Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0112100-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:685467:687222:1 gene:Os07g0112100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to J023132I08, full insert sequence. (Os07t0112100-00)
Sequence

ATGGTGTCCAACCACGACGACGGCAAGCCACCGGCGAAGTGGAAGAAGGTGTGCGTCGTC
GGGGCGGGCATGGCCGGCCTTGCGGCGGCGCGGGAGCTGCGCCGGGAGGGCCACGCCGTG
ACGGTGCTTGAGCAGGCCGGCGACGTGGGCGGGCAGTGGCTGTACGACCCGCGCACCGAC
GACCCGCTCGGCGCGTCCCCGGCGCCGGTGCGCGTGCACAGCAGCATGTACGCGTCGCTC
CGCCTCATCAGCCCCCGCGAGGCCATGGGCTTCACCGACTTCCCCTTCCTCCCCGTCGAC
GGCGCCGGCGGCGGCGGCCGCGACCCGCGCCGCTTCCCCGGCCACCGCGAGGTGCTCCTC
TACCTCAAGGACTTCTGCGACGCGTTCGGCCTCATGGACGCCGTCCGCCTCAGCCTCAAC
ACCAGGGTCCTCCGCGTCGCCATGGCGCCTCCTCAATGTCGCGCCCCCGCCGTCGCCGGC
GGCGAGCGGAAATGGGTGGTCAGGTCCGTACGCGTCGGCGAGCGCGACGACACGGGTGTT
CAGGAAGAGGTGTTCGACGCCGTCGTGGTCGCCACCGGGCACTACTCGCAGCCCAGCGTG
CCAACCATCAAAGGAATGGAGGCGTGGAGGCGGCGGCAGCTGCACAGCCACTCGTACCGG
CTGCCGGAGCCGTTCCGCGACGAGGTGGTTGTCATGGTGGGCTGCGGCGACAGCGGCAAG
GACATCGCGCTGGACCTCATCAGCGTCGCCAAGGAGGTGCACCTCACGGACAAGTCGACG
GAGGAGGCCACGACGCCGGCGATGTCCAAGCTGCTCGCCAAGTACGCCAACCTCCACCTG
AGGCCACGGGTCGAACACCTGTGCGAGGACGGGACGGTGGTGTTCGTCGACGGCTCGCGC
GTCGTCGCCGACACCGTCATGTACTGCACCGGGTACGTCTACTCGTTCCCGTTCCTGGAC
ACGGACGGGGTGGTCACCGTCGACGACAACCGCGTCGGGCCGCTGTTCGAGCACGTGTTC
CCGCCGGCGCTGGCGCCGTCGCTGTCGTTCGTCGGCGTCCCGAGGAAGGTGCCGGCGCCA
TGGTTCTTCGAGGCGCAGGGGAAGTGGGTGGCGCAGGTGCTGTCCGGGAGGAGGACGCTG
CCGCCGGTGGAGGAGATGCTGCGCGCCGTCGACGAGCACTACCGCGCCAGGGCGGCCGCC
GGCGTGCCGGTCAAGTACACGCACGAGCTCGGCGGCATCGAGCCTCAGAAGTACATCGAG
TTCGGGGAGAAGTATTGCGGGTTCCCGCGCTACGAGGATTGGAAGAGGGAGATGATCGTG
TCCACCATCAGTAGGAGGGATGACGACGACATGGAGACATTTCGCGACCGCGTCGACGAC
GACAGTGACCATGTCCGGCTCTGCCTCAAGAGCTGGCACTGCTCATCACCTGCTCGACAT
CAAGCCTCTCTTGCTGTTTCTGCTGCTGATGGCCATCCTCCTCCTCCTCGTCTTGCACAG
ACGGCCAAGGCCATCGCTGCTGATGCTCTGTAG

Peptide Sequence

PEP ID

Os07t0112100-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:685467:687222:1 gene:Os07g0112100 transcript:Os07t0112100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to J023132I08, full insert sequence. (Os07t0112100-00)
Sequence

MVSNHDDGKPPAKWKKVCVVGAGMAGLAAARELRREGHAVTVLEQAGDVGGQWLYDPRTD
DPLGASPAPVRVHSSMYASLRLISPREAMGFTDFPFLPVDGAGGGGRDPRRFPGHREVLL
YLKDFCDAFGLMDAVRLSLNTRVLRVAMAPPQCRAPAVAGGERKWVVRSVRVGERDDTGV
QEEVFDAVVVATGHYSQPSVPTIKGMEAWRRRQLHSHSYRLPEPFRDEVVVMVGCGDSGK
DIALDLISVAKEVHLTDKSTEEATTPAMSKLLAKYANLHLRPRVEHLCEDGTVVFVDGSR
VVADTVMYCTGYVYSFPFLDTDGVVTVDDNRVGPLFEHVFPPALAPSLSFVGVPRKVPAP
WFFEAQGKWVAQVLSGRRTLPPVEEMLRAVDEHYRARAAAGVPVKYTHELGGIEPQKYIE
FGEKYCGFPRYEDWKREMIVSTISRRDDDDMETFRDRVDDDSDHVRLCLKSWHCSSPARH
QASLAVSAADGHPPPPRLAQTAKAIAADAL

Transcript Sequence

Transcript ID

Os07t0112100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:685467:687222:1 gene:Os07g0112100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to J023132I08, full insert sequence. (Os07t0112100-00)
Sequence

GAAGATGGTGTCCAACCACGACGACGGCAAGCCACCGGCGAAGTGGAAGAAGGTGTGCGT
CGTCGGGGCGGGCATGGCCGGCCTTGCGGCGGCGCGGGAGCTGCGCCGGGAGGGCCACGC
CGTGACGGTGCTTGAGCAGGCCGGCGACGTGGGCGGGCAGTGGCTGTACGACCCGCGCAC
CGACGACCCGCTCGGCGCGTCCCCGGCGCCGGTGCGCGTGCACAGCAGCATGTACGCGTC
GCTCCGCCTCATCAGCCCCCGCGAGGCCATGGGCTTCACCGACTTCCCCTTCCTCCCCGT
CGACGGCGCCGGCGGCGGCGGCCGCGACCCGCGCCGCTTCCCCGGCCACCGCGAGGTGCT
CCTCTACCTCAAGGACTTCTGCGACGCGTTCGGCCTCATGGACGCCGTCCGCCTCAGCCT
CAACACCAGGGTCCTCCGCGTCGCCATGGCGCCTCCTCAATGTCGCGCCCCCGCCGTCGC
CGGCGGCGAGCGGAAATGGGTGGTCAGGTCCGTACGCGTCGGCGAGCGCGACGACACGGG
TGTTCAGGAAGAGGTGTTCGACGCCGTCGTGGTCGCCACCGGGCACTACTCGCAGCCCAG
CGTGCCAACCATCAAAGGAATGGAGGCGTGGAGGCGGCGGCAGCTGCACAGCCACTCGTA
CCGGCTGCCGGAGCCGTTCCGCGACGAGGTGGTTGTCATGGTGGGCTGCGGCGACAGCGG
CAAGGACATCGCGCTGGACCTCATCAGCGTCGCCAAGGAGGTGCACCTCACGGACAAGTC
GACGGAGGAGGCCACGACGCCGGCGATGTCCAAGCTGCTCGCCAAGTACGCCAACCTCCA
CCTGAGGCCACGGGTCGAACACCTGTGCGAGGACGGGACGGTGGTGTTCGTCGACGGCTC
GCGCGTCGTCGCCGACACCGTCATGTACTGCACCGGGTACGTCTACTCGTTCCCGTTCCT
GGACACGGACGGGGTGGTCACCGTCGACGACAACCGCGTCGGGCCGCTGTTCGAGCACGT
GTTCCCGCCGGCGCTGGCGCCGTCGCTGTCGTTCGTCGGCGTCCCGAGGAAGGTGCCGGC
GCCATGGTTCTTCGAGGCGCAGGGGAAGTGGGTGGCGCAGGTGCTGTCCGGGAGGAGGAC
GCTGCCGCCGGTGGAGGAGATGCTGCGCGCCGTCGACGAGCACTACCGCGCCAGGGCGGC
CGCCGGCGTGCCGGTCAAGTACACGCACGAGCTCGGCGGCATCGAGCCTCAGAAGTACAT
CGAGTTCGGGGAGAAGTATTGCGGGTTCCCGCGCTACGAGGATTGGAAGAGGGAGATGAT
CGTGTCCACCATCAGTAGGAGGGATGACGACGACATGGAGACATTTCGCGACCGCGTCGA
CGACGACAGTGACCATGTCCGGCTCTGCCTCAAGAGCTGGCACTGCTCATCACCTGCTCG
ACATCAAGCCTCTCTTGCTGTTTCTGCTGCTGATGGCCATCCTCCTCCTCCTCGTCTTGC
ACAGACGGCCAAGGCCATCGCTGCTGATGCTCTGTAG