGG AGGTGGCTTCATTCCTATGTCAAGAACAGCCGGCGAGTTCAGCTCAATGCCAGGGTTGGC ACGGCGCTCATTGACATGTACTGCAAGTGTGGCAGCCTGGAGGACGCCGTGTCAGTGTTC AACAGCATCGGCGACAAAGACATCGTCGTCTGGAACGCCATGATCAACGGCTACGCGATG CACGGAGATAGCAGGAAGGCACTGGAGATGTTTTCGCAGCTGCGGTCACAAGGCCTCTGG CCAACTGACATCACCTTCATCGGCTTGCTCAATGCCTGCAGCCATTCTGGGCTTGTCGAC GAAGGCCACCAATTCTTCCAATCAATGGAGGAGGAGTACGCCATTGTCCCCAAGATCGAG CACTACGGTTGCATGGTCGATCTCCTCGGTCGTGCCGGGCTCATAGAAGAAGCATTCCAC CTTGTCCAGAGCATGACGATCGCCCCTGACACCGTCATGTGGGTGTCACTGCTCGCCGCG TGCCGGCTTCACAAGAACATGGCGTTAGGCCAGCAGATCGCCGACTATCTCGTCGCCGGT GGACTTGCCAACTCCGGTATGTACATCCTCCTGTCGAACATCTACGCGGCTGTTGGTAAC TGGGAAGAAGTTGCAAGAGTAAGGTCCATGATGAAGGCCAGTGGCATCCAGAAGGAGCCC GGGTGCAGCGCCATCGAGGTCGGCCGCAAGGTCTACGAGTTCGTCGCCGGCGACATGAGC CATCCTCGCACAGATGAGATATACGCCATGCTGGAGAAGATGAACGGGATTGTGAAAGAG CAGGGACATGTTCCACAGACCGAGCTGGTGCTACATGATCTGGATGAGGTGACCAAGGAG AAGGCATTGGCAGTTCACAGCGAGAAGCTCGCCGTTGCGTTTGGGCTCATAAGCACGGCG CCCGGGGAGACGATCAAGATCGTCAAGAACCTGAGGGCGTGCGCCGATTGCCATGCCGTG CTGAAGCTGATATCGAAGATCACTGGGAGGAAGATCGTGTTCAGGGACAGGAACAGGTTT CACCATTTCGTTGATGGGTCATGCACTTGTGGAGATTACTGGTGA

Peptide Sequence

PEP ID	Os07t0113500-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:742920:744853:1 gene:Os07g0113500 transcript:Os07t0113500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0113500-00)
Sequence	MSTAAAAAAAAAVQPVLPSSSASTGGQQHGVLTADRVAGLLTGCATLRRTGELHAAAVRA GVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALL SEMLGRGLIPTSHTLSSSLPACHGLALGRALHAYAFKLALAGDSYVATALLGMYARGGDA DAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHG RPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVG TALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLW PTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFH LVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGN WEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKE QGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAV LKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW

Transcript Sequence

Transcript ID	Os07t0113500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:742920:744853:1 gene:Os07g0113500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0113500-00)
Sequence	CGCCGCCTCCCATGTCCACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGCAGCCCGTGC TCCCCTCCTCCTCCGCCTCAACCGGAGGCCAGCAGCATGGTGTACTCACGGCTGACCGCG TGGCGGGGCTGCTCACCGGCTGCGCGACCCTCCGCCGAACCGGCGAGCTCCACGCCGCGG CGGTCCGCGCCGGCGTCGACGGCGACCGGGCGGTGGGCTTCCGCCTCCAGCGCGCCTACG CCGCATCCGACCGCCTCGACCTCACCGTCACGCTCCTCCGCCTCACGCCCGACCCCACCA CCGTGTTCTACACCTCCGCCATCCACGCCCACTCCTCCCGCGGCCTCCACCTCGCCGCGC TCGCGCTGCTCTCCGAGATGCTGGGTAGGGGGCTCATCCCCACCTCGCACACCCTCTCCT CCTCCCTCCCCGCCTGCCACGGCCTCGCCCTTGGCCGCGCCCTTCACGCCTACGCCTTCA AGCTGGCGCTCGCCGGCGACTCCTACGTCGCCACCGCGCTGCTCGGCATGTACGCGCGCG GGGGCGACGCCGACGCCGCGCGCGCGCTGTTCGACGAAATGCCCGATCCGCACGTCGTGC CAGTCACGGCGATGCTCACCTGCTACGCCAAGATGGGGGCACTCGACGACGCGCGCGAGC TGTTCGACGGGATGCCCAGCAAGGACTTCATCTGCTGGAACGCCATGATCGATGGCTACA CGCAGCACGGGAGGCCGAACGAGGCGCTCCGGTTGTTCCGGTGGATGCTGCGGTCAGGTG TCGATCCCGATGAGGTGGCCATCATTCTTGCGCTCTCTGCAGTCGCGCAGCTCGGCACAG CAGAGTCCGGGAGGTGGCTTCATTCCTATGTCAAGAACAGCCGGCGAGTTCAGCTCAATG CCAGGGTTGGCACGGCGCTCATTGACATGTACTGCAAGTGTGGCAGCCTGGAGGACGCCG TGTCAGTGTTCAACAGCATCGGCGACAAAGACATCGTCGTCTGGAACGCCATGATCAACG GCTACGCGATGCACGGAGATAGCAGGAAGGCACTGGAGATGTTTTCGCAGCTGCGGTCAC AAGGCCTCTGGCCAACTGACATCACCTTCATCGGCTTGCTCAATGCCTGCAGCCATTCTG GGCTTGTCGACGAAGGCCACCAATTCTTCCAATCAATGGAGGAGGAGTACGCCATTGTCC CCAAGATCGAGCACTACGGTTGCATGGTCGATCTCCTCGGTCGTGCCGGGCTCATAGAAG AAGCATTCCACCTTGTCCAGAGCATGACGATCGCCCCTGACACCGTCATGTGGGTGTCAC TGCTCGCCGCGTGCCGGCTTCACAAGAACATGGCGTTAGGCCAGCAGATCGCCGACTATC TCGTCGCCGGTGGACTTGCCAACTCCGGTATGTACATCCTCCTGTCGAACATCTACGCGG CTGTTGGTAACTGGGAAGAAGTTGCAAGAGTAAGGTCCATGATGAAGGCCAGTGGCATCC AGAAGGAGCCCGGGTGCAGCGCCATCGAGGTCGGCCGCAAGGTCTACGAGTTCGTCGCCG GCGACATGAGCCATCCTCGCACAGATGAGATATACGCCATGCTGGAGAAGATGAACGGGA TTGTGAAAGAGCAGGGACATGTTCCACAGACCGAGCTGGTGCTACATGATCTGGATGAGG TGACCAAGGAGAAGGCATTGGCAGTTCACAGCGAGAAGCTCGCCGTTGCGTTTGGGCTCA TAAGCACGGCGCCCGGGGAGACGATCAAGATCGTCAAGAACCTGAGGGCGTGCGCCGATT GCCATGCCGTGCTGAAGCTGATATCGAAGATCACTGGGAGGAAGATCGTGTTCAGGGACA GGAACAGGTTTCACCATTTCGTTGATGGGTCATGCACTTGTGGAGATTACTGGTGATGCC GCCATGGCGTCTCA