Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0106100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:343935:349227:1 gene:Os07g0106100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, SDS22 containing protein. (Os07t0106100-01)
Sequence	ATGGTTAGGTTTTTCTGCTTCTCATCCTCGACCAGTACCACACATCATAGGGCAAAGGAA CACTTTCTGCCAGCTGAACAAGTCATTCTCGGTGCTTCACAGAAGGATACCATGCTTGCT GTTTCACAGATGGATTCTCAGGATCAAACAGTGAAGTCCAACGCTGGATCAGCAAGTCCA AACCAGTTGACAGATGTAAATGATCATTCAAATGTTAGCCGGCAGTATGATACTAGCCCA TCGTCTCATCAAGAATGCTGGAGATCTGAAGACTTGAACAGATATGCATGCTCTGATGAC AGTAAGGAGTCTGGCCACCTAAAGAAGAGCCTATCTCTTGGAAACATGCTTCACAAGGAT CATGATCATCATTTTAGTGAAGGTGCTGAATGTGATATTATTGACTGTGACCACAAAGGC CATTGCTCTAGTTTGAAAAGCAATTCAGCTGTTGGAGATTCTGCTAAGTTAAACACTAAG GGCAATGAGAATGCTTTTGATGCCTTGTCTGACTTGGTCAGTCCTTCAGGTGACCATGTT GTTGACTCTGATAGCCACTACCTGTGTTATGACCAGACCAAATTTCCAAGATCACAATCT GCTATATTTCAGAATAATTCCAATTGTGGTACAGAAGGTTCTGCTGATTCTGAGATACTA GGGCCTCGTTGCAGGTCTTATGAAGATCTGTGTTCAGCGGTTAGTGAGAAGGTTGATTAT CTGAATAGCGATCTGTGTTCAGCGGTTAGTGAGAAGGTTGATTATCTGAATAGCGTCGAG CCACATCACTCTAAATCAAATTTGGATGTGCATTGTGCTGGACCTTCTTCTCCAGATGTC TATGAAAGAATGAACTTTGAGGACAATGGTTCAATAGGTTGTTCTGATGCTGCTGATGGG GGTCAAAGGTCTACTGCAAGTGCAGAAGAAAGTTTTGTTAGGGATGGGATGCTAAGTCAT GAATATTGGGATAACAAATATGTGAGCGGTCACCAATCAGTTGATCCAGTTGCCCCCTAC TACTCTGGTACAGGGGATGGTTCTCACCATTCCAACAATGACGGTGGCATCAATGAAGCT CTAGATCAAGAGAGAAAAGATAACTTGTGGAACAGAGATAGCACTCCCTACCACAAATCA CTTGTCATTGATGCGAGTGATCTAAAGTTGTGTGATTCAAAGGATATTAGTGAAGAACTC AAGCACAACAGAACTGGAATTAATGACAACCAGTATTTCGATGTGGACCCAGATGAACTT TCCCCAAGAACTTTTAGCATTAAAAGAATTGAGGATTGGATCAACCAAATTGATATTGAC GATGGCACCCTTGTCGAGGAGCAAGGAGAAAGTTCAAACTCGGTGTTGACAAAATATAAT GAGCCGGTGGCTGGTGTTCCTGCTGTCCGGCCTGATGCTAAAAGTCCTCTTGGCATGGAG ATAGCTTACACTTATATTTCGAAATTGACTCCGACTTCTTCGTCGGCACAATTAGGAAAC CTTGGCTTGGTTGCAATTCCAAGATTGAGCGCTTTCTTAGGCCTACGCTTGTTGAACTTG TCTGGGAATTCAATTGTGCGAATAACTGCAGGGGCTCTTCCAAGGGGTCTTCACATGTTA AGCTTGTCAAAGAATAATATCTCAACAATTGAGGGCCTTAGAGAATTGACACGCTTACGC TTACTGGACATCAGCTATAATAGGATATCCAGAATTGGCCATGGTTTGGCGTCCTGTTCT TCTTTGAAGGAGTTGTATCTGGGTGGTAACAAGATCAGTGAGGTAGATGGTCTTCACCGT CTTCTGAAGCTAAAGGTTCTGGACCTGCGCCACAACAAGATCTCCACATCGAAGGGGCTT GGTCAGCTGGCTGCAAACTATAGTTCTCTTGAAGCCGTAAACCTAGATGGGAACCCAGCG CAGAAGAATGTAGGTGATGAGCACCTGAAGAAGTACCTTGTAGGTCTCCTGCCAAACCTT GGTTTCTACAACAAGCATCCTATAAGAGCATCTGGCTCAAAAGAGGTATCGGACCGGCAC ACCCGCAAGATTTCTTCTTCCCATCGTTCCGATCGCAGCGGTAGATCGGATCGTAAATCC TCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCACAGAGTTCACGGCATGCGCGTTCT GGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAAGGGGCCGAAGCATGGCGGTGGCAGCT TCAGGGCCTAGACTGATGGAATATGGCGGTGCCGGGGATGTTCAGATCGAGAGAAAGGCT CAGTAA

Peptide Sequence

PEP ID	Os07t0106100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:343935:349227:1 gene:Os07g0106100 transcript:Os07t0106100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, SDS22 containing protein. (Os07t0106100-01)
Sequence	MVRFFCFSSSTSTTHHRAKEHFLPAEQVILGASQKDTMLAVSQMDSQDQTVKSNAGSASP NQLTDVNDHSNVSRQYDTSPSSHQECWRSEDLNRYACSDDSKESGHLKKSLSLGNMLHKD HDHHFSEGAECDIIDCDHKGHCSSLKSNSAVGDSAKLNTKGNENAFDALSDLVSPSGDHV VDSDSHYLCYDQTKFPRSQSAIFQNNSNCGTEGSADSEILGPRCRSYEDLCSAVSEKVDY LNSDLCSAVSEKVDYLNSVEPHHSKSNLDVHCAGPSSPDVYERMNFEDNGSIGCSDAADG GQRSTASAEESFVRDGMLSHEYWDNKYVSGHQSVDPVAPYYSGTGDGSHHSNNDGGINEA LDQERKDNLWNRDSTPYHKSLVIDASDLKLCDSKDISEELKHNRTGINDNQYFDVDPDEL SPRTFSIKRIEDWINQIDIDDGTLVEEQGESSNSVLTKYNEPVAGVPAVRPDAKSPLGME IAYTYISKLTPTSSSAQLGNLGLVAIPRLSAFLGLRLLNLSGNSIVRITAGALPRGLHML SLSKNNISTIEGLRELTRLRLLDISYNRISRIGHGLASCSSLKELYLGGNKISEVDGLHR LLKLKVLDLRHNKISTSKGLGQLAANYSSLEAVNLDGNPAQKNVGDEHLKKYLVGLLPNL GFYNKHPIRASGSKEVSDRHTRKISSSHRSDRSGRSDRKSSRLVASTSSYKAQSSRHARS GHASSSFLKNPRGRSMAVAASGPRLMEYGGAGDVQIERKAQ

Transcript Sequence

Transcript ID	Os07t0106100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:343935:349227:1 gene:Os07g0106100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, SDS22 containing protein. (Os07t0106100-01)
Sequence	ACCCGGTCGGTCTCCAAGTCCCAAACAAGAAGAAGGAGCAGCAGCAGCGAGAGAGAGAGA GAGAGAGATTGATAATTACAGATCCAATCACAGGTGAGGTAGGTTCTCCTGACTCTCTTC GCCGCAGCGCACACCACCCCAACTAGCTCCTAGCCATTAGAGCCGGATTCTTTTCTGGAC GGACAAGGCGGAGAGGGAAGAAGAAGGATTGTGCCAACCATATGCATCCTTCTGGAATTA TCTAGTTCCTTAATCTTTCGTCCAGCCTGGCAGATATCAAGAGGTCAGGCACATCTCGCA CCTCTAAGTGGGTGTGGGTTTGCAACTACTCTGCAACCAACTTAACCTCGCCTCTGGGGA AAAGCCCGTCTTACATCTGGAGACTACGCCGAGCATTGGAGGGTCTTTTCGATTATGGTT AATTTCCAACAATAGTTGAGATGTAACACGTTTGCTGAACTGAGTTCTCATCGAAGGTAG TCCTTTGATATAGCAATGTGATTGGGTCGACTCTGTTTGTGTTGTACTTGTGATTGCCAT CAGAGTTGACTTATGGTTAGGTTTTTCTGCTTCTCATCCTCGACCAGTACCACACATCAT AGGGCAAAGGAACACTTTCTGCCAGCTGAACAAGTCATTCTCGGTGCTTCACAGAAGGAT ACCATGCTTGCTGTTTCACAGATGGATTCTCAGGATCAAACAGTGAAGTCCAACGCTGGA TCAGCAAGTCCAAACCAGTTGACAGATGTAAATGATCATTCAAATGTTAGCCGGCAGTAT GATACTAGCCCATCGTCTCATCAAGAATGCTGGAGATCTGAAGACTTGAACAGATATGCA TGCTCTGATGACAGTAAGGAGTCTGGCCACCTAAAGAAGAGCCTATCTCTTGGAAACATG CTTCACAAGGATCATGATCATCATTTTAGTGAAGGTGCTGAATGTGATATTATTGACTGT GACCACAAAGGCCATTGCTCTAGTTTGAAAAGCAATTCAGCTGTTGGAGATTCTGCTAAG TTAAACACTAAGGGCAATGAGAATGCTTTTGATGCCTTGTCTGACTTGGTCAGTCCTTCA GGTGACCATGTTGTTGACTCTGATAGCCACTACCTGTGTTATGACCAGACCAAATTTCCA AGATCACAATCTGCTATATTTCAGAATAATTCCAATTGTGGTACAGAAGGTTCTGCTGAT TCTGAGATACTAGGGCCTCGTTGCAGGTCTTATGAAGATCTGTGTTCAGCGGTTAGTGAG AAGGTTGATTATCTGAATAGCGATCTGTGTTCAGCGGTTAGTGAGAAGGTTGATTATCTG AATAGCGTCGAGCCACATCACTCTAAATCAAATTTGGATGTGCATTGTGCTGGACCTTCT TCTCCAGATGTCTATGAAAGAATGAACTTTGAGGACAATGGTTCAATAGGTTGTTCTGAT GCTGCTGATGGGGGTCAAAGGTCTACTGCAAGTGCAGAAGAAAGTTTTGTTAGGGATGGG ATGCTAAGTCATGAATATTGGGATAACAAATATGTGAGCGGTCACCAATCAGTTGATCCA GTTGCCCCCTACTACTCTGGTACAGGGGATGGTTCTCACCATTCCAACAATGACGGTGGC ATCAATGAAGCTCTAGATCAAGAGAGAAAAGATAACTTGTGGAACAGAGATAGCACTCCC TACCACAAATCACTTGTCATTGATGCGAGTGATCTAAAGTTGTGTGATTCAAAGGATATT AGTGAAGAACTCAAGCACAACAGAACTGGAATTAATGACAACCAGTATTTCGATGTGGAC CCAGATGAACTTTCCCCAAGAACTTTTAGCATTAAAAGAATTGAGGATTGGATCAACCAA ATTGATATTGACGATGGCACCCTTGTCGAGGAGCAAGGAGAAAGTTCAAACTCGGTGTTG ACAAAATATAATGAGCCGGTGGCTGGTGTTCCTGCTGTCCGGCCTGATGCTAAAAGTCCT CTTGGCATGGAGATAGCTTACACTTATATTTCGAAATTGACTCCGACTTCTTCGTCGGCA CAATTAGGAAACCTTGGCTTGGTTGCAATTCCAAGATTGAGCGCTTTCTTAGGCCTACGC TTGTTGAACTTGTCTGGGAATTCAATTGTGCGAATAACTGCAGGGGCTCTTCCAAGGGGT CTTCACATGTTAAGCTTGTCAAAGAATAATATCTCAACAATTGAGGGCCTTAGAGAATTG ACACGCTTACGCTTACTGGACATCAGCTATAATAGGATATCCAGAATTGGCCATGGTTTG GCGTCCTGTTCTTCTTTGAAGGAGTTGTATCTGGGTGGTAACAAGATCAGTGAGGTAGAT GGTCTTCACCGTCTTCTGAAGCTAAAGGTTCTGGACCTGCGCCACAACAAGATCTCCACA TCGAAGGGGCTTGGTCAGCTGGCTGCAAACTATAGTTCTCTTGAAGCCGTAAACCTAGAT GGGAACCCAGCGCAGAAGAATGTAGGTGATGAGCACCTGAAGAAGTACCTTGTAGGTCTC CTGCCAAACCTTGGTTTCTACAACAAGCATCCTATAAGAGCATCTGGCTCAAAAGAGGTA TCGGACCGGCACACCCGCAAGATTTCTTCTTCCCATCGTTCCGATCGCAGCGGTAGATCG GATCGTAAATCCTCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCACAGAGTTCACGG CATGCGCGTTCTGGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAAGGGGCCGAAGCATG GCGGTGGCAGCTTCAGGGCCTAGACTGATGGAATATGGCGGTGCCGGGGATGTTCAGATC GAGAGAAAGGCTCAGTAATAAGTTTTTCAGACTGCCAATGCTCTCTCCTGTTTTCTTTTA ATTTGTTGGTAAATAAAGCTCAAACAATATGCTGAGTTTCAGCTGCAGCAGCAGTTCGTA TGATATGTTTTCCTAGATGGTGTTGAGTAGTATTACATTGGAAGACAAATGGTGATTGTG TTGAATAATTCATTGCTGACTAATGAGGAACAAAACAATATTTAGATGGGCACCCTGTAC ACACTCTGCTAATGTTATTCTTGCTGTACATACAGAGTGAAATTAATTGATTAATCTTTC CGTGT