Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0106200-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:349231:353686:-1 gene:Os07g0106200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:monosaccharide transporter 3 description:Similar to Hexose transporter. (Os07t0106200-02);Similar to Monosaccharide transporter 3. (Os07t0106200-03)
Sequence

ATGGCCGGCGGCGCGGTGGTGAGCACGGGGGCAGGCAAGGACTACCCTGGCAAGCTCACC
CTCTTCGTCTTCTTCACATGCGTCGTCGCCGCCACCGGTGGTCTCATCTTCGGATATGAC
ATCGGTATATCAGGTGGTGTGACGTCCATGGACCCGTTCCTGAGGAAGTTCTTCCCGGAG
GTGTATCGGAAGAAGCAGATGGCGGACAAGAACAACCAGTACTGCAAGTACGACAACCAG
CTGCTGCAGACCTTCACCTCGTCGCTCTACCTCGCCGCCCTCGTCTCCTCCTTCTTCGCC
GCCACCGTCACCCGCGTCCTCGGCCGCAAGTGGTCCATGTTCGCCGGCGGCCTCACCTTC
CTCATCGGCGCCGCCCTCAACGGCGCCGCCGAGAACGTCGCCATGCTCATCGTCGGTCGT
ATCCTCCTCGGTGTCGGCGTCGGCTTCGCCAATCAGTCGGTGCCGGTGTACTTGTCGGAG
ATGGCGCCGGCTCGGCTGCGGGGGATGCTGAACATCGGGTTCCAGCTGATGATCACCATC
GGCATCCTGGCGGCGGAGCTGATAAACTACGGGACGGCGAAGATCAAGGCCGGGTGGGGA
TGGCGGGTGAGCCTGGCGCTGGCCGCCGTCCCCGCCGCCATCATCACCCTCGGCTCCCTC
TTCCTCCCGGACACCCCCAACTCGCTCATCGACAGGGGCCACCCGGAGGCGGCGGAGCGC
ATGCTCCGGCGCATCCGCGGCTCCGACGTGGACGTGTCGGAGGAGTACGCGGACCTGGTG
GCGGCGAGCGAGGAGTCGAAGCTGGTGCAGCACCCGTGGCGCAACATCCTCCGCCGCAAG
TACCGCGCCCAGCTCACCATGGCCATCTGCATCCCCTTCTTCCAGCAGCTCACCGGGATC
AACGTCATCATGTTCTACGCCCCCGTGCTGTTCGACACCCTGGGCTTCAAGAGCGACGCG
TCGCTCATGTCCGCCGTCATCACGGGCCTCGTCAACGTCTTCGCCACGCTGGTGTCCATC
TTCACCGTGGACCGCCTCGGCCGCCGCAAGCTGTTCCTGCAGGGCGGGGCGCAGATGGTG
GTGTGCCAGGTGGTGGTGGGGACGCTGATCGCCGTCAAGTTCGGGACGAGCGGCATCGGC
GACATCCCCAAGGGGTACGCGGCGGTGGTGGTGCTCTTCATCTGCATGTACGTGGCAGGG
TTCGCGTGGTCGTGGGGCCCACTGGGGTGGCTCGTCCCCAGCGAGATCTTCCCGCTGGAG
ATCCGGCCGGCGGGGCAGAGCATCAACGTGTCGGTGAACATGCTCTTCACCTTCGTCATC
GCGCAGGCCTTCCTCACCATGCTCTGCCACATGAAGTTCGGCCTCTTCTACTTCTTCGCC
GGATGGGTCGTCATCATGACCGTCTTCATCGCCCTCTTCCTCCCCGAGACCAAGAACGTC
CCCATCGAGGAGATGGTGCTCGTCTGGAAGTCCCACTGGTTCTGGCGCCGATTCATCGGA
GACCACGACGTCCACGTCGGCGCCAACCACGTCTCCAACAATAAGCTCCAACCATAA

Peptide Sequence

PEP ID

Os07t0106200-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:349231:353686:-1 gene:Os07g0106200 transcript:Os07t0106200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:monosaccharide transporter 3 description:Similar to Hexose transporter. (Os07t0106200-02);Similar to Monosaccharide transporter 3. (Os07t0106200-03)
Sequence

MAGGAVVSTGAGKDYPGKLTLFVFFTCVVAATGGLIFGYDIGISGGVTSMDPFLRKFFPE
VYRKKQMADKNNQYCKYDNQLLQTFTSSLYLAALVSSFFAATVTRVLGRKWSMFAGGLTF
LIGAALNGAAENVAMLIVGRILLGVGVGFANQSVPVYLSEMAPARLRGMLNIGFQLMITI
GILAAELINYGTAKIKAGWGWRVSLALAAVPAAIITLGSLFLPDTPNSLIDRGHPEAAER
MLRRIRGSDVDVSEEYADLVAASEESKLVQHPWRNILRRKYRAQLTMAICIPFFQQLTGI
NVIMFYAPVLFDTLGFKSDASLMSAVITGLVNVFATLVSIFTVDRLGRRKLFLQGGAQMV
VCQVVVGTLIAVKFGTSGIGDIPKGYAAVVVLFICMYVAGFAWSWGPLGWLVPSEIFPLE
IRPAGQSINVSVNMLFTFVIAQAFLTMLCHMKFGLFYFFAGWVVIMTVFIALFLPETKNV
PIEEMVLVWKSHWFWRRFIGDHDVHVGANHVSNNKLQP

Transcript Sequence

Transcript ID

Os07t0106200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:349231:353686:-1 gene:Os07g0106200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:monosaccharide transporter 3 description:Similar to Hexose transporter. (Os07t0106200-02);Similar to Monosaccharide transporter 3. (Os07t0106200-03)
Sequence

ATCCCTCTTCTTTGTCTGATCGATCGATTGCTTCTCCCTCCTCTCGCTACTAGACTAGAG
AGTAGGTAGAGCTAGCTTTCTAGCTCGTGGATCGTTAAGTTTGTAGTCCTGCCCGGGCGC
CGGCGGTGAGGTCGCGATGGCCGGCGGCGCGGTGGTGAGCACGGGGGCAGGCAAGGACTA
CCCTGGCAAGCTCACCCTCTTCGTCTTCTTCACATGCGTCGTCGCCGCCACCGGTGGTCT
CATCTTCGGATATGACATCGGTATATCAGGTGGTGTGACGTCCATGGACCCGTTCCTGAG
GAAGTTCTTCCCGGAGGTGTATCGGAAGAAGCAGATGGCGGACAAGAACAACCAGTACTG
CAAGTACGACAACCAGCTGCTGCAGACCTTCACCTCGTCGCTCTACCTCGCCGCCCTCGT
CTCCTCCTTCTTCGCCGCCACCGTCACCCGCGTCCTCGGCCGCAAGTGGTCCATGTTCGC
CGGCGGCCTCACCTTCCTCATCGGCGCCGCCCTCAACGGCGCCGCCGAGAACGTCGCCAT
GCTCATCGTCGGTCGTATCCTCCTCGGTGTCGGCGTCGGCTTCGCCAATCAGTCGGTGCC
GGTGTACTTGTCGGAGATGGCGCCGGCTCGGCTGCGGGGGATGCTGAACATCGGGTTCCA
GCTGATGATCACCATCGGCATCCTGGCGGCGGAGCTGATAAACTACGGGACGGCGAAGAT
CAAGGCCGGGTGGGGATGGCGGGTGAGCCTGGCGCTGGCCGCCGTCCCCGCCGCCATCAT
CACCCTCGGCTCCCTCTTCCTCCCGGACACCCCCAACTCGCTCATCGACAGGGGCCACCC
GGAGGCGGCGGAGCGCATGCTCCGGCGCATCCGCGGCTCCGACGTGGACGTGTCGGAGGA
GTACGCGGACCTGGTGGCGGCGAGCGAGGAGTCGAAGCTGGTGCAGCACCCGTGGCGCAA
CATCCTCCGCCGCAAGTACCGCGCCCAGCTCACCATGGCCATCTGCATCCCCTTCTTCCA
GCAGCTCACCGGGATCAACGTCATCATGTTCTACGCCCCCGTGCTGTTCGACACCCTGGG
CTTCAAGAGCGACGCGTCGCTCATGTCCGCCGTCATCACGGGCCTCGTCAACGTCTTCGC
CACGCTGGTGTCCATCTTCACCGTGGACCGCCTCGGCCGCCGCAAGCTGTTCCTGCAGGG
CGGGGCGCAGATGGTGGTGTGCCAGGTGGTGGTGGGGACGCTGATCGCCGTCAAGTTCGG
GACGAGCGGCATCGGCGACATCCCCAAGGGGTACGCGGCGGTGGTGGTGCTCTTCATCTG
CATGTACGTGGCAGGGTTCGCGTGGTCGTGGGGCCCACTGGGGTGGCTCGTCCCCAGCGA
GATCTTCCCGCTGGAGATCCGGCCGGCGGGGCAGAGCATCAACGTGTCGGTGAACATGCT
CTTCACCTTCGTCATCGCGCAGGCCTTCCTCACCATGCTCTGCCACATGAAGTTCGGCCT
CTTCTACTTCTTCGCCGGATGGGTCGTCATCATGACCGTCTTCATCGCCCTCTTCCTCCC
CGAGACCAAGAACGTCCCCATCGAGGAGATGGTGCTCGTCTGGAAGTCCCACTGGTTCTG
GCGCCGATTCATCGGAGACCACGACGTCCACGTCGGCGCCAACCACGTCTCCAACAATAA
GCTCCAACCATAATCCGCTCACGAATATCGTCGTCCATGTCTCCGTCACGCCCTATATTC
TTCTTCTTGTGTTCATCCCCGTGTACAGTAGATGCCTTTTATTAGTTTGTTTTGTTTTGC
CTAGTCAGTCTTCAATCTTAATGTACGTGTGTTTCTTGTTTGGCCAAATTGATCTTAATT
GCTGTACCTTTCACTGTCAAAGAGCGTCCCTTGTTACCATT