Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0109500-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:523766:525765:-1 gene:Os07g0109500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L13 family protein. (Os07t0109500-01)
Sequence

ATGGTGTCGGGTTCGGGGCTGTGCACGCGGCGGGTGGTGGTGGACGCGCGGCACCACATG
CTGGGGCGGCTGGCGTCGCTGGTGGCGAAGGAGCTCCTGAACGGGCAGCGGGTGGTGGTG
GTGCGGTGCGAGGAGATGTGCATCTCCGGCGGGCTCGTCCGGCAGAAGATGAAGTACCTC
CGGTTCCTCCGCAAGCGGATGAACACCAAGCCCTCCCATGGCCCCATCCACTTCCGCGCC
CCCTCCCGCATCTTCTGGCGCACCGTCCGCGGCATGATCCCCCACAAGACCCCCCGCGGC
GAGGCCGCCCTCGCCAACCTCAAGGCCTTCGACGGCGTCCCCCCTCCCTACGACCGCACC
AAGCGCATGGTCGTCCCCGACGCCCTCAAGGTTCTTCGCCTCCAGCCCGGCCACAAGTAC
TGCCTCCTCGGCCAGCTCTCCAAGGAGGTCGGCTGGAACTACCACGACACCATCAGGGAA
TTGGAGGAGAAGAGAAAGGAGAAGGCTAAGGTTGCATACGAGAGGAGGAAGCAATTAACA
AGGCTTCGTGTCAAGGCTGAGAAAGCTGCTGAGGAGAAGCTGGGTTCTCAGATAGATATT
TTGGCCCCAATCAAATATTGA

Peptide Sequence

PEP ID

Os07t0109500-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:523766:525765:-1 gene:Os07g0109500 transcript:Os07t0109500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L13 family protein. (Os07t0109500-01)
Sequence

MVSGSGLCTRRVVVDARHHMLGRLASLVAKELLNGQRVVVVRCEEMCISGGLVRQKMKYL
RFLRKRMNTKPSHGPIHFRAPSRIFWRTVRGMIPHKTPRGEAALANLKAFDGVPPPYDRT
KRMVVPDALKVLRLQPGHKYCLLGQLSKEVGWNYHDTIRELEEKRKEKAKVAYERRKQLT
RLRVKAEKAAEEKLGSQIDILAPIKY

Transcript Sequence

Transcript ID

Os07t0109500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:523766:525765:-1 gene:Os07g0109500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L13 family protein. (Os07t0109500-01)
Sequence

GCTTCGCTTCTCCGCAGCCGCCGCCGCCGCCGCCGCGTTCCACCACCTACCACCCCCACC
GGAGAAGAAGAAGAAAAAGGAGAGGAAGATGGTGTCGGGTTCGGGGCTGTGCACGCGGCG
GGTGGTGGTGGACGCGCGGCACCACATGCTGGGGCGGCTGGCGTCGCTGGTGGCGAAGGA
GCTCCTGAACGGGCAGCGGGTGGTGGTGGTGCGGTGCGAGGAGATGTGCATCTCCGGCGG
GCTCGTCCGGCAGAAGATGAAGTACCTCCGGTTCCTCCGCAAGCGGATGAACACCAAGCC
CTCCCATGGCCCCATCCACTTCCGCGCCCCCTCCCGCATCTTCTGGCGCACCGTCCGCGG
CATGATCCCCCACAAGACCCCCCGCGGCGAGGCCGCCCTCGCCAACCTCAAGGCCTTCGA
CGGCGTCCCCCCTCCCTACGACCGCACCAAGCGCATGGTCGTCCCCGACGCCCTCAAGGT
TCTTCGCCTCCAGCCCGGCCACAAGTACTGCCTCCTCGGCCAGCTCTCCAAGGAGGTCGG
CTGGAACTACCACGACACCATCAGGGAATTGGAGGAGAAGAGAAAGGAGAAGGCTAAGGT
TGCATACGAGAGGAGGAAGCAATTAACAAGGCTTCGTGTCAAGGCTGAGAAAGCTGCTGA
GGAGAAGCTGGGTTCTCAGATAGATATTTTGGCCCCAATCAAATATTGATTGGCCTGATT
GTCATCAATTTTCTTTTCGCCTTTATAATATTTCTGCTTATCGGTACCATGAGAAGTGAA
ATGATATGTCTGTCGAAACATGATAATTTTGTTCCAATTGAATACTAGAGAGTTATATTG
GCTTGATCTGATTTTCCCTCTTG