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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0105600-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:306054:306968:1 gene:Os07g0105600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II oxygen evolving complex protein PsbQ family protein. (Os07t0105600-01)
Sequence

ATGGCCACTTATCTCCAATCAGCAGGCCTCACCGCCGCCACTGCCAGCACCAGCCGCCTC
CTCCGGCCAACACCACGGAGGCTGCTCCTCCTCGTGGCGGCGTGCTCCACTGGCGGACGG
AGATCAGCCTGCCTCTCCGTCGGCCTCGCAGCCGCCGCCGCCACCATCTTCCAGCATCAT
CCCGCCTGCGCCGCCACCGACGACGAGCCGGCAAACAATGGGTGGTGGCTCACCGAGTTC
CCTTTGCCGGTGCCAAAGATTGTCAACAAGGAGCTGAACAATGGCGAGACGGGGAGCCGG
ACGTTCGTGAGGAACGGCATCTACATAGCCGACATCGGGCCGAGCTACGCGGCGCACGCG
TACAGGCTGCGGAGCACGGCGTTCGACCTGCTGGCGCTGGAGGACCTGCTGGGCAACAAC
GCCGACAGGGCCAACTACGTCACCAAGTACCTCCGCCTCAAGTCCACCTTCATGTACTTC
GACTTCGACAAGCTCATCTCCGCCGCCTCCGACGACCAGCGCCCCCCGCTGCTCGACCTC
GCCACCCGCCTCTTCGACAGCTTCGAGCGCCTCCAGAAGGCCTGCGGCACCAAGGACGAC
ACCCAGATCGGCTCCTCCTATGCCGACACCAAGATCATCCTCCAGGAGGTCATGGCAAAG
ATGGCCTAG

Peptide Sequence

PEP ID

Os07t0105600-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:306054:306968:1 gene:Os07g0105600 transcript:Os07t0105600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II oxygen evolving complex protein PsbQ family protein. (Os07t0105600-01)
Sequence

MATYLQSAGLTAATASTSRLLRPTPRRLLLLVAACSTGGRRSACLSVGLAAAAATIFQHH
PACAATDDEPANNGWWLTEFPLPVPKIVNKELNNGETGSRTFVRNGIYIADIGPSYAAHA
YRLRSTAFDLLALEDLLGNNADRANYVTKYLRLKSTFMYFDFDKLISAASDDQRPPLLDL
ATRLFDSFERLQKACGTKDDTQIGSSYADTKIILQEVMAKMA

Transcript Sequence

Transcript ID

Os07t0105600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:306054:306968:1 gene:Os07g0105600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem II oxygen evolving complex protein PsbQ family protein. (Os07t0105600-01)
Sequence

TTCCCTTGCTACACTGACACACATCCTCGATGGCCACTTATCTCCAATCAGCAGGCCTCA
CCGCCGCCACTGCCAGCACCAGCCGCCTCCTCCGGCCAACACCACGGAGGCTGCTCCTCC
TCGTGGCGGCGTGCTCCACTGGCGGACGGAGATCAGCCTGCCTCTCCGTCGGCCTCGCAG
CCGCCGCCGCCACCATCTTCCAGCATCATCCCGCCTGCGCCGCCACCGACGACGAGCCGG
CAAACAATGGGTGGTGGCTCACCGAGTTCCCTTTGCCGGTGCCAAAGATTGTCAACAAGG
AGCTGAACAATGGCGAGACGGGGAGCCGGACGTTCGTGAGGAACGGCATCTACATAGCCG
ACATCGGGCCGAGCTACGCGGCGCACGCGTACAGGCTGCGGAGCACGGCGTTCGACCTGC
TGGCGCTGGAGGACCTGCTGGGCAACAACGCCGACAGGGCCAACTACGTCACCAAGTACC
TCCGCCTCAAGTCCACCTTCATGTACTTCGACTTCGACAAGCTCATCTCCGCCGCCTCCG
ACGACCAGCGCCCCCCGCTGCTCGACCTCGCCACCCGCCTCTTCGACAGCTTCGAGCGCC
TCCAGAAGGCCTGCGGCACCAAGGACGACACCCAGATCGGCTCCTCCTATGCCGACACCA
AGATCATCCTCCAGGAGGTCATGGCAAAGATGGCCTAGTGTTTCTGTTGGTGTACTAGCT
AGTACTGTATTTCTCTCACTTTACTTGTCATACATACATATATATATATATATATATAT